RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 SPRYD3Q8NCJ5 442 aa10.34□□□□□ -0.75
ABCA4-207ENST00000536513 ZC3H13Q5T200 1668 aaKnown RBP10.34□□□□□ -0.75
ABCA4-207ENST00000536513 HDGFL1Q5TGJ6 251 aa10.33□□□□□ -0.76
ABCA4-207ENST00000536513 GAS2L2Q8NHY3 880 aa10.33□□□□□ -0.76
ABCA4-207ENST00000536513 NPHP3Q7Z494 1330 aa10.33□□□□□ -0.76
ABCA4-207ENST00000536513 TTC21AQ8NDW8 1320 aa10.33□□□□□ -0.76
ABCA4-207ENST00000536513 BTBD11A6QL63 1104 aa10.33□□□□□ -0.76
ABCA4-207ENST00000536513 IGSF3O75054 1194 aa10.33□□□□□ -0.76
ABCA4-207ENST00000536513 SAMD1Q6SPF0 538 aaPredicted RBP10.33□□□□□ -0.76
ABCA4-207ENST00000536513 NPC1L1Q9UHC9 1359 aa10.33□□□□□ -0.76
ABCA4-207ENST00000536513 FAM182BQ5T319 152 aa10.33□□□□□ -0.76
ABCA4-207ENST00000536513 RBM42Q9BTD8 480 aaKnown RBP10.33□□□□□ -0.76
ABCA4-207ENST00000536513 LMTK3Q96Q04 1460 aa10.33□□□□□ -0.76
ABCA4-207ENST00000536513 C3P01024 1663 aa10.33□□□□□ -0.76
ABCA4-207ENST00000536513 IGHDP01880 384 aa10.32□□□□□ -0.76
ABCA4-207ENST00000536513 TATP17735 454 aaPredicted RBP10.32□□□□□ -0.76
ABCA4-207ENST00000536513 PLEKHO1Q53GL0 409 aaPredicted RBP10.32□□□□□ -0.76
ABCA4-207ENST00000536513 ANKRD45Q5TZF3 282 aa10.32□□□□□ -0.76
ABCA4-207ENST00000536513 CHMP3Q9Y3E7 222 aa10.32□□□□□ -0.76
ABCA4-207ENST00000536513 FLT4P35916 1363 aa10.32□□□□□ -0.76
ABCA4-207ENST00000536513 ATF7IPQ6VMQ6 1270 aa10.32□□□□□ -0.76
ABCA4-207ENST00000536513 BRINP3Q76B58 766 aa10.32□□□□□ -0.76
ABCA4-207ENST00000536513 TTC5Q8N0Z6 440 aa10.32□□□□□ -0.76
ABCA4-207ENST00000536513 SIRT1Q96EB6 747 aa10.32□□□□□ -0.76
ABCA4-207ENST00000536513 BTG4Q9NY30 223 aa10.32□□□□□ -0.76
ABCA4-207ENST00000536513 CEP170BQ9Y4F5 1589 aaPredicted RBP10.32□□□□□ -0.76
ABCA4-207ENST00000536513 FAM135BQ49AJ0 1406 aa10.31□□□□□ -0.76
ABCA4-207ENST00000536513 NKTRP30414 1462 aaKnown RBP10.31□□□□□ -0.76
ABCA4-207ENST00000536513 ATP7BP35670 1465 aa10.31□□□□□ -0.76
ABCA4-207ENST00000536513 SETBP1Q9Y6X0 1596 aa10.31□□□□□ -0.76
ABCA4-207ENST00000536513 G2E3Q7L622 706 aa10.31□□□□□ -0.76
ABCA4-207ENST00000536513 NFATC2IPQ8NCF5 419 aa10.31□□□□□ -0.76
ABCA4-207ENST00000536513 OS9Q13438 667 aaPredicted RBP10.31□□□□□ -0.76
ABCA4-207ENST00000536513 ARHGEF28Q8N1W1 1705 aaKnown RBP10.31□□□□□ -0.76
ABCA4-207ENST00000536513 CD163L1Q9NR16 1453 aa10.31□□□□□ -0.76
ABCA4-207ENST00000536513 PRAMEF22A3QJZ6 481 aa10.31□□□□□ -0.76
ABCA4-207ENST00000536513 IP6K1Q92551 441 aa10.31□□□□□ -0.76
ABCA4-207ENST00000536513 ACSBG1Q96GR2 724 aa10.31□□□□□ -0.76
ABCA4-207ENST00000536513 C8orf37Q96NL8 207 aa10.31□□□□□ -0.76
ABCA4-207ENST00000536513 BRD2P25440 801 aaKnown RBP10.3□□□□□ -0.76
ABCA4-207ENST00000536513 CCDC85AQ96PX6 553 aaPredicted RBP10.3□□□□□ -0.76
ABCA4-207ENST00000536513 PCDHB15Q9Y5E8 787 aa10.3□□□□□ -0.76
ABCA4-207ENST00000536513 MEX3CQ5U5Q3 659 aaKnown RBP10.3□□□□□ -0.76
ABCA4-207ENST00000536513 BLMP54132 1417 aaPredicted RBP10.29□□□□□ -0.76
ABCA4-207ENST00000536513 PDE4AP27815 886 aa10.29□□□□□ -0.76
ABCA4-207ENST00000536513 IL17REQ8NFR9 667 aa10.29□□□□□ -0.76
ABCA4-207ENST00000536513 KIAA0232Q92628 1395 aa10.29□□□□□ -0.76
ABCA4-207ENST00000536513 CABP4P57796 275 aa10.29□□□□□ -0.76
ABCA4-207ENST00000536513 NGLY1Q96IV0 654 aa10.29□□□□□ -0.76
ABCA4-207ENST00000536513 VAMP4O75379 141 aa10.29□□□□□ -0.76
ABCA4-207ENST00000536513 HSP90AA1P07900 732 aaKnown RBP10.29□□□□□ -0.76
ABCA4-207ENST00000536513 LARP1Q6PKG0 1096 aaKnown RBP10.29□□□□□ -0.76
ABCA4-207ENST00000536513 PHAXQ9H814 394 aaKnown RBP10.29□□□□□ -0.76
ABCA4-207ENST00000536513 ZNF521Q96K83 1311 aa10.28□□□□□ -0.76
ABCA4-207ENST00000536513 RWDD1Q9H446 243 aaPredicted RBP10.28□□□□□ -0.76
ABCA4-207ENST00000536513 CPSF1Q10570 1443 aaKnown RBP10.27□□□□□ -0.76
ABCA4-207ENST00000536513 HSP90AA2PQ14568 343 aaPredicted RBP10.27□□□□□ -0.77
ABCA4-207ENST00000536513 MVPQ14764 893 aaKnown RBP10.27□□□□□ -0.77
ABCA4-207ENST00000536513 TAF7Q15545 349 aaPredicted RBP10.27□□□□□ -0.77
ABCA4-207ENST00000536513 UBR1Q8IWV7 1749 aa10.27□□□□□ -0.77
ABCA4-207ENST00000536513 SRCAPQ6ZRS2 3230 aa10.27□□□□□ -0.77
ABCA4-207ENST00000536513 MYO3AQ8NEV4 1616 aa10.27□□□□□ -0.77
ABCA4-207ENST00000536513 CNKSR2Q8WXI2 1034 aa10.27□□□□□ -0.77
ABCA4-207ENST00000536513 GZF1Q9H116 711 aaPredicted RBP10.27□□□□□ -0.77
ABCA4-207ENST00000536513 IFT57Q9NWB7 429 aa10.27□□□□□ -0.77
ABCA4-207ENST00000536513 KCNQ4P56696 695 aa10.27□□□□□ -0.77
ABCA4-207ENST00000536513 ARHGEF25Q86VW2 580 aa10.27□□□□□ -0.77
ABCA4-207ENST00000536513 TRIM44Q96DX7 344 aaPredicted RBP10.27□□□□□ -0.77
ABCA4-207ENST00000536513 SBNO1A3KN83 1393 aa10.26□□□□□ -0.77
ABCA4-207ENST00000536513 SMARCA5O60264 1052 aaPredicted RBP10.26□□□□□ -0.77
ABCA4-207ENST00000536513 MFAP1P55081 439 aaKnown RBP10.26□□□□□ -0.77
ABCA4-207ENST00000536513 PAXIP1Q6ZW49 1069 aaPredicted RBP10.26□□□□□ -0.77
ABCA4-207ENST00000536513 ARID3AQ99856 593 aa10.26□□□□□ -0.77
ABCA4-207ENST00000536513 DDX19BQ9UMR2 479 aa10.26□□□□□ -0.77
ABCA4-207ENST00000536513 TSHZ3Q63HK5 1081 aa10.26□□□□□ -0.77
ABCA4-207ENST00000536513 SLKQ9H2G2 1235 aaPredicted RBP10.26□□□□□ -0.77
ABCA4-207ENST00000536513 CHPF2Q9P2E5 772 aa10.26□□□□□ -0.77
ABCA4-207ENST00000536513 PDZRN3Q9UPQ7 1066 aa10.26□□□□□ -0.77
ABCA4-207ENST00000536513 KIF16BQ96L93 1317 aa10.26□□□□□ -0.77
ABCA4-207ENST00000536513 C9orf78Q9NZ63 289 aaPredicted RBP10.25□□□□□ -0.77
ABCA4-207ENST00000536513 LAMC1P11047 1609 aa10.25□□□□□ -0.77
ABCA4-207ENST00000536513 ADGRL3Q9HAR2 1447 aa10.25□□□□□ -0.77
ABCA4-207ENST00000536513 GOLGB1Q14789 3259 aaKnown RBP10.25□□□□□ -0.77
ABCA4-207ENST00000536513 ATP5J2-PTCD1G3V325 749 aa10.25□□□□□ -0.77
ABCA4-207ENST00000536513 RIC3Q7Z5B4 369 aa10.25□□□□□ -0.77
ABCA4-207ENST00000536513 EXOC6BQ9Y2D4 811 aa10.25□□□□□ -0.77
ABCA4-207ENST00000536513 MYOM1P52179 1685 aa10.25□□□□□ -0.77
ABCA4-207ENST00000536513 POLR1AO95602 1720 aaPredicted RBP10.25□□□□□ -0.77
ABCA4-207ENST00000536513 IFT172Q9UG01 1749 aa10.25□□□□□ -0.77
ABCA4-207ENST00000536513 NPHP1O15259 732 aa10.24□□□□□ -0.77
ABCA4-207ENST00000536513 MS4A1P11836 297 aa10.24□□□□□ -0.77
ABCA4-207ENST00000536513 NFKBIBQ15653 356 aa10.24□□□□□ -0.77
ABCA4-207ENST00000536513 CENPQQ7L2Z9 268 aaPredicted RBP10.24□□□□□ -0.77
ABCA4-207ENST00000536513 MEIS3Q99687 375 aa10.24□□□□□ -0.77
ABCA4-207ENST00000536513 UPF2Q9HAU5 1272 aaKnown RBP10.24□□□□□ -0.77
ABCA4-207ENST00000536513 SIL1Q9H173 461 aa10.24□□□□□ -0.77
ABCA4-207ENST00000536513 KIAA1210Q9ULL0 1709 aa10.24□□□□□ -0.77
ABCA4-207ENST00000536513 SPG7Q9UQ90 795 aa10.24□□□□□ -0.77
ABCA4-207ENST00000536513 REREQ9P2R6 1566 aa10.24□□□□□ -0.77
ABCA4-207ENST00000536513 PI4KAP2A4QPH2 592 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms