RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 USHBP1Q8N6Y0 703 aa23.56■■□□□ 1.36
SFSWAP-205ENST00000537164 RAPGEF4Q8WZA2 1011 aa23.55■■□□□ 1.36
SFSWAP-205ENST00000537164 PKD1L3Q7Z443 1732 aa23.55■■□□□ 1.36
SFSWAP-205ENST00000537164 BTAF1O14981 1849 aa23.54■■□□□ 1.36
SFSWAP-205ENST00000537164 KCNQ2O43526 872 aa23.54■■□□□ 1.36
SFSWAP-205ENST00000537164 TNNT2P45379 298 aaPredicted RBP23.54■■□□□ 1.36
SFSWAP-205ENST00000537164 MORC1Q86VD1 984 aa23.54■■□□□ 1.36
SFSWAP-205ENST00000537164 DDX54Q8TDD1 881 aaKnown RBP23.53■■□□□ 1.36
SFSWAP-205ENST00000537164 KAT6BQ8WYB5 2073 aa23.53■■□□□ 1.36
SFSWAP-205ENST00000537164 TATP17735 454 aaPredicted RBP23.52■■□□□ 1.36
SFSWAP-205ENST00000537164 DOT1LQ8TEK3 1739 aa23.51■■□□□ 1.35
SFSWAP-205ENST00000537164 PROM2Q8N271 834 aa23.51■■□□□ 1.35
SFSWAP-205ENST00000537164 EYA1Q99502 592 aa23.51■■□□□ 1.35
SFSWAP-205ENST00000537164 PLEKHG2Q9H7P9 1386 aa23.51■■□□□ 1.35
SFSWAP-205ENST00000537164 NPC1L1Q9UHC9 1359 aa23.51■■□□□ 1.35
SFSWAP-205ENST00000537164 EIF4A2Q14240 407 aaKnown RBP23.5■■□□□ 1.35
SFSWAP-205ENST00000537164 ACSBG1Q96GR2 724 aa23.5■■□□□ 1.35
SFSWAP-205ENST00000537164 LRP5O75197 1615 aa23.5■■□□□ 1.35
SFSWAP-205ENST00000537164 PSDA5PKW4 1024 aaPredicted RBP23.49■■□□□ 1.35
SFSWAP-205ENST00000537164 R3HDM1Q15032 1099 aaKnown RBP23.48■■□□□ 1.35
SFSWAP-205ENST00000537164 NBPF14Q5TI25 921 aa23.47■■□□□ 1.35
SFSWAP-205ENST00000537164 PCDH11XQ9BZA7 1347 aa23.47■■□□□ 1.35
SFSWAP-205ENST00000537164 PCDH11YQ9BZA8 1340 aa23.47■■□□□ 1.35
SFSWAP-205ENST00000537164 TXNRD1Q16881 649 aa23.46■■□□□ 1.35
SFSWAP-205ENST00000537164 IGSF1Q8N6C5 1336 aa23.46■■□□□ 1.35
SFSWAP-205ENST00000537164 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.46■■□□□ 1.353e-9■■■■□ 20.5
SFSWAP-205ENST00000537164 CYP27B1O15528 508 aa23.43■■□□□ 1.34
SFSWAP-205ENST00000537164 LY75O60449 1722 aa23.42■■□□□ 1.34
SFSWAP-205ENST00000537164 PAPPAQ13219 1627 aa23.42■■□□□ 1.34
SFSWAP-205ENST00000537164 PRIM1P49642 420 aaKnown RBP23.42■■□□□ 1.34
SFSWAP-205ENST00000537164 SPG7Q9UQ90 795 aa23.41■■□□□ 1.34
SFSWAP-205ENST00000537164 TOGARAM1Q9Y4F4 1720 aa23.41■■□□□ 1.34
SFSWAP-205ENST00000537164 NKX1-1Q15270 411 aaPredicted RBP23.4■■□□□ 1.34
SFSWAP-205ENST00000537164 ANO8Q9HCE9 1232 aaPredicted RBP23.4■■□□□ 1.34
SFSWAP-205ENST00000537164 ITGB4P16144 1822 aa23.4■■□□□ 1.34
SFSWAP-205ENST00000537164 CC2D1BQ5T0F9 858 aaKnown RBP23.39■■□□□ 1.33
SFSWAP-205ENST00000537164 IL13P35225 146 aa23.38■■□□□ 1.33
SFSWAP-205ENST00000537164 KDRP35968 1356 aa23.38■■□□□ 1.33
SFSWAP-205ENST00000537164 CASZ1Q86V15 1759 aa23.37■■□□□ 1.33
SFSWAP-205ENST00000537164 MTHFSP49914 203 aa23.37■■□□□ 1.33
SFSWAP-205ENST00000537164 SYTL4Q96C24 671 aaPredicted RBP23.37■■□□□ 1.33
SFSWAP-205ENST00000537164 SLC27A3Q5K4L6 730 aa23.35■■□□□ 1.33
SFSWAP-205ENST00000537164 SLC15A2Q16348 729 aa23.34■■□□□ 1.33
SFSWAP-205ENST00000537164 LRRC4BQ9NT99 713 aa23.34■■□□□ 1.33
SFSWAP-205ENST00000537164 PHKG2P15735 406 aa23.33■■□□□ 1.33
SFSWAP-205ENST00000537164 IFNL2Q8IZJ0 200 aa23.33■■□□□ 1.33
SFSWAP-205ENST00000537164 STK32BQ9NY57 414 aa23.32■■□□□ 1.32
SFSWAP-205ENST00000537164 QSER1Q2KHR3 1735 aa23.32■■□□□ 1.32
SFSWAP-205ENST00000537164 COL3A1P02461 1466 aaPredicted RBP23.3■■□□□ 1.32
SFSWAP-205ENST00000537164 AMOTQ4VCS5 1084 aa23.3■■□□□ 1.32
SFSWAP-205ENST00000537164 AEBP1Q8IUX7 1158 aa23.3■■□□□ 1.32
SFSWAP-205ENST00000537164 PLEKHO1Q53GL0 409 aaPredicted RBP23.29■■□□□ 1.32
SFSWAP-205ENST00000537164 SULT6B1Q6IMI4 303 aa23.29■■□□□ 1.32
SFSWAP-205ENST00000537164 MPRIPQ6WCQ1 1025 aa23.27■■□□□ 1.32
SFSWAP-205ENST00000537164 TAF1LQ8IZX4 1826 aa23.26■■□□□ 1.31
SFSWAP-205ENST00000537164 DIAPH1O60610 1272 aaKnown RBP23.26■■□□□ 1.31
SFSWAP-205ENST00000537164 AKT1S1Q96B36 256 aa23.26■■□□□ 1.31
SFSWAP-205ENST00000537164 HSP90AB1P08238 724 aaKnown RBP23.25■■□□□ 1.31
SFSWAP-205ENST00000537164 ZNF827Q17R98 1081 aa23.25■■□□□ 1.31
SFSWAP-205ENST00000537164 PIGBQ92521 554 aa23.25■■□□□ 1.31
SFSWAP-205ENST00000537164 PDGFDQ9GZP0 370 aaPredicted RBP23.25■■□□□ 1.31
SFSWAP-205ENST00000537164 C5P01031 1676 aa23.25■■□□□ 1.31
SFSWAP-205ENST00000537164 TUBGCP6Q96RT7 1819 aa23.24■■□□□ 1.31
SFSWAP-205ENST00000537164 SMARCC1Q92922 1105 aaPredicted RBP23.24■■□□□ 1.31
SFSWAP-205ENST00000537164 DCAF5Q96JK2 942 aa23.24■■□□□ 1.31
SFSWAP-205ENST00000537164 SPON1Q9HCB6 807 aa23.24■■□□□ 1.31
SFSWAP-205ENST00000537164 PALLDQ8WX93 1383 aa23.24■■□□□ 1.31
SFSWAP-205ENST00000537164 ERVV-2B6SEH9 535 aa23.23■■□□□ 1.31
SFSWAP-205ENST00000537164 CCNL1Q9UK58 526 aaPredicted RBP23.23■■□□□ 1.31
SFSWAP-205ENST00000537164 HMGB2P26583 209 aaKnown RBP23.22■■□□□ 1.31
SFSWAP-205ENST00000537164 ZNF530Q6P9A1 599 aaPredicted RBP23.22■■□□□ 1.31
SFSWAP-205ENST00000537164 TMOD3Q9NYL9 352 aa23.22■■□□□ 1.31
SFSWAP-205ENST00000537164 KDM6AO15550 1401 aaPredicted RBP23.22■■□□□ 1.31
SFSWAP-205ENST00000537164 KCNQ4P56696 695 aa23.21■■□□□ 1.31
SFSWAP-205ENST00000537164 SCN11AQ9UI33 1791 aa23.21■■□□□ 1.31
SFSWAP-205ENST00000537164 CNGB1Q14028 1251 aaPredicted RBP23.2■■□□□ 1.3
SFSWAP-205ENST00000537164 ZNF831Q5JPB2 1677 aa23.19■■□□□ 1.3
SFSWAP-205ENST00000537164 PPP2R1AP30153 589 aa23.19■■□□□ 1.3
SFSWAP-205ENST00000537164 COL24A1Q17RW2 1714 aa23.19■■□□□ 1.3
SFSWAP-205ENST00000537164 VIRMAQ69YN4 1812 aaKnown RBP23.18■■□□□ 1.3
SFSWAP-205ENST00000537164 HMOX1P09601 288 aa23.18■■□□□ 1.3
SFSWAP-205ENST00000537164 C1orf141Q5JVX7 400 aa23.18■■□□□ 1.3
SFSWAP-205ENST00000537164 ADAMTS7Q9UKP4 1686 aa23.17■■□□□ 1.3
SFSWAP-205ENST00000537164 MTFR1LQ9H019 292 aa23.17■■□□□ 1.3
SFSWAP-205ENST00000537164 PNPLA7Q6ZV29 1317 aa23.16■■□□□ 1.3
SFSWAP-205ENST00000537164 AKAP4Q5JQC9 854 aa23.16■■□□□ 1.3
SFSWAP-205ENST00000537164 ASAP1Q9ULH1 1129 aa23.16■■□□□ 1.3
SFSWAP-205ENST00000537164 C4BP0C0L5 1744 aa23.16■■□□□ 1.3
SFSWAP-205ENST00000537164 ZBTB7AO95365 584 aa23.15■■□□□ 1.3
SFSWAP-205ENST00000537164 PTGER2P43116 358 aa23.15■■□□□ 1.3
SFSWAP-205ENST00000537164 SLC16A10Q8TF71 515 aa23.15■■□□□ 1.3
SFSWAP-205ENST00000537164 CFAP53Q96M91 514 aa23.15■■□□□ 1.3
SFSWAP-205ENST00000537164 ATG3Q9NT62 314 aa23.15■■□□□ 1.3
SFSWAP-205ENST00000537164 SGIP1Q9BQI5 828 aa23.14■■□□□ 1.29
SFSWAP-205ENST00000537164 TFCP2L1Q9NZI6 479 aa23.14■■□□□ 1.29
SFSWAP-205ENST00000537164 LOC102724428A0A0B4J2F2 783 aa23.13■■□□□ 1.29
SFSWAP-205ENST00000537164 SIK1P57059 783 aa23.13■■□□□ 1.29
SFSWAP-205ENST00000537164 UBR3Q6ZT12 1888 aa23.12■■□□□ 1.29
SFSWAP-205ENST00000537164 MRC1P22897 1456 aa23.11■■□□□ 1.29
SFSWAP-205ENST00000537164 U2SURPO15042 1029 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms