RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 MIS18AQ9NYP9 233 aa16.89■□□□□ 0.29
VPS33B-202ENST00000535906 C1orf115Q9H7X2 142 aa16.89■□□□□ 0.29
VPS33B-202ENST00000535906 KIF24Q5T7B8 1368 aa16.88■□□□□ 0.29
VPS33B-202ENST00000535906 KIAA0232Q92628 1395 aa16.88■□□□□ 0.29
VPS33B-202ENST00000535906 API5Q9BZZ5 524 aaKnown RBP16.88■□□□□ 0.29
VPS33B-202ENST00000535906 ADGRL3Q9HAR2 1447 aa16.88■□□□□ 0.29
VPS33B-202ENST00000535906 RTF1Q92541 710 aaKnown RBP16.88■□□□□ 0.29
VPS33B-202ENST00000535906 ESCO1Q5FWF5 840 aa16.87■□□□□ 0.29
VPS33B-202ENST00000535906 CHMP4BQ9H444 224 aaKnown RBP16.87■□□□□ 0.29
VPS33B-202ENST00000535906 NPHP4O75161 1426 aaPredicted RBP16.87■□□□□ 0.29
VPS33B-202ENST00000535906 NWD1Q149M9 1564 aa16.87■□□□□ 0.29
VPS33B-202ENST00000535906 NUCB1Q02818 461 aa16.86■□□□□ 0.29
VPS33B-202ENST00000535906 GAS2L2Q8NHY3 880 aa16.86■□□□□ 0.29
VPS33B-202ENST00000535906 LTV1Q96GA3 475 aaPredicted RBP16.86■□□□□ 0.29
VPS33B-202ENST00000535906 HAP1P54257 671 aaPredicted RBP16.86■□□□□ 0.29
VPS33B-202ENST00000535906 SIRT2Q8IXJ6 389 aa16.85■□□□□ 0.29
VPS33B-202ENST00000535906 PSME1Q06323 249 aa16.85■□□□□ 0.29
VPS33B-202ENST00000535906 TSPYL4Q9UJ04 414 aa16.85■□□□□ 0.29
VPS33B-202ENST00000535906 RGS12O14924 1447 aa16.84■□□□□ 0.29
VPS33B-202ENST00000535906 LNPKQ9C0E8 428 aa16.84■□□□□ 0.29
VPS33B-202ENST00000535906 LTN1O94822 1766 aa16.83■□□□□ 0.29
VPS33B-202ENST00000535906 CHD1LQ86WJ1 897 aa16.83■□□□□ 0.28
VPS33B-202ENST00000535906 NFKBIBQ15653 356 aa16.82■□□□□ 0.28
VPS33B-202ENST00000535906 INTS3Q68E01 1043 aaKnown RBP16.82■□□□□ 0.28
VPS33B-202ENST00000535906 USHBP1Q8N6Y0 703 aa16.82■□□□□ 0.28
VPS33B-202ENST00000535906 ORAI2Q96SN7 254 aa16.82■□□□□ 0.28
VPS33B-202ENST00000535906 RTL1A6NKG5 1358 aa16.82■□□□□ 0.28
VPS33B-202ENST00000535906 GNAT3A8MTJ3 354 aa16.81■□□□□ 0.28
VPS33B-202ENST00000535906 HTATSF1O43719 755 aaKnown RBP16.81■□□□□ 0.28
VPS33B-202ENST00000535906 NFAT5O94916 1531 aa16.81■□□□□ 0.28
VPS33B-202ENST00000535906 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
VPS33B-202ENST00000535906 IP6K1Q92551 441 aa16.81■□□□□ 0.28
VPS33B-202ENST00000535906 GCC1Q96CN9 775 aa16.81■□□□□ 0.28
VPS33B-202ENST00000535906 ANKRD45Q5TZF3 282 aa16.8■□□□□ 0.28
VPS33B-202ENST00000535906 TBC1D32Q96NH3 1257 aa16.8■□□□□ 0.28
VPS33B-202ENST00000535906 PTPRCP08575 1304 aa16.8■□□□□ 0.28
VPS33B-202ENST00000535906 IL17REQ8NFR9 667 aa16.79■□□□□ 0.28
VPS33B-202ENST00000535906 UPF2Q9HAU5 1272 aaKnown RBP16.79■□□□□ 0.28
VPS33B-202ENST00000535906 LRRC37A3O60309 1634 aa16.79■□□□□ 0.28
VPS33B-202ENST00000535906 XPCQ01831 940 aaPredicted RBP16.79■□□□□ 0.28
VPS33B-202ENST00000535906 MSH6P52701 1360 aa16.78■□□□□ 0.28
VPS33B-202ENST00000535906 NBPF6Q5VWK0 638 aa16.78■□□□□ 0.28
VPS33B-202ENST00000535906 G2E3Q7L622 706 aa16.78■□□□□ 0.28
VPS33B-202ENST00000535906 NBPF4Q96M43 638 aa16.78■□□□□ 0.28
VPS33B-202ENST00000535906 MAP3K5Q99683 1374 aa16.78■□□□□ 0.28
VPS33B-202ENST00000535906 KCNH5Q8NCM2 988 aa16.77■□□□□ 0.28
VPS33B-202ENST00000535906 ZBTB7CA1YPR0 619 aa16.77■□□□□ 0.27
VPS33B-202ENST00000535906 BECN1Q14457 450 aa16.76■□□□□ 0.27
VPS33B-202ENST00000535906 PROSER2Q86WR7 435 aaPredicted RBP16.76■□□□□ 0.27
VPS33B-202ENST00000535906 PLEKHG5O94827 1062 aa16.75■□□□□ 0.27
VPS33B-202ENST00000535906 ATP10DQ9P241 1426 aa16.74■□□□□ 0.27
VPS33B-202ENST00000535906 GCP02774 474 aa16.74■□□□□ 0.27
VPS33B-202ENST00000535906 MFAP1P55081 439 aaKnown RBP16.74■□□□□ 0.27
VPS33B-202ENST00000535906 TAF7Q15545 349 aaPredicted RBP16.74■□□□□ 0.27
VPS33B-202ENST00000535906 MEIS3Q99687 375 aa16.74■□□□□ 0.27
VPS33B-202ENST00000535906 F6X3S4 739 aa16.74■□□□□ 0.27
VPS33B-202ENST00000535906 RGPD2P0DJD1 1756 aa16.73■□□□□ 0.27
VPS33B-202ENST00000535906 ANKRD44Q8N8A2 993 aa16.73■□□□□ 0.27
VPS33B-202ENST00000535906 LRRC59Q96AG4 307 aaKnown RBP16.73■□□□□ 0.27
VPS33B-202ENST00000535906 DCTPP1Q9H773 170 aa16.73■□□□□ 0.27
VPS33B-202ENST00000535906 PHRF1Q9P1Y6 1649 aaKnown RBP16.73■□□□□ 0.27
VPS33B-202ENST00000535906 BMP2KLQ5H9B9 411 aa16.72■□□□□ 0.27
VPS33B-202ENST00000535906 LMOD2Q6P5Q4 547 aa16.72■□□□□ 0.27
VPS33B-202ENST00000535906 CEP85Q6P2H3 762 aa16.72■□□□□ 0.27
VPS33B-202ENST00000535906 SLC4A10Q6U841 1118 aa16.72■□□□□ 0.27
VPS33B-202ENST00000535906 ARHGEF25Q86VW2 580 aa16.72■□□□□ 0.27
VPS33B-202ENST00000535906 NECTIN2Q92692 538 aa16.72■□□□□ 0.27
VPS33B-202ENST00000535906 STK31Q9BXU1 1019 aa16.72■□□□□ 0.27
VPS33B-202ENST00000535906 C22orf23Q9BZE7 217 aa16.71■□□□□ 0.27
VPS33B-202ENST00000535906 RPAP2Q8IXW5 612 aaPredicted RBP16.71■□□□□ 0.27
VPS33B-202ENST00000535906 BABAM1Q9NWV8 329 aa16.71■□□□□ 0.27
VPS33B-202ENST00000535906 GSE1Q14687 1217 aa16.7■□□□□ 0.26
VPS33B-202ENST00000535906 CCDC30Q5VVM6 783 aa16.7■□□□□ 0.26
VPS33B-202ENST00000535906 KRT28Q7Z3Y7 464 aa16.7■□□□□ 0.26
VPS33B-202ENST00000535906 C19orf44Q9H6X5 657 aa16.7■□□□□ 0.26
VPS33B-202ENST00000535906 CEMIPQ8WUJ3 1361 aa16.7■□□□□ 0.26
VPS33B-202ENST00000535906 SLIT3O75094 1523 aa16.7■□□□□ 0.26
VPS33B-202ENST00000535906 LGR6Q9HBX8 967 aa16.7■□□□□ 0.26
VPS33B-202ENST00000535906 C1orf167Q5SNV9 1468 aa16.7■□□□□ 0.26
VPS33B-202ENST00000535906 TRPM3Q9HCF6 1732 aaPredicted RBP16.69■□□□□ 0.26
VPS33B-202ENST00000535906 FRAT2O75474 233 aaPredicted RBP16.69■□□□□ 0.26
VPS33B-202ENST00000535906 FLIIQ13045 1269 aa16.69■□□□□ 0.26
VPS33B-202ENST00000535906 FAM208AQ9UK61 1670 aaKnown RBP16.69■□□□□ 0.26
VPS33B-202ENST00000535906 CCT4P50991 539 aaKnown RBP16.69■□□□□ 0.26
VPS33B-202ENST00000535906 TBC1D2Q9BYX2 928 aa16.68■□□□□ 0.26
VPS33B-202ENST00000535906 AXIN2Q9Y2T1 843 aa16.68■□□□□ 0.26
VPS33B-202ENST00000535906 FKBP5Q13451 457 aaPredicted RBP16.67■□□□□ 0.26
VPS33B-202ENST00000535906 SOS1Q07889 1333 aaPredicted RBP16.67■□□□□ 0.26
VPS33B-202ENST00000535906 PLEKHM2Q8IWE5 1019 aa16.67■□□□□ 0.26
VPS33B-202ENST00000535906 C16orf71Q8IYS4 520 aaPredicted RBP16.66■□□□□ 0.26
VPS33B-202ENST00000535906 ANKRD24Q8TF21 1146 aa16.66■□□□□ 0.26
VPS33B-202ENST00000535906 CACNA1FO60840 1977 aa16.66■□□□□ 0.26
VPS33B-202ENST00000535906 DNAJC5Q9H3Z4 198 aa16.66■□□□□ 0.26
VPS33B-202ENST00000535906 MED1Q15648 1581 aaPredicted RBP16.65■□□□□ 0.26
VPS33B-202ENST00000535906 ZNF530Q6P9A1 599 aaPredicted RBP16.65■□□□□ 0.26
VPS33B-202ENST00000535906 KIF1AQ12756 1690 aa16.65■□□□□ 0.26
VPS33B-202ENST00000535906 GSPT1P15170 499 aaKnown RBP16.65■□□□□ 0.26
VPS33B-202ENST00000535906 AKAP4Q5JQC9 854 aa16.65■□□□□ 0.26
VPS33B-202ENST00000535906 NCAPD2Q15021 1401 aa16.64■□□□□ 0.25
VPS33B-202ENST00000535906 PLEKHO1Q53GL0 409 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 420.9 ms