RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 EYA1Q99502 592 aa15.47■□□□□ 0.07
SNHG1-206ENST00000537925 MARCH10Q8NA82 808 aaPredicted RBP15.46■□□□□ 0.07
SNHG1-206ENST00000537925 PARD3Q8TEW0 1356 aa15.46■□□□□ 0.07
SNHG1-206ENST00000537925 COL3A1P02461 1466 aaPredicted RBP15.46■□□□□ 0.07
SNHG1-206ENST00000537925 FAM196AQ6ZSG2 479 aa15.46■□□□□ 0.06
SNHG1-206ENST00000537925 CCDC125Q86Z20 511 aa15.46■□□□□ 0.06
SNHG1-206ENST00000537925 IGSF1Q8N6C5 1336 aa15.45■□□□□ 0.06
SNHG1-206ENST00000537925 BCL9O00512 1426 aa15.45■□□□□ 0.06
SNHG1-206ENST00000537925 IL13P35225 146 aa15.45■□□□□ 0.06
SNHG1-206ENST00000537925 PPP2R1AP30153 589 aa15.44■□□□□ 0.06
SNHG1-206ENST00000537925 RAPGEF4Q8WZA2 1011 aa15.44■□□□□ 0.06
SNHG1-206ENST00000537925 TATP17735 454 aaPredicted RBP15.43■□□□□ 0.06
SNHG1-206ENST00000537925 NHSQ6T4R5 1651 aa15.43■□□□□ 0.06
SNHG1-206ENST00000537925 PLEKHG2Q9H7P9 1386 aa15.42■□□□□ 0.06
SNHG1-206ENST00000537925 DOT1LQ8TEK3 1739 aa15.42■□□□□ 0.06
SNHG1-206ENST00000537925 KDRP35968 1356 aa15.41■□□□□ 0.06
SNHG1-206ENST00000537925 ZCRB1Q8TBF4 217 aaKnown RBP15.41■□□□□ 0.06
SNHG1-206ENST00000537925 VIRMAQ69YN4 1812 aaKnown RBP15.41■□□□□ 0.06
SNHG1-206ENST00000537925 RGPD3A6NKT7 1758 aaPredicted RBP15.4■□□□□ 0.06
SNHG1-206ENST00000537925 RGPD4Q7Z3J3 1758 aa15.4■□□□□ 0.06
SNHG1-206ENST00000537925 DIAPH1O60610 1272 aaKnown RBP15.4■□□□□ 0.06
SNHG1-206ENST00000537925 BTAF1O14981 1849 aa15.4■□□□□ 0.06
SNHG1-206ENST00000537925 ITGB4P16144 1822 aa15.4■□□□□ 0.06
SNHG1-206ENST00000537925 TRIM37O94972 964 aa15.39■□□□□ 0.05
SNHG1-206ENST00000537925 RALBP1Q15311 655 aa15.39■□□□□ 0.05
SNHG1-206ENST00000537925 DDX54Q8TDD1 881 aaKnown RBP15.39■□□□□ 0.05
SNHG1-206ENST00000537925 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.39■□□□□ 0.05
SNHG1-206ENST00000537925 TOGARAM1Q9Y4F4 1720 aa15.38■□□□□ 0.05
SNHG1-206ENST00000537925 SF3B2Q13435 895 aaKnown RBP15.38■□□□□ 0.05
SNHG1-206ENST00000537925 SULT6B1Q6IMI4 303 aa15.38■□□□□ 0.05
SNHG1-206ENST00000537925 AEBP1Q8IUX7 1158 aa15.38■□□□□ 0.05
SNHG1-206ENST00000537925 CFAP53Q96M91 514 aa15.38■□□□□ 0.05
SNHG1-206ENST00000537925 PCDH11XQ9BZA7 1347 aa15.37■□□□□ 0.05
SNHG1-206ENST00000537925 PCDH11YQ9BZA8 1340 aa15.37■□□□□ 0.05
SNHG1-206ENST00000537925 RREB1Q92766 1687 aa15.36■□□□□ 0.05
SNHG1-206ENST00000537925 SPG7Q9UQ90 795 aa15.36■□□□□ 0.05
SNHG1-206ENST00000537925 CYP27B1O15528 508 aa15.35■□□□□ 0.05
SNHG1-206ENST00000537925 DEFB132Q7Z7B7 95 aa15.35■□□□□ 0.05
SNHG1-206ENST00000537925 BCL11BQ9C0K0 894 aaPredicted RBP15.35■□□□□ 0.05
SNHG1-206ENST00000537925 BAG6P46379 1132 aa15.34■□□□□ 0.05
SNHG1-206ENST00000537925 PTF1AQ7RTS3 328 aa15.34■□□□□ 0.05
SNHG1-206ENST00000537925 PRKRIP1Q9H875 184 aaPredicted RBP15.34■□□□□ 0.05
SNHG1-206ENST00000537925 MYBBP1AQ9BQG0 1328 aaKnown RBP15.34■□□□□ 0.05
SNHG1-206ENST00000537925 SCN11AQ9UI33 1791 aa15.34■□□□□ 0.05
SNHG1-206ENST00000537925 KCNQ2O43526 872 aa15.33■□□□□ 0.05
SNHG1-206ENST00000537925 HMOX1P09601 288 aa15.33■□□□□ 0.05
SNHG1-206ENST00000537925 NUP188Q5SRE5 1749 aa15.33■□□□□ 0.04
SNHG1-206ENST00000537925 U2SURPO15042 1029 aaKnown RBP15.33■□□□□ 0.04
SNHG1-206ENST00000537925 APBA3O96018 575 aa15.33■□□□□ 0.04
SNHG1-206ENST00000537925 AMOTQ4VCS5 1084 aa15.33■□□□□ 0.04
SNHG1-206ENST00000537925 ACSBG1Q96GR2 724 aa15.33■□□□□ 0.04
SNHG1-206ENST00000537925 PHKG2P15735 406 aa15.32■□□□□ 0.04
SNHG1-206ENST00000537925 NKX1-1Q15270 411 aaPredicted RBP15.32■□□□□ 0.04
SNHG1-206ENST00000537925 PLEKHO1Q53GL0 409 aaPredicted RBP15.32■□□□□ 0.04
SNHG1-206ENST00000537925 NUDCQ9Y266 331 aa15.32■□□□□ 0.04
SNHG1-206ENST00000537925 LY75O60449 1722 aa15.31■□□□□ 0.04
SNHG1-206ENST00000537925 EN1Q05925 392 aaPredicted RBP15.31■□□□□ 0.04
SNHG1-206ENST00000537925 IFNL2Q8IZJ0 200 aa15.31■□□□□ 0.04
SNHG1-206ENST00000537925 CAMKK2Q96RR4 588 aa15.31■□□□□ 0.04
SNHG1-206ENST00000537925 PLSCR1O15162 318 aa15.3■□□□□ 0.04
SNHG1-206ENST00000537925 NEFLP07196 543 aa15.3■□□□□ 0.04
SNHG1-206ENST00000537925 ADAMTS7Q9UKP4 1686 aa15.3■□□□□ 0.04
SNHG1-206ENST00000537925 DLG5Q8TDM6 1919 aa15.29■□□□□ 0.04
SNHG1-206ENST00000537925 PRIM1P49642 420 aaKnown RBP15.28■□□□□ 0.04
SNHG1-206ENST00000537925 EZH2Q15910 746 aaKnown RBP15.28■□□□□ 0.04
SNHG1-206ENST00000537925 ZNF530Q6P9A1 599 aaPredicted RBP15.28■□□□□ 0.04
SNHG1-206ENST00000537925 RSPH6AQ9H0K4 717 aa15.28■□□□□ 0.04
SNHG1-206ENST00000537925 U2AF1L5P0DN76 240 aaPredicted RBP15.27■□□□□ 0.04
SNHG1-206ENST00000537925 U2AF1Q01081 240 aaKnown RBP eCLIP15.27■□□□□ 0.042e-12■■■□□ 16.4
SNHG1-206ENST00000537925 LRP5O75197 1615 aa15.27■□□□□ 0.04
SNHG1-206ENST00000537925 KDM6AO15550 1401 aaPredicted RBP15.26■□□□□ 0.03
SNHG1-206ENST00000537925 FCHSD2O94868 740 aa15.26■□□□□ 0.03
SNHG1-206ENST00000537925 HSP90AB1P08238 724 aaKnown RBP15.26■□□□□ 0.03
SNHG1-206ENST00000537925 MTHFSDQ2M296 383 aaKnown RBP15.26■□□□□ 0.03
SNHG1-206ENST00000537925 SYTL4Q96C24 671 aaPredicted RBP15.26■□□□□ 0.03
SNHG1-206ENST00000537925 TAF1LQ8IZX4 1826 aa15.25■□□□□ 0.03
SNHG1-206ENST00000537925 PRKAR2BP31323 418 aa15.25■□□□□ 0.03
SNHG1-206ENST00000537925 AKAP4Q5JQC9 854 aa15.25■□□□□ 0.03
SNHG1-206ENST00000537925 C1orf141Q5JVX7 400 aa15.25■□□□□ 0.03
SNHG1-206ENST00000537925 DCAF5Q96JK2 942 aa15.25■□□□□ 0.03
SNHG1-206ENST00000537925 SIPA1L3O60292 1781 aaPredicted RBP15.24■□□□□ 0.03
SNHG1-206ENST00000537925 FKBP8Q14318 412 aa15.24■□□□□ 0.03
SNHG1-206ENST00000537925 ERICH6BQ5W0A0 696 aa15.24■□□□□ 0.03
SNHG1-206ENST00000537925 PROM2Q8N271 834 aa15.24■□□□□ 0.03
SNHG1-206ENST00000537925 MPRIPQ6WCQ1 1025 aa15.23■□□□□ 0.03
SNHG1-206ENST00000537925 PHACTR3Q96KR7 559 aa15.23■□□□□ 0.03
SNHG1-206ENST00000537925 PAPPAQ13219 1627 aa15.23■□□□□ 0.03
SNHG1-206ENST00000537925 ERVV-2B6SEH9 535 aa15.22■□□□□ 0.03
SNHG1-206ENST00000537925 IFFO2Q5TF58 517 aa15.22■□□□□ 0.03
SNHG1-206ENST00000537925 HNRNPUQ00839 825 aaKnown RBP eCLIP15.21■□□□□ 0.03
SNHG1-206ENST00000537925 TXNRD1Q16881 649 aa15.21■□□□□ 0.03
SNHG1-206ENST00000537925 GAS2L2Q8NHY3 880 aa15.21■□□□□ 0.03
SNHG1-206ENST00000537925 PIGBQ92521 554 aa15.21■□□□□ 0.03
SNHG1-206ENST00000537925 MRC1P22897 1456 aa15.21■□□□□ 0.03
SNHG1-206ENST00000537925 C5P01031 1676 aa15.21■□□□□ 0.02
SNHG1-206ENST00000537925 ZNF831Q5JPB2 1677 aa15.21■□□□□ 0.02
SNHG1-206ENST00000537925 PLEKHF1Q96S99 279 aa15.2■□□□□ 0.02
SNHG1-206ENST00000537925 TMOD3Q9NYL9 352 aa15.2■□□□□ 0.02
SNHG1-206ENST00000537925 MAP3K5Q99683 1374 aa15.2■□□□□ 0.02
SNHG1-206ENST00000537925 ZBED9Q6R2W3 1325 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms