RNA–Protein interactions for RNA: ENST00000536187.6

CACNB3-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-202ENST00000536187 PKD1L3Q7Z443 1732 aa23.57■■□□□ 1.36
CACNB3-202ENST00000536187 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.57■■□□□ 1.36
CACNB3-202ENST00000536187 OVOS2A0A0G2JMS6 1433 aa23.56■■□□□ 1.36
CACNB3-202ENST00000536187 SPATA31A1Q5TZJ5 1347 aa23.56■■□□□ 1.36
CACNB3-202ENST00000536187 PARP4Q9UKK3 1724 aaKnown RBP23.56■■□□□ 1.36
CACNB3-202ENST00000536187 RAPGEF4Q8WZA2 1011 aa23.56■■□□□ 1.36
CACNB3-202ENST00000536187 USP21Q9UK80 565 aa23.56■■□□□ 1.36
CACNB3-202ENST00000536187 NEFMP07197 916 aa23.56■■□□□ 1.36
CACNB3-202ENST00000536187 DISP2A7MBM2 1401 aa23.55■■□□□ 1.36
CACNB3-202ENST00000536187 SPATA31A5Q5VU36 1347 aa23.55■■□□□ 1.36
CACNB3-202ENST00000536187 SPATA31A7Q8IWB4 1347 aa23.55■■□□□ 1.36
CACNB3-202ENST00000536187 TATP17735 454 aaPredicted RBP23.53■■□□□ 1.36
CACNB3-202ENST00000536187 MCM10Q7L590 875 aa23.53■■□□□ 1.36
CACNB3-202ENST00000536187 CCDC27Q2M243 656 aa23.53■■□□□ 1.36
CACNB3-202ENST00000536187 CCDC9Q9Y3X0 531 aaKnown RBP23.53■■□□□ 1.36
CACNB3-202ENST00000536187 IL2RBP14784 551 aa23.52■■□□□ 1.36
CACNB3-202ENST00000536187 ZNF530Q6P9A1 599 aaPredicted RBP23.51■■□□□ 1.35
CACNB3-202ENST00000536187 GAS2L2Q8NHY3 880 aa23.51■■□□□ 1.35
CACNB3-202ENST00000536187 VPS72Q15906 364 aa23.51■■□□□ 1.35
CACNB3-202ENST00000536187 VIRMAQ69YN4 1812 aaKnown RBP23.51■■□□□ 1.35
CACNB3-202ENST00000536187 GLI3P10071 1580 aa23.51■■□□□ 1.35
CACNB3-202ENST00000536187 CYP27B1O15528 508 aa23.5■■□□□ 1.35
CACNB3-202ENST00000536187 PLEKHO1Q53GL0 409 aaPredicted RBP23.5■■□□□ 1.35
CACNB3-202ENST00000536187 MAP3K5Q99683 1374 aa23.49■■□□□ 1.35
CACNB3-202ENST00000536187 AMOTQ4VCS5 1084 aa23.48■■□□□ 1.35
CACNB3-202ENST00000536187 IL17REQ8NFR9 667 aa23.48■■□□□ 1.35
CACNB3-202ENST00000536187 LRRC37A3O60309 1634 aa23.48■■□□□ 1.35
CACNB3-202ENST00000536187 LGR6Q9HBX8 967 aa23.47■■□□□ 1.35
CACNB3-202ENST00000536187 GNAT3A8MTJ3 354 aa23.47■■□□□ 1.35
CACNB3-202ENST00000536187 ATRNO75882 1429 aa23.47■■□□□ 1.35
CACNB3-202ENST00000536187 NCBP3Q53F19 620 aaKnown RBP23.47■■□□□ 1.35
CACNB3-202ENST00000536187 MPRIPQ6WCQ1 1025 aa23.47■■□□□ 1.35
CACNB3-202ENST00000536187 GOLGA2Q08379 1002 aa23.46■■□□□ 1.35
CACNB3-202ENST00000536187 FAM98CQ17RN3 349 aaKnown RBP23.46■■□□□ 1.35
CACNB3-202ENST00000536187 NGEFQ8N5V2 710 aa23.46■■□□□ 1.35
CACNB3-202ENST00000536187 KDM6AO15550 1401 aaPredicted RBP23.45■■□□□ 1.35
CACNB3-202ENST00000536187 PHKG2P15735 406 aa23.45■■□□□ 1.35
CACNB3-202ENST00000536187 ZCRB1Q8TBF4 217 aaKnown RBP23.45■■□□□ 1.35
CACNB3-202ENST00000536187 SLFN5Q08AF3 891 aa23.45■■□□□ 1.34
CACNB3-202ENST00000536187 AKAP4Q5JQC9 854 aa23.45■■□□□ 1.34
CACNB3-202ENST00000536187 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.45■■□□□ 1.34
CACNB3-202ENST00000536187 SPG7Q9UQ90 795 aa23.44■■□□□ 1.34
CACNB3-202ENST00000536187 ADAMTS7Q9UKP4 1686 aa23.44■■□□□ 1.34
CACNB3-202ENST00000536187 WDR63Q8IWG1 891 aa23.43■■□□□ 1.34
CACNB3-202ENST00000536187 TSR2Q969E8 191 aaKnown RBP23.43■■□□□ 1.34
CACNB3-202ENST00000536187 DUSP27Q5VZP5 1158 aa23.43■■□□□ 1.34
CACNB3-202ENST00000536187 DDX54Q8TDD1 881 aaKnown RBP23.43■■□□□ 1.34
CACNB3-202ENST00000536187 THRAP3Q9Y2W1 955 aaKnown RBP23.43■■□□□ 1.34
CACNB3-202ENST00000536187 BARGINQ6ZT62 677 aa23.42■■□□□ 1.34
CACNB3-202ENST00000536187 TRMT2AQ8IZ69 625 aaKnown RBP23.42■■□□□ 1.34
CACNB3-202ENST00000536187 C1orf141Q5JVX7 400 aa23.41■■□□□ 1.34
CACNB3-202ENST00000536187 GJD4Q96KN9 370 aaPredicted RBP23.41■■□□□ 1.34
CACNB3-202ENST00000536187 CEMIPQ8WUJ3 1361 aa23.41■■□□□ 1.34
CACNB3-202ENST00000536187 PLEKHG2Q9H7P9 1386 aa23.41■■□□□ 1.34
CACNB3-202ENST00000536187 TNS2Q63HR2 1409 aa23.41■■□□□ 1.34
CACNB3-202ENST00000536187 SCN11AQ9UI33 1791 aa23.41■■□□□ 1.34
CACNB3-202ENST00000536187 THSD7AQ9UPZ6 1657 aa23.41■■□□□ 1.34
CACNB3-202ENST00000536187 LMOD3Q0VAK6 560 aa23.41■■□□□ 1.34
CACNB3-202ENST00000536187 RTF1Q92541 710 aaKnown RBP23.41■■□□□ 1.34
CACNB3-202ENST00000536187 TOGARAM1Q9Y4F4 1720 aa23.4■■□□□ 1.34
CACNB3-202ENST00000536187 PCDH11XQ9BZA7 1347 aa23.4■■□□□ 1.34
CACNB3-202ENST00000536187 PCDH11YQ9BZA8 1340 aa23.4■■□□□ 1.34
CACNB3-202ENST00000536187 PDE3BQ13370 1112 aa23.4■■□□□ 1.34
CACNB3-202ENST00000536187 QTRT2Q9H974 415 aaKnown RBP23.4■■□□□ 1.34
CACNB3-202ENST00000536187 MIS18AQ9NYP9 233 aa23.4■■□□□ 1.34
CACNB3-202ENST00000536187 LAS1LQ9Y4W2 734 aaKnown RBP23.4■■□□□ 1.34
CACNB3-202ENST00000536187 ILDR1Q86SU0 546 aaPredicted RBP23.39■■□□□ 1.34
CACNB3-202ENST00000536187 IFNL2Q8IZJ0 200 aa23.39■■□□□ 1.34
CACNB3-202ENST00000536187 TRPC5Q9UL62 973 aaPredicted RBP23.39■■□□□ 1.34
CACNB3-202ENST00000536187 RNMTO43148 476 aaKnown RBP23.39■■□□□ 1.33
CACNB3-202ENST00000536187 RGS17Q9UGC6 210 aaPredicted RBP23.39■■□□□ 1.33
CACNB3-202ENST00000536187 FANCIQ9NVI1 1328 aa23.38■■□□□ 1.33
CACNB3-202ENST00000536187 HTATSF1O43719 755 aaKnown RBP23.38■■□□□ 1.33
CACNB3-202ENST00000536187 ZNF853P0CG23 659 aa23.38■■□□□ 1.33
CACNB3-202ENST00000536187 SIPA1L3O60292 1781 aaPredicted RBP23.37■■□□□ 1.33
CACNB3-202ENST00000536187 E9PSI1 815 aa23.37■■□□□ 1.33
CACNB3-202ENST00000536187 CENPBP07199 599 aaPredicted RBP23.37■■□□□ 1.33
CACNB3-202ENST00000536187 IL16Q14005 1332 aa23.36■■□□□ 1.33
CACNB3-202ENST00000536187 MBIPQ9NS73 344 aa23.36■■□□□ 1.33
CACNB3-202ENST00000536187 EXOC5O00471 708 aa23.35■■□□□ 1.33
CACNB3-202ENST00000536187 DDB1Q16531 1140 aa23.35■■□□□ 1.33
CACNB3-202ENST00000536187 MARCH10Q8NA82 808 aaPredicted RBP23.34■■□□□ 1.33
CACNB3-202ENST00000536187 CFAP44Q96MT7 982 aa23.34■■□□□ 1.33
CACNB3-202ENST00000536187 IFT57Q9NWB7 429 aa23.34■■□□□ 1.33
CACNB3-202ENST00000536187 EP400Q96L91 3159 aa23.33■■□□□ 1.33
CACNB3-202ENST00000536187 CDCA7Q9BWT1 371 aaPredicted RBP23.33■■□□□ 1.33
CACNB3-202ENST00000536187 A0A0G2JS52 829 aa23.32■■□□□ 1.32
CACNB3-202ENST00000536187 MYT1Q01538 1121 aa23.32■■□□□ 1.32
CACNB3-202ENST00000536187 KRT24Q2M2I5 525 aa23.32■■□□□ 1.32
CACNB3-202ENST00000536187 MRC1P22897 1456 aa23.32■■□□□ 1.32
CACNB3-202ENST00000536187 CHL1O00533 1208 aa23.32■■□□□ 1.32
CACNB3-202ENST00000536187 NKX1-1Q15270 411 aaPredicted RBP23.32■■□□□ 1.32
CACNB3-202ENST00000536187 DCAF5Q96JK2 942 aa23.32■■□□□ 1.32
CACNB3-202ENST00000536187 KDM3BQ7LBC6 1761 aa23.3■■□□□ 1.32
CACNB3-202ENST00000536187 KCNQ3O43525 872 aa23.3■■□□□ 1.32
CACNB3-202ENST00000536187 FAM182BQ5T319 152 aa23.3■■□□□ 1.32
CACNB3-202ENST00000536187 DOT1LQ8TEK3 1739 aa23.3■■□□□ 1.32
CACNB3-202ENST00000536187 GNAI1P63096 354 aa23.3■■□□□ 1.32
CACNB3-202ENST00000536187 ONECUT3O60422 494 aaPredicted RBP23.29■■□□□ 1.32
CACNB3-202ENST00000536187 EXOSC9Q06265 439 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms