RNA–Protein interactions for RNA: ENST00000537597.1

SRRM4-202, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-202ENST00000537597 SBF2Q86WG5 1849 aa20.5■□□□□ 0.87
SRRM4-202ENST00000537597 PKD1L3Q7Z443 1732 aa20.49■□□□□ 0.87
SRRM4-202ENST00000537597 DIAPH1O60610 1272 aaKnown RBP20.48■□□□□ 0.87
SRRM4-202ENST00000537597 TATP17735 454 aaPredicted RBP20.48■□□□□ 0.87
SRRM4-202ENST00000537597 NKX1-1Q15270 411 aaPredicted RBP20.48■□□□□ 0.87
SRRM4-202ENST00000537597 AEBP1Q8IUX7 1158 aa20.48■□□□□ 0.87
SRRM4-202ENST00000537597 RAPGEF4Q8WZA2 1011 aa20.48■□□□□ 0.87
SRRM4-202ENST00000537597 CYP27B1O15528 508 aa20.47■□□□□ 0.87
SRRM4-202ENST00000537597 PTF1AQ7RTS3 328 aa20.47■□□□□ 0.87
SRRM4-202ENST00000537597 TNS1Q9HBL0 1735 aaKnown RBP20.47■□□□□ 0.87
SRRM4-202ENST00000537597 CNGB1Q14028 1251 aaPredicted RBP20.45■□□□□ 0.86
SRRM4-202ENST00000537597 PRKRIP1Q9H875 184 aaPredicted RBP20.45■□□□□ 0.86
SRRM4-202ENST00000537597 TRIM37O94972 964 aa20.44■□□□□ 0.86
SRRM4-202ENST00000537597 SULT6B1Q6IMI4 303 aa20.44■□□□□ 0.86
SRRM4-202ENST00000537597 BCL11BQ9C0K0 894 aaPredicted RBP20.44■□□□□ 0.86
SRRM4-202ENST00000537597 CAMKK2Q96RR4 588 aa20.43■□□□□ 0.86
SRRM4-202ENST00000537597 KCNQ2O43526 872 aa20.42■□□□□ 0.86
SRRM4-202ENST00000537597 DDX54Q8TDD1 881 aaKnown RBP20.42■□□□□ 0.86
SRRM4-202ENST00000537597 DEFB132Q7Z7B7 95 aa20.41■□□□□ 0.86
SRRM4-202ENST00000537597 PLSCR1O15162 318 aa20.4■□□□□ 0.86
SRRM4-202ENST00000537597 PCDH11XQ9BZA7 1347 aa20.4■□□□□ 0.86
SRRM4-202ENST00000537597 PCDH11YQ9BZA8 1340 aa20.4■□□□□ 0.86
SRRM4-202ENST00000537597 SPG7Q9UQ90 795 aa20.4■□□□□ 0.86
SRRM4-202ENST00000537597 NHSQ6T4R5 1651 aa20.39■□□□□ 0.86
SRRM4-202ENST00000537597 MYBBP1AQ9BQG0 1328 aaKnown RBP20.39■□□□□ 0.85
SRRM4-202ENST00000537597 PHKG2P15735 406 aa20.39■□□□□ 0.85
SRRM4-202ENST00000537597 AMOTQ4VCS5 1084 aa20.38■□□□□ 0.85
SRRM4-202ENST00000537597 PROM2Q8N271 834 aa20.38■□□□□ 0.85
SRRM4-202ENST00000537597 CFAP53Q96M91 514 aa20.38■□□□□ 0.85
SRRM4-202ENST00000537597 RSPH6AQ9H0K4 717 aa20.37■□□□□ 0.85
SRRM4-202ENST00000537597 HMOX1P09601 288 aa20.36■□□□□ 0.85
SRRM4-202ENST00000537597 PLEKHO1Q53GL0 409 aaPredicted RBP20.36■□□□□ 0.85
SRRM4-202ENST00000537597 IFNL2Q8IZJ0 200 aa20.36■□□□□ 0.85
SRRM4-202ENST00000537597 APBA3O96018 575 aa20.35■□□□□ 0.85
SRRM4-202ENST00000537597 EN1Q05925 392 aaPredicted RBP20.35■□□□□ 0.85
SRRM4-202ENST00000537597 RGPD3A6NKT7 1758 aaPredicted RBP20.34■□□□□ 0.85
SRRM4-202ENST00000537597 RGPD4Q7Z3J3 1758 aa20.34■□□□□ 0.85
SRRM4-202ENST00000537597 TOGARAM1Q9Y4F4 1720 aa20.34■□□□□ 0.85
SRRM4-202ENST00000537597 FCHSD2O94868 740 aa20.34■□□□□ 0.85
SRRM4-202ENST00000537597 BAG6P46379 1132 aa20.34■□□□□ 0.85
SRRM4-202ENST00000537597 PRIM1P49642 420 aaKnown RBP20.34■□□□□ 0.85
SRRM4-202ENST00000537597 ACSBG1Q96GR2 724 aa20.34■□□□□ 0.85
SRRM4-202ENST00000537597 EZH2Q15910 746 aaKnown RBP20.33■□□□□ 0.85
SRRM4-202ENST00000537597 SF3B2Q13435 895 aaKnown RBP20.32■□□□□ 0.84
SRRM4-202ENST00000537597 MTHFSDQ2M296 383 aaKnown RBP20.32■□□□□ 0.84
SRRM4-202ENST00000537597 PHACTR3Q96KR7 559 aa20.32■□□□□ 0.84
SRRM4-202ENST00000537597 PLEKHF1Q96S99 279 aa20.32■□□□□ 0.84
SRRM4-202ENST00000537597 NUDCQ9Y266 331 aa20.32■□□□□ 0.84
SRRM4-202ENST00000537597 ADAMTS7Q9UKP4 1686 aa20.32■□□□□ 0.84
SRRM4-202ENST00000537597 KDM6AO15550 1401 aaPredicted RBP20.31■□□□□ 0.84
SRRM4-202ENST00000537597 DOT1LQ8TEK3 1739 aa20.3■□□□□ 0.84
SRRM4-202ENST00000537597 RREB1Q92766 1687 aa20.3■□□□□ 0.84
SRRM4-202ENST00000537597 U2SURPO15042 1029 aaKnown RBP20.3■□□□□ 0.84
SRRM4-202ENST00000537597 BTAF1O14981 1849 aa20.3■□□□□ 0.84
SRRM4-202ENST00000537597 AKAP4Q5JQC9 854 aa20.29■□□□□ 0.84
SRRM4-202ENST00000537597 ZNF530Q6P9A1 599 aaPredicted RBP20.29■□□□□ 0.84
SRRM4-202ENST00000537597 DCAF5Q96JK2 942 aa20.29■□□□□ 0.84
SRRM4-202ENST00000537597 ITGB4P16144 1822 aa20.28■□□□□ 0.84
SRRM4-202ENST00000537597 ERVV-2B6SEH9 535 aa20.28■□□□□ 0.84
SRRM4-202ENST00000537597 U2AF1L5P0DN76 240 aaPredicted RBP20.28■□□□□ 0.84
SRRM4-202ENST00000537597 U2AF1Q01081 240 aaKnown RBP eCLIP20.28■□□□□ 0.84
SRRM4-202ENST00000537597 PIGBQ92521 554 aa20.28■□□□□ 0.84
SRRM4-202ENST00000537597 HSP90AB1P08238 724 aaKnown RBP20.27■□□□□ 0.84
SRRM4-202ENST00000537597 PRKAR2BP31323 418 aa20.27■□□□□ 0.84
SRRM4-202ENST00000537597 CCDC184Q52MB2 194 aa20.26■□□□□ 0.83
SRRM4-202ENST00000537597 TXNRD1Q16881 649 aa20.25■□□□□ 0.83
SRRM4-202ENST00000537597 LGR6Q9HBX8 967 aa20.25■□□□□ 0.83
SRRM4-202ENST00000537597 LRRC4BQ9NT99 713 aa20.24■□□□□ 0.83
SRRM4-202ENST00000537597 LY75O60449 1722 aa20.24■□□□□ 0.83
SRRM4-202ENST00000537597 NUP188Q5SRE5 1749 aa20.24■□□□□ 0.83
SRRM4-202ENST00000537597 RNMTO43148 476 aaKnown RBP20.23■□□□□ 0.83
SRRM4-202ENST00000537597 MPRIPQ6WCQ1 1025 aa20.23■□□□□ 0.83
SRRM4-202ENST00000537597 IL17REQ8NFR9 667 aa20.23■□□□□ 0.83
SRRM4-202ENST00000537597 SCN11AQ9UI33 1791 aa20.23■□□□□ 0.83
SRRM4-202ENST00000537597 KAT6BQ8WYB5 2073 aa20.22■□□□□ 0.83
SRRM4-202ENST00000537597 GAS2L2Q8NHY3 880 aa20.22■□□□□ 0.83
SRRM4-202ENST00000537597 MRC1P22897 1456 aa20.22■□□□□ 0.83
SRRM4-202ENST00000537597 CEMIPQ8WUJ3 1361 aa20.21■□□□□ 0.83
SRRM4-202ENST00000537597 PAPPAQ13219 1627 aa20.2■□□□□ 0.82
SRRM4-202ENST00000537597 C1orf141Q5JVX7 400 aa20.2■□□□□ 0.82
SRRM4-202ENST00000537597 ATG3Q9NT62 314 aa20.2■□□□□ 0.82
SRRM4-202ENST00000537597 SLC27A3Q5K4L6 730 aa20.19■□□□□ 0.82
SRRM4-202ENST00000537597 SYTL4Q96C24 671 aaPredicted RBP20.19■□□□□ 0.82
SRRM4-202ENST00000537597 ASAP1Q9ULH1 1129 aa20.19■□□□□ 0.82
SRRM4-202ENST00000537597 ADAMTS8Q9UP79 889 aa20.19■□□□□ 0.82
SRRM4-202ENST00000537597 GNAT3A8MTJ3 354 aa20.18■□□□□ 0.82
SRRM4-202ENST00000537597 HTATSF1O43719 755 aaKnown RBP20.18■□□□□ 0.82
SRRM4-202ENST00000537597 NFATC2IPQ8NCF5 419 aa20.18■□□□□ 0.82
SRRM4-202ENST00000537597 PNISRQ8TF01 805 aaKnown RBP20.18■□□□□ 0.82
SRRM4-202ENST00000537597 SLC52A2Q9HAB3 445 aa20.18■□□□□ 0.82
SRRM4-202ENST00000537597 MAP3K5Q99683 1374 aa20.18■□□□□ 0.82
SRRM4-202ENST00000537597 ANP32CO43423 234 aa20.17■□□□□ 0.82
SRRM4-202ENST00000537597 SLC4A9Q96Q91 983 aa20.17■□□□□ 0.82
SRRM4-202ENST00000537597 TMOD3Q9NYL9 352 aa20.17■□□□□ 0.82
SRRM4-202ENST00000537597 SMARCC1Q92922 1105 aaPredicted RBP20.16■□□□□ 0.82
SRRM4-202ENST00000537597 ANO8Q9HCE9 1232 aaPredicted RBP20.16■□□□□ 0.82
SRRM4-202ENST00000537597 AKT1S1Q96B36 256 aa20.15■□□□□ 0.82
SRRM4-202ENST00000537597 PNNQ9H307 717 aaKnown RBP20.15■□□□□ 0.82
SRRM4-202ENST00000537597 PALLDQ8WX93 1383 aa20.15■□□□□ 0.82
SRRM4-202ENST00000537597 ZNF831Q5JPB2 1677 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms