RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 TTC21AQ8NDW8 1320 aa22.11■■□□□ 1.13
LPCAT3-206ENST00000537179 NBPF1Q3BBV0 1214 aa22.11■■□□□ 1.13
LPCAT3-206ENST00000537179 ANKRD36BQ8N2N9 1353 aa22.1■■□□□ 1.13
LPCAT3-206ENST00000537179 RAB3GAP2Q9H2M9 1393 aa22.09■■□□□ 1.13
LPCAT3-206ENST00000537179 SYTL4Q96C24 671 aaPredicted RBP22.08■■□□□ 1.13
LPCAT3-206ENST00000537179 CCNL1Q9UK58 526 aaPredicted RBP22.08■■□□□ 1.13
LPCAT3-206ENST00000537179 TOGARAM1Q9Y4F4 1720 aa22.07■■□□□ 1.12
LPCAT3-206ENST00000537179 PRELPP51888 382 aa22.07■■□□□ 1.12
LPCAT3-206ENST00000537179 DDX54Q8TDD1 881 aaKnown RBP22.07■■□□□ 1.12
LPCAT3-206ENST00000537179 WWC3Q9ULE0 1092 aa22.07■■□□□ 1.12
LPCAT3-206ENST00000537179 IGSF1Q8N6C5 1336 aa22.06■■□□□ 1.12
LPCAT3-206ENST00000537179 TOMM70O94826 608 aa22.06■■□□□ 1.12
LPCAT3-206ENST00000537179 PRIM1P49642 420 aaKnown RBP22.06■■□□□ 1.12
LPCAT3-206ENST00000537179 ANKRD24Q8TF21 1146 aa22.06■■□□□ 1.12
LPCAT3-206ENST00000537179 TNS4Q8IZW8 715 aa22.05■■□□□ 1.12
LPCAT3-206ENST00000537179 ZNF692Q9BU19 519 aaPredicted RBP22.05■■□□□ 1.12
LPCAT3-206ENST00000537179 UBR3Q6ZT12 1888 aa22.03■■□□□ 1.12
LPCAT3-206ENST00000537179 RGPD2P0DJD1 1756 aa22.03■■□□□ 1.12
LPCAT3-206ENST00000537179 JMYQ8N9B5 988 aa22.02■■□□□ 1.12
LPCAT3-206ENST00000537179 KLRG1Q96E93 195 aa22.02■■□□□ 1.12
LPCAT3-206ENST00000537179 KIAA1551Q9HCM1 1747 aa22.02■■□□□ 1.12
LPCAT3-206ENST00000537179 KTN1Q86UP2 1357 aaKnown RBP22.01■■□□□ 1.11
LPCAT3-206ENST00000537179 USP31Q70CQ4 1352 aa22■■□□□ 1.11
LPCAT3-206ENST00000537179 C4BP0C0L5 1744 aa22■■□□□ 1.11
LPCAT3-206ENST00000537179 HTRA3P83110 453 aa22■■□□□ 1.11
LPCAT3-206ENST00000537179 EVC2Q86UK5 1308 aa22■■□□□ 1.11
LPCAT3-206ENST00000537179 USP47Q96K76 1375 aa21.99■■□□□ 1.11
LPCAT3-206ENST00000537179 KIF13BQ9NQT8 1826 aa21.99■■□□□ 1.11
LPCAT3-206ENST00000537179 N4BP2Q86UW6 1770 aaPredicted RBP21.97■■□□□ 1.11
LPCAT3-206ENST00000537179 NMRK2Q9NPI5 230 aa21.96■■□□□ 1.11
LPCAT3-206ENST00000537179 PKD1L3Q7Z443 1732 aa21.95■■□□□ 1.1
LPCAT3-206ENST00000537179 MEGF6O75095 1541 aa21.95■■□□□ 1.1
LPCAT3-206ENST00000537179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.94■■□□□ 1.1
LPCAT3-206ENST00000537179 FLAD1Q8NFF5 587 aa21.94■■□□□ 1.1
LPCAT3-206ENST00000537179 BRCA1P38398 1863 aaKnown RBP21.93■■□□□ 1.1
LPCAT3-206ENST00000537179 NME9Q86XW9 330 aa21.93■■□□□ 1.1
LPCAT3-206ENST00000537179 RBM46Q8TBY0 533 aaKnown RBP21.92■■□□□ 1.1
LPCAT3-206ENST00000537179 AMIGO3Q86WK7 504 aa21.91■■□□□ 1.1
LPCAT3-206ENST00000537179 ITGB4P16144 1822 aa21.91■■□□□ 1.1
LPCAT3-206ENST00000537179 CD163L1Q9NR16 1453 aa21.9■■□□□ 1.1
LPCAT3-206ENST00000537179 SBNO2Q9Y2G9 1366 aa21.9■■□□□ 1.1
LPCAT3-206ENST00000537179 PXDNLA1KZ92 1463 aa21.9■■□□□ 1.1
LPCAT3-206ENST00000537179 LTV1Q96GA3 475 aaPredicted RBP21.89■■□□□ 1.09
LPCAT3-206ENST00000537179 SLC34A2O95436 690 aa21.88■■□□□ 1.09
LPCAT3-206ENST00000537179 ZCRB1Q8TBF4 217 aaKnown RBP21.88■■□□□ 1.09
LPCAT3-206ENST00000537179 TNRC6CQ9HCJ0 1690 aaKnown RBP21.88■■□□□ 1.09
LPCAT3-206ENST00000537179 PALLDQ8WX93 1383 aa21.87■■□□□ 1.09
LPCAT3-206ENST00000537179 ARFGEF1Q9Y6D6 1849 aa21.87■■□□□ 1.09
LPCAT3-206ENST00000537179 MAP2P11137 1827 aaKnown RBP21.86■■□□□ 1.09
LPCAT3-206ENST00000537179 IP6K1Q92551 441 aa21.86■■□□□ 1.09
LPCAT3-206ENST00000537179 PHF14O94880 888 aa21.85■■□□□ 1.09
LPCAT3-206ENST00000537179 FSTL1Q12841 308 aa21.85■■□□□ 1.09
LPCAT3-206ENST00000537179 SMIM5Q71RC9 77 aa21.85■■□□□ 1.09
LPCAT3-206ENST00000537179 AK7Q96M32 723 aa21.85■■□□□ 1.09
LPCAT3-206ENST00000537179 NSD3Q9BZ95 1437 aa21.85■■□□□ 1.09
LPCAT3-206ENST00000537179 C16orf71Q8IYS4 520 aaPredicted RBP21.84■■□□□ 1.09
LPCAT3-206ENST00000537179 KCPQ6ZWJ8 1503 aa21.83■■□□□ 1.09
LPCAT3-206ENST00000537179 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.82■■□□□ 1.08
LPCAT3-206ENST00000537179 PLEKHG2Q9H7P9 1386 aa21.82■■□□□ 1.08
LPCAT3-206ENST00000537179 C10orf71Q711Q0 1435 aa21.81■■□□□ 1.08
LPCAT3-206ENST00000537179 HMGB2P26583 209 aaKnown RBP21.81■■□□□ 1.08
LPCAT3-206ENST00000537179 BCS1LQ9Y276 419 aa21.81■■□□□ 1.08
LPCAT3-206ENST00000537179 EDC4Q6P2E9 1401 aaKnown RBP21.8■■□□□ 1.08
LPCAT3-206ENST00000537179 HSPA1AP0DMV8 641 aaKnown RBP21.8■■□□□ 1.08
LPCAT3-206ENST00000537179 HSPA1BP0DMV9 641 aaKnown RBP21.8■■□□□ 1.08
LPCAT3-206ENST00000537179 ARHGAP27Q6ZUM4 889 aa21.79■■□□□ 1.08
LPCAT3-206ENST00000537179 SBF1O95248 1867 aa21.78■■□□□ 1.08
LPCAT3-206ENST00000537179 SSFA2P28290 1259 aa21.77■■□□□ 1.08
LPCAT3-206ENST00000537179 C4AP0C0L4 1744 aa21.75■■□□□ 1.07
LPCAT3-206ENST00000537179 HOXC9P31274 260 aa21.75■■□□□ 1.07
LPCAT3-206ENST00000537179 C9orf131Q5VYM1 1079 aa21.75■■□□□ 1.07
LPCAT3-206ENST00000537179 MPRIPQ6WCQ1 1025 aa21.75■■□□□ 1.07
LPCAT3-206ENST00000537179 MAP3K19Q56UN5 1328 aa21.75■■□□□ 1.07
LPCAT3-206ENST00000537179 A0A0G2JLW4 131 aa21.74■■□□□ 1.07
LPCAT3-206ENST00000537179 MMP10P09238 476 aa21.74■■□□□ 1.07
LPCAT3-206ENST00000537179 TGFB2P61812 414 aa21.74■■□□□ 1.07
LPCAT3-206ENST00000537179 CGNL1Q0VF96 1302 aa21.74■■□□□ 1.07
LPCAT3-206ENST00000537179 KDM2BQ8NHM5 1336 aa21.73■■□□□ 1.07
LPCAT3-206ENST00000537179 A0A1W2PP64 1363 aa21.73■■□□□ 1.07
LPCAT3-206ENST00000537179 HDGFL2Q7Z4V5 671 aaPredicted RBP21.72■■□□□ 1.07
LPCAT3-206ENST00000537179 USHBP1Q8N6Y0 703 aa21.72■■□□□ 1.07
LPCAT3-206ENST00000537179 LINC00116Q8NCU8 138 aa21.72■■□□□ 1.07
LPCAT3-206ENST00000537179 PCDH11XQ9BZA7 1347 aa21.72■■□□□ 1.07
LPCAT3-206ENST00000537179 PCDH11YQ9BZA8 1340 aa21.72■■□□□ 1.07
LPCAT3-206ENST00000537179 FCHSD2O94868 740 aa21.71■■□□□ 1.07
LPCAT3-206ENST00000537179 SMC1BQ8NDV3 1235 aa21.71■■□□□ 1.07
LPCAT3-206ENST00000537179 SMARCC1Q92922 1105 aaPredicted RBP21.71■■□□□ 1.07
LPCAT3-206ENST00000537179 NBPF6Q5VWK0 638 aa21.7■■□□□ 1.06
LPCAT3-206ENST00000537179 NBPF4Q96M43 638 aa21.7■■□□□ 1.06
LPCAT3-206ENST00000537179 RRAGCQ9HB90 399 aa21.7■■□□□ 1.06
LPCAT3-206ENST00000537179 ROCK2O75116 1388 aaKnown RBP21.7■■□□□ 1.06
LPCAT3-206ENST00000537179 DPEP1P16444 411 aa21.69■■□□□ 1.06
LPCAT3-206ENST00000537179 TMC1Q8TDI8 760 aa21.69■■□□□ 1.06
LPCAT3-206ENST00000537179 GNPATO15228 680 aa21.68■■□□□ 1.06
LPCAT3-206ENST00000537179 AMPHP49418 695 aa21.68■■□□□ 1.06
LPCAT3-206ENST00000537179 RAPGEF4Q8WZA2 1011 aa21.68■■□□□ 1.06
LPCAT3-206ENST00000537179 RTL1A6NKG5 1358 aa21.68■■□□□ 1.06
LPCAT3-206ENST00000537179 FBLN1P23142 703 aa21.67■■□□□ 1.06
LPCAT3-206ENST00000537179 SLC12A5Q9H2X9 1139 aa21.67■■□□□ 1.06
LPCAT3-206ENST00000537179 RNF181Q9P0P0 153 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms