RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 HSPA1LP34931 641 aa16.78■□□□□ 0.28
CDK5RAP3-202ENST00000536708 PARP4Q9UKK3 1724 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-202ENST00000536708 LRRC37A3O60309 1634 aa16.78■□□□□ 0.28
CDK5RAP3-202ENST00000536708 MTHFSDQ2M296 383 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-202ENST00000536708 STRN4Q9NRL3 753 aa16.78■□□□□ 0.28
CDK5RAP3-202ENST00000536708 WNK3Q9BYP7 1800 aa16.78■□□□□ 0.28
CDK5RAP3-202ENST00000536708 PKD1L3Q7Z443 1732 aa16.77■□□□□ 0.28
CDK5RAP3-202ENST00000536708 GOLGA2Q08379 1002 aa16.77■□□□□ 0.28
CDK5RAP3-202ENST00000536708 JCADQ9P266 1359 aa16.77■□□□□ 0.27
CDK5RAP3-202ENST00000536708 WDR17Q8IZU2 1322 aa16.77■□□□□ 0.27
CDK5RAP3-202ENST00000536708 DUSP27Q5VZP5 1158 aa16.77■□□□□ 0.27
CDK5RAP3-202ENST00000536708 NGEFQ8N5V2 710 aa16.77■□□□□ 0.27
CDK5RAP3-202ENST00000536708 BTG4Q9NY30 223 aa16.77■□□□□ 0.27
CDK5RAP3-202ENST00000536708 SHANK3Q9BYB0 1731 aa16.76■□□□□ 0.27
CDK5RAP3-202ENST00000536708 TCERG1O14776 1098 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-202ENST00000536708 DCTN1Q14203 1278 aa16.76■□□□□ 0.27
CDK5RAP3-202ENST00000536708 CCDC27Q2M243 656 aa16.76■□□□□ 0.27
CDK5RAP3-202ENST00000536708 NWD2Q9ULI1 1742 aa16.76■□□□□ 0.27
CDK5RAP3-202ENST00000536708 LARP1Q6PKG0 1096 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-202ENST00000536708 TRMT2AQ8IZ69 625 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-202ENST00000536708 SLFN5Q08AF3 891 aa16.74■□□□□ 0.27
CDK5RAP3-202ENST00000536708 TOM1L2Q6ZVM7 507 aa16.73■□□□□ 0.27
CDK5RAP3-202ENST00000536708 MS4A1P11836 297 aa16.73■□□□□ 0.27
CDK5RAP3-202ENST00000536708 MCM10Q7L590 875 aa16.73■□□□□ 0.27
CDK5RAP3-202ENST00000536708 TSR2Q969E8 191 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-202ENST00000536708 USP35Q9P2H5 1018 aa16.71■□□□□ 0.27
CDK5RAP3-202ENST00000536708 CRB1P82279 1406 aa16.71■□□□□ 0.27
CDK5RAP3-202ENST00000536708 MAP3K5Q99683 1374 aa16.71■□□□□ 0.27
CDK5RAP3-202ENST00000536708 NOP58Q9Y2X3 529 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-202ENST00000536708 E9PSI1 815 aa16.7■□□□□ 0.26
CDK5RAP3-202ENST00000536708 WDR63Q8IWG1 891 aa16.7■□□□□ 0.26
CDK5RAP3-202ENST00000536708 SLIT2O94813 1529 aa16.7■□□□□ 0.26
CDK5RAP3-202ENST00000536708 PLIN1O60240 522 aa16.69■□□□□ 0.26
CDK5RAP3-202ENST00000536708 EVA1CP58658 441 aa16.69■□□□□ 0.26
CDK5RAP3-202ENST00000536708 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP3-202ENST00000536708 GAS2L2Q8NHY3 880 aa16.69■□□□□ 0.26
CDK5RAP3-202ENST00000536708 CRBNQ96SW2 442 aa16.69■□□□□ 0.26
CDK5RAP3-202ENST00000536708 SCN11AQ9UI33 1791 aa16.69■□□□□ 0.26
CDK5RAP3-202ENST00000536708 OVOS2A0A0G2JMS6 1433 aa16.69■□□□□ 0.26
CDK5RAP3-202ENST00000536708 RAPGEF4Q8WZA2 1011 aa16.69■□□□□ 0.26
CDK5RAP3-202ENST00000536708 ADAMTS7Q9UKP4 1686 aa16.68■□□□□ 0.26
CDK5RAP3-202ENST00000536708 ZNF530Q6P9A1 599 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP3-202ENST00000536708 SIPA1L3O60292 1781 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP3-202ENST00000536708 DEKP35659 375 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-202ENST00000536708 C8orf37Q96NL8 207 aa16.68■□□□□ 0.26
CDK5RAP3-202ENST00000536708 LAS1LQ9Y4W2 734 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-202ENST00000536708 LMOD3Q0VAK6 560 aa16.67■□□□□ 0.26
CDK5RAP3-202ENST00000536708 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.67■□□□□ 0.26
CDK5RAP3-202ENST00000536708 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP3-202ENST00000536708 ANP32AP39687 249 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP3-202ENST00000536708 CARD10Q9BWT7 1032 aa16.66■□□□□ 0.26
CDK5RAP3-202ENST00000536708 SPATA31A6Q5VVP1 1343 aa16.66■□□□□ 0.26
CDK5RAP3-202ENST00000536708 GNAT3A8MTJ3 354 aa16.66■□□□□ 0.26
CDK5RAP3-202ENST00000536708 TATP17735 454 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP3-202ENST00000536708 IPO9Q96P70 1041 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP3-202ENST00000536708 PLEKHO1Q53GL0 409 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-202ENST00000536708 IL16Q14005 1332 aa16.65■□□□□ 0.26
CDK5RAP3-202ENST00000536708 BCL9LQ86UU0 1499 aa16.65■□□□□ 0.26
CDK5RAP3-202ENST00000536708 TOGARAM1Q9Y4F4 1720 aa16.64■□□□□ 0.25
CDK5RAP3-202ENST00000536708 KDM3BQ7LBC6 1761 aa16.64■□□□□ 0.25
CDK5RAP3-202ENST00000536708 KDM6AO15550 1401 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-202ENST00000536708 IL17REQ8NFR9 667 aa16.64■□□□□ 0.25
CDK5RAP3-202ENST00000536708 RTF1Q92541 710 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP3-202ENST00000536708 KDM2BQ8NHM5 1336 aa16.64■□□□□ 0.25
CDK5RAP3-202ENST00000536708 DISP2A7MBM2 1401 aa16.64■□□□□ 0.25
CDK5RAP3-202ENST00000536708 MPRIPQ6WCQ1 1025 aa16.63■□□□□ 0.25
CDK5RAP3-202ENST00000536708 BACH2Q9BYV9 841 aa16.63■□□□□ 0.25
CDK5RAP3-202ENST00000536708 MYH16Q9H6N6 1097 aa16.63■□□□□ 0.25
CDK5RAP3-202ENST00000536708 MBIPQ9NS73 344 aa16.63■□□□□ 0.25
CDK5RAP3-202ENST00000536708 PDE4AP27815 886 aa16.62■□□□□ 0.25
CDK5RAP3-202ENST00000536708 AMOTQ4VCS5 1084 aa16.62■□□□□ 0.25
CDK5RAP3-202ENST00000536708 C20orf194Q5TEA3 1177 aa16.62■□□□□ 0.25
CDK5RAP3-202ENST00000536708 LGR6Q9HBX8 967 aa16.62■□□□□ 0.25
CDK5RAP3-202ENST00000536708 CEMIPQ8WUJ3 1361 aa16.62■□□□□ 0.25
CDK5RAP3-202ENST00000536708 CYP27B1O15528 508 aa16.62■□□□□ 0.25
CDK5RAP3-202ENST00000536708 ZNF853P0CG23 659 aa16.62■□□□□ 0.25
CDK5RAP3-202ENST00000536708 IL2RBP14784 551 aa16.62■□□□□ 0.25
CDK5RAP3-202ENST00000536708 NGLY1Q96IV0 654 aa16.62■□□□□ 0.25
CDK5RAP3-202ENST00000536708 MIS18AQ9NYP9 233 aa16.62■□□□□ 0.25
CDK5RAP3-202ENST00000536708 EXOSC9Q06265 439 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-202ENST00000536708 AKAP4Q5JQC9 854 aa16.61■□□□□ 0.25
CDK5RAP3-202ENST00000536708 C1orf141Q5JVX7 400 aa16.61■□□□□ 0.25
CDK5RAP3-202ENST00000536708 IFT57Q9NWB7 429 aa16.61■□□□□ 0.25
CDK5RAP3-202ENST00000536708 CFAP44Q96MT7 982 aa16.6■□□□□ 0.25
CDK5RAP3-202ENST00000536708 PHKG2P15735 406 aa16.6■□□□□ 0.25
CDK5RAP3-202ENST00000536708 CENPQQ7L2Z9 268 aaPredicted RBP16.6■□□□□ 0.25
CDK5RAP3-202ENST00000536708 SPATA31A1Q5TZJ5 1347 aa16.59■□□□□ 0.25
CDK5RAP3-202ENST00000536708 GNAI1P63096 354 aa16.59■□□□□ 0.25
CDK5RAP3-202ENST00000536708 CALD1Q05682 793 aaKnown RBP16.59■□□□□ 0.25
CDK5RAP3-202ENST00000536708 KRT24Q2M2I5 525 aa16.59■□□□□ 0.25
CDK5RAP3-202ENST00000536708 SPG7Q9UQ90 795 aa16.59■□□□□ 0.25
CDK5RAP3-202ENST00000536708 PLEKHG2Q9H7P9 1386 aa16.59■□□□□ 0.25
CDK5RAP3-202ENST00000536708 MEX3CQ5U5Q3 659 aaKnown RBP16.58■□□□□ 0.25
CDK5RAP3-202ENST00000536708 CCDC9Q9Y3X0 531 aaKnown RBP16.58■□□□□ 0.25
CDK5RAP3-202ENST00000536708 HTATSF1O43719 755 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-202ENST00000536708 GLI3P10071 1580 aa16.58■□□□□ 0.24
CDK5RAP3-202ENST00000536708 SPATA31A5Q5VU36 1347 aa16.57■□□□□ 0.24
CDK5RAP3-202ENST00000536708 SPATA31A7Q8IWB4 1347 aa16.57■□□□□ 0.24
CDK5RAP3-202ENST00000536708 MRC1P22897 1456 aa16.57■□□□□ 0.24
CDK5RAP3-202ENST00000536708 UNC5CLQ8IV45 518 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms