RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 DIAPH1O60610 1272 aaKnown RBP28.3■■■□□ 2.12
LPCAT3-204ENST00000536797 TRIM37O94972 964 aa28.3■■■□□ 2.12
LPCAT3-204ENST00000536797 DDX54Q8TDD1 881 aaKnown RBP28.3■■■□□ 2.12
LPCAT3-204ENST00000536797 TNS1Q9HBL0 1735 aaKnown RBP28.29■■■□□ 2.12
LPCAT3-204ENST00000536797 CFAP53Q96M91 514 aa28.28■■■□□ 2.12
LPCAT3-204ENST00000536797 PKD1L3Q7Z443 1732 aa28.28■■■□□ 2.12
LPCAT3-204ENST00000536797 COL3A1P02461 1466 aaPredicted RBP28.28■■■□□ 2.12
LPCAT3-204ENST00000536797 RALBP1Q15311 655 aa28.26■■■□□ 2.11
LPCAT3-204ENST00000536797 PCDH11XQ9BZA7 1347 aa28.25■■■□□ 2.11
LPCAT3-204ENST00000536797 PCDH11YQ9BZA8 1340 aa28.25■■■□□ 2.11
LPCAT3-204ENST00000536797 BAG6P46379 1132 aa28.25■■■□□ 2.11
LPCAT3-204ENST00000536797 PLEKHG2Q9H7P9 1386 aa28.24■■■□□ 2.11
LPCAT3-204ENST00000536797 SULT6B1Q6IMI4 303 aa28.24■■■□□ 2.11
LPCAT3-204ENST00000536797 SPG7Q9UQ90 795 aa28.24■■■□□ 2.11
LPCAT3-204ENST00000536797 DEFB132Q7Z7B7 95 aa28.22■■■□□ 2.11
LPCAT3-204ENST00000536797 AEBP1Q8IUX7 1158 aa28.22■■■□□ 2.11
LPCAT3-204ENST00000536797 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.22■■■□□ 2.11
LPCAT3-204ENST00000536797 KDRP35968 1356 aa28.22■■■□□ 2.11
LPCAT3-204ENST00000536797 NHSQ6T4R5 1651 aa28.2■■■□□ 2.11
LPCAT3-204ENST00000536797 APBA3O96018 575 aa28.2■■■□□ 2.11
LPCAT3-204ENST00000536797 BCL11BQ9C0K0 894 aaPredicted RBP28.2■■■□□ 2.11
LPCAT3-204ENST00000536797 ACSBG1Q96GR2 724 aa28.19■■■□□ 2.1
LPCAT3-204ENST00000536797 KAT6BQ8WYB5 2073 aa28.19■■■□□ 2.1
LPCAT3-204ENST00000536797 U2SURPO15042 1029 aaKnown RBP28.18■■■□□ 2.1
LPCAT3-204ENST00000536797 CYP27B1O15528 508 aa28.17■■■□□ 2.1
LPCAT3-204ENST00000536797 HMOX1P09601 288 aa28.17■■■□□ 2.1
LPCAT3-204ENST00000536797 NUDCQ9Y266 331 aa28.17■■■□□ 2.1
LPCAT3-204ENST00000536797 DOT1LQ8TEK3 1739 aa28.17■■■□□ 2.1
LPCAT3-204ENST00000536797 EN1Q05925 392 aaPredicted RBP28.16■■■□□ 2.1
LPCAT3-204ENST00000536797 PLEKHO1Q53GL0 409 aaPredicted RBP28.16■■■□□ 2.1
LPCAT3-204ENST00000536797 KCNQ2O43526 872 aa28.15■■■□□ 2.1
LPCAT3-204ENST00000536797 AMOTQ4VCS5 1084 aa28.15■■■□□ 2.1
LPCAT3-204ENST00000536797 PTF1AQ7RTS3 328 aa28.14■■■□□ 2.1
LPCAT3-204ENST00000536797 MYBBP1AQ9BQG0 1328 aaKnown RBP28.14■■■□□ 2.09
LPCAT3-204ENST00000536797 IFNL2Q8IZJ0 200 aa28.13■■■□□ 2.09
LPCAT3-204ENST00000536797 PRKRIP1Q9H875 184 aaPredicted RBP28.11■■■□□ 2.09
LPCAT3-204ENST00000536797 RGPD3A6NKT7 1758 aaPredicted RBP28.11■■■□□ 2.09
LPCAT3-204ENST00000536797 RGPD4Q7Z3J3 1758 aa28.11■■■□□ 2.09
LPCAT3-204ENST00000536797 BTAF1O14981 1849 aa28.1■■■□□ 2.09
LPCAT3-204ENST00000536797 PHKG2P15735 406 aa28.1■■■□□ 2.09
LPCAT3-204ENST00000536797 SYTL4Q96C24 671 aaPredicted RBP28.1■■■□□ 2.09
LPCAT3-204ENST00000536797 EZH2Q15910 746 aaKnown RBP28.09■■■□□ 2.09
LPCAT3-204ENST00000536797 CAMKK2Q96RR4 588 aa28.09■■■□□ 2.09
LPCAT3-204ENST00000536797 PLSCR1O15162 318 aa28.09■■■□□ 2.09
LPCAT3-204ENST00000536797 PRIM1P49642 420 aaKnown RBP28.09■■■□□ 2.09
LPCAT3-204ENST00000536797 NKX1-1Q15270 411 aaPredicted RBP28.09■■■□□ 2.09
LPCAT3-204ENST00000536797 ZNF530Q6P9A1 599 aaPredicted RBP28.09■■■□□ 2.09
LPCAT3-204ENST00000536797 U2AF1L5P0DN76 240 aaPredicted RBP28.07■■■□□ 2.08
LPCAT3-204ENST00000536797 U2AF1Q01081 240 aaKnown RBP eCLIP28.07■■■□□ 2.08
LPCAT3-204ENST00000536797 TOGARAM1Q9Y4F4 1720 aa28.07■■■□□ 2.08
LPCAT3-204ENST00000536797 C1orf141Q5JVX7 400 aa28.06■■■□□ 2.08
LPCAT3-204ENST00000536797 RREB1Q92766 1687 aa28.05■■■□□ 2.08
LPCAT3-204ENST00000536797 HSP90AB1P08238 724 aaKnown RBP28.05■■■□□ 2.08
LPCAT3-204ENST00000536797 ITGB4P16144 1822 aa28.04■■■□□ 2.08
LPCAT3-204ENST00000536797 RSPH6AQ9H0K4 717 aa28.02■■■□□ 2.08
LPCAT3-204ENST00000536797 PRKAR2BP31323 418 aa28.01■■■□□ 2.07
LPCAT3-204ENST00000536797 DCAF5Q96JK2 942 aa28.01■■■□□ 2.07
LPCAT3-204ENST00000536797 FCHSD2O94868 740 aa28■■■□□ 2.07
LPCAT3-204ENST00000536797 MTHFSDQ2M296 383 aaKnown RBP28■■■□□ 2.07
LPCAT3-204ENST00000536797 AKAP4Q5JQC9 854 aa28■■■□□ 2.07
LPCAT3-204ENST00000536797 MPRIPQ6WCQ1 1025 aa28■■■□□ 2.07
LPCAT3-204ENST00000536797 NUP188Q5SRE5 1749 aa27.99■■■□□ 2.07
LPCAT3-204ENST00000536797 ANP32CO43423 234 aa27.97■■■□□ 2.07
LPCAT3-204ENST00000536797 KDM6AO15550 1401 aaPredicted RBP27.96■■■□□ 2.07
LPCAT3-204ENST00000536797 TXNRD1Q16881 649 aa27.96■■■□□ 2.07
LPCAT3-204ENST00000536797 GAS2L2Q8NHY3 880 aa27.96■■■□□ 2.07
LPCAT3-204ENST00000536797 TMOD3Q9NYL9 352 aa27.96■■■□□ 2.07
LPCAT3-204ENST00000536797 ERVV-2B6SEH9 535 aa27.95■■■□□ 2.07
LPCAT3-204ENST00000536797 SCN11AQ9UI33 1791 aa27.94■■■□□ 2.06
LPCAT3-204ENST00000536797 PROM2Q8N271 834 aa27.94■■■□□ 2.06
LPCAT3-204ENST00000536797 PIGBQ92521 554 aa27.93■■■□□ 2.06
LPCAT3-204ENST00000536797 PHACTR3Q96KR7 559 aa27.92■■■□□ 2.06
LPCAT3-204ENST00000536797 VIRMAQ69YN4 1812 aaKnown RBP27.92■■■□□ 2.06
LPCAT3-204ENST00000536797 LY75O60449 1722 aa27.92■■■□□ 2.06
LPCAT3-204ENST00000536797 NEFMP07197 916 aa27.92■■■□□ 2.06
LPCAT3-204ENST00000536797 PNNQ9H307 717 aaKnown RBP27.92■■■□□ 2.06
LPCAT3-204ENST00000536797 NBPF14Q5TI25 921 aa27.91■■■□□ 2.06
LPCAT3-204ENST00000536797 CABP4P57796 275 aa27.9■■■□□ 2.06
LPCAT3-204ENST00000536797 MAP3K5Q99683 1374 aa27.89■■■□□ 2.06
LPCAT3-204ENST00000536797 WDR43Q15061 677 aaKnown RBP eCLIP27.89■■■□□ 2.06
LPCAT3-204ENST00000536797 SLC27A3Q5K4L6 730 aa27.89■■■□□ 2.06
LPCAT3-204ENST00000536797 SMARCC1Q92922 1105 aaPredicted RBP27.89■■■□□ 2.06
LPCAT3-204ENST00000536797 PALLDQ8WX93 1383 aa27.89■■■□□ 2.05
LPCAT3-204ENST00000536797 GNAT3A8MTJ3 354 aa27.88■■■□□ 2.05
LPCAT3-204ENST00000536797 ADAMTS7Q9UKP4 1686 aa27.88■■■□□ 2.05
LPCAT3-204ENST00000536797 RNMTO43148 476 aaKnown RBP27.87■■■□□ 2.05
LPCAT3-204ENST00000536797 LGR6Q9HBX8 967 aa27.87■■■□□ 2.05
LPCAT3-204ENST00000536797 PLEKHF1Q96S99 279 aa27.85■■■□□ 2.05
LPCAT3-204ENST00000536797 CCNL1Q9UK58 526 aaPredicted RBP27.84■■■□□ 2.05
LPCAT3-204ENST00000536797 MAPK8IP3Q9UPT6 1336 aa27.84■■■□□ 2.05
LPCAT3-204ENST00000536797 MRC1P22897 1456 aa27.84■■■□□ 2.05
LPCAT3-204ENST00000536797 NFATC2IPQ8NCF5 419 aa27.84■■■□□ 2.05
LPCAT3-204ENST00000536797 SLC52A2Q9HAB3 445 aa27.84■■■□□ 2.05
LPCAT3-204ENST00000536797 LRRC4BQ9NT99 713 aa27.84■■■□□ 2.05
LPCAT3-204ENST00000536797 ASAP1Q9ULH1 1129 aa27.84■■■□□ 2.05
LPCAT3-204ENST00000536797 R3HDM1Q15032 1099 aaKnown RBP27.83■■■□□ 2.05
LPCAT3-204ENST00000536797 PAPPAQ13219 1627 aa27.82■■■□□ 2.04
LPCAT3-204ENST00000536797 PSDA5PKW4 1024 aaPredicted RBP27.82■■■□□ 2.04
LPCAT3-204ENST00000536797 ATG3Q9NT62 314 aa27.82■■■□□ 2.04
LPCAT3-204ENST00000536797 ANO8Q9HCE9 1232 aaPredicted RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms