RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.56□□□□□ -1.04
CDCA3-205ENST00000535871 LMO7Q8WWI1 1683 aa8.56□□□□□ -1.04
CDCA3-205ENST00000535871 IL16Q14005 1332 aa8.55□□□□□ -1.04
CDCA3-205ENST00000535871 MAPK8IP3Q9UPT6 1336 aa8.55□□□□□ -1.04
CDCA3-205ENST00000535871 U2SURPO15042 1029 aaKnown RBP8.55□□□□□ -1.04
CDCA3-205ENST00000535871 NUTM2GQ5VZR2 741 aa8.55□□□□□ -1.04
CDCA3-205ENST00000535871 WDR63Q8IWG1 891 aa8.55□□□□□ -1.04
CDCA3-205ENST00000535871 DDX17Q92841 729 aaKnown RBP8.55□□□□□ -1.04
CDCA3-205ENST00000535871 COL14A1Q05707 1796 aaKnown RBP8.54□□□□□ -1.04
CDCA3-205ENST00000535871 KIAA0232Q92628 1395 aa8.54□□□□□ -1.04
CDCA3-205ENST00000535871 NUBP1P53384 320 aa8.54□□□□□ -1.04
CDCA3-205ENST00000535871 AMOTQ4VCS5 1084 aa8.54□□□□□ -1.04
CDCA3-205ENST00000535871 EYA1Q99502 592 aa8.54□□□□□ -1.04
CDCA3-205ENST00000535871 APAF1O14727 1248 aa8.53□□□□□ -1.04
CDCA3-205ENST00000535871 FBLN1P23142 703 aa8.53□□□□□ -1.04
CDCA3-205ENST00000535871 NFE2L2Q16236 605 aa8.53□□□□□ -1.04
CDCA3-205ENST00000535871 TCP11L2Q8N4U5 519 aa8.53□□□□□ -1.04
CDCA3-205ENST00000535871 GAS2L2Q8NHY3 880 aa8.53□□□□□ -1.04
CDCA3-205ENST00000535871 PRDM11Q9NQV5 511 aa8.53□□□□□ -1.04
CDCA3-205ENST00000535871 WDR17Q8IZU2 1322 aa8.53□□□□□ -1.04
CDCA3-205ENST00000535871 PRKAR2BP31323 418 aa8.52□□□□□ -1.05
CDCA3-205ENST00000535871 TMPOP42166 694 aaKnown RBP8.52□□□□□ -1.05
CDCA3-205ENST00000535871 ZC3H6P61129 1189 aaKnown RBP8.52□□□□□ -1.05
CDCA3-205ENST00000535871 SULT6B1Q6IMI4 303 aa8.52□□□□□ -1.05
CDCA3-205ENST00000535871 WWC1Q8IX03 1113 aa8.52□□□□□ -1.05
CDCA3-205ENST00000535871 TRMT2AQ8IZ69 625 aaKnown RBP8.52□□□□□ -1.05
CDCA3-205ENST00000535871 ANKRD24Q8TF21 1146 aa8.52□□□□□ -1.05
CDCA3-205ENST00000535871 RYDENQ9NUL5 291 aaKnown RBP8.52□□□□□ -1.05
CDCA3-205ENST00000535871 BABAM1Q9NWV8 329 aa8.52□□□□□ -1.05
CDCA3-205ENST00000535871 OVOS2A0A0G2JMS6 1433 aa8.52□□□□□ -1.05
CDCA3-205ENST00000535871 NWD2Q9ULI1 1742 aa8.51□□□□□ -1.05
CDCA3-205ENST00000535871 COL5A2P05997 1499 aaPredicted RBP8.51□□□□□ -1.05
CDCA3-205ENST00000535871 E9PSI1 815 aa8.51□□□□□ -1.05
CDCA3-205ENST00000535871 CT47B1P0C2W7 299 aaPredicted RBP8.51□□□□□ -1.05
CDCA3-205ENST00000535871 GOLGA2Q08379 1002 aa8.51□□□□□ -1.05
CDCA3-205ENST00000535871 CDCA7Q9BWT1 371 aaPredicted RBP8.51□□□□□ -1.05
CDCA3-205ENST00000535871 CARD10Q9BWT7 1032 aa8.51□□□□□ -1.05
CDCA3-205ENST00000535871 AXIN2Q9Y2T1 843 aa8.51□□□□□ -1.05
CDCA3-205ENST00000535871 THRAP3Q9Y2W1 955 aaKnown RBP8.51□□□□□ -1.05
CDCA3-205ENST00000535871 SOX12O15370 315 aa8.5□□□□□ -1.05
CDCA3-205ENST00000535871 PIP4K2BP78356 416 aa8.5□□□□□ -1.05
CDCA3-205ENST00000535871 NBPF6Q5VWK0 638 aa8.5□□□□□ -1.05
CDCA3-205ENST00000535871 CABLES1Q8TDN4 633 aa8.5□□□□□ -1.05
CDCA3-205ENST00000535871 FAM212AQ96EL1 285 aa8.5□□□□□ -1.05
CDCA3-205ENST00000535871 NBPF4Q96M43 638 aa8.5□□□□□ -1.05
CDCA3-205ENST00000535871 STK24Q9Y6E0 443 aa8.5□□□□□ -1.05
CDCA3-205ENST00000535871 SLIT2O94813 1529 aa8.49□□□□□ -1.05
CDCA3-205ENST00000535871 CRB1P82279 1406 aa8.49□□□□□ -1.05
CDCA3-205ENST00000535871 FAM83GA6ND36 823 aa8.49□□□□□ -1.05
CDCA3-205ENST00000535871 PLEKHO1Q53GL0 409 aaPredicted RBP8.49□□□□□ -1.05
CDCA3-205ENST00000535871 ZNF428Q96B54 188 aa8.49□□□□□ -1.05
CDCA3-205ENST00000535871 YTHDC1Q96MU7 727 aaKnown RBP8.49□□□□□ -1.05
CDCA3-205ENST00000535871 MYH16Q9H6N6 1097 aa8.49□□□□□ -1.05
CDCA3-205ENST00000535871 SOS1Q07889 1333 aaPredicted RBP8.49□□□□□ -1.05
CDCA3-205ENST00000535871 HMOX1P09601 288 aa8.48□□□□□ -1.05
CDCA3-205ENST00000535871 RIPK4P57078 832 aa8.48□□□□□ -1.05
CDCA3-205ENST00000535871 SLFN5Q08AF3 891 aa8.48□□□□□ -1.05
CDCA3-205ENST00000535871 CCDC146Q8IYE0 955 aa8.48□□□□□ -1.05
CDCA3-205ENST00000535871 FNBP4Q8N3X1 1017 aaPredicted RBP8.48□□□□□ -1.05
CDCA3-205ENST00000535871 RAPGEF4Q8WZA2 1011 aa8.48□□□□□ -1.05
CDCA3-205ENST00000535871 PHACTR3Q96KR7 559 aa8.48□□□□□ -1.05
CDCA3-205ENST00000535871 CHMP4AQ9BY43 222 aa8.48□□□□□ -1.05
CDCA3-205ENST00000535871 TRIM35Q9UPQ4 493 aa8.48□□□□□ -1.05
CDCA3-205ENST00000535871 RGPD5Q99666 1765 aa8.48□□□□□ -1.05
CDCA3-205ENST00000535871 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.47□□□□□ -1.05
CDCA3-205ENST00000535871 HSP90AB1P08238 724 aaKnown RBP8.47□□□□□ -1.05
CDCA3-205ENST00000535871 TATP17735 454 aaPredicted RBP8.47□□□□□ -1.05
CDCA3-205ENST00000535871 AKAP4Q5JQC9 854 aa8.47□□□□□ -1.05
CDCA3-205ENST00000535871 BCL11BQ9C0K0 894 aaPredicted RBP8.47□□□□□ -1.05
CDCA3-205ENST00000535871 IFT57Q9NWB7 429 aa8.47□□□□□ -1.05
CDCA3-205ENST00000535871 SPG7Q9UQ90 795 aa8.47□□□□□ -1.05
CDCA3-205ENST00000535871 CEMIPQ8WUJ3 1361 aa8.47□□□□□ -1.05
CDCA3-205ENST00000535871 MAP3K5Q99683 1374 aa8.47□□□□□ -1.05
CDCA3-205ENST00000535871 PLCH1Q4KWH8 1693 aa8.46□□□□□ -1.05
CDCA3-205ENST00000535871 ADAMTS7Q9UKP4 1686 aa8.46□□□□□ -1.05
CDCA3-205ENST00000535871 PKD1L3Q7Z443 1732 aa8.46□□□□□ -1.05
CDCA3-205ENST00000535871 PARP4Q9UKK3 1724 aaKnown RBP8.46□□□□□ -1.05
CDCA3-205ENST00000535871 GNAT3A8MTJ3 354 aa8.46□□□□□ -1.06
CDCA3-205ENST00000535871 ZNF853P0CG23 659 aa8.46□□□□□ -1.06
CDCA3-205ENST00000535871 CSB-PGBD3P0DP91 1061 aa8.46□□□□□ -1.06
CDCA3-205ENST00000535871 EVA1CP58658 441 aa8.46□□□□□ -1.06
CDCA3-205ENST00000535871 GNAI1P63096 354 aa8.46□□□□□ -1.06
CDCA3-205ENST00000535871 DUSP27Q5VZP5 1158 aa8.46□□□□□ -1.06
CDCA3-205ENST00000535871 BARGINQ6ZT62 677 aa8.46□□□□□ -1.06
CDCA3-205ENST00000535871 AEBP1Q8IUX7 1158 aa8.46□□□□□ -1.06
CDCA3-205ENST00000535871 RTF1Q92541 710 aaKnown RBP8.46□□□□□ -1.06
CDCA3-205ENST00000535871 NLRP2Q9NX02 1062 aa8.46□□□□□ -1.06
CDCA3-205ENST00000535871 DAXXQ9UER7 740 aaPredicted RBP8.46□□□□□ -1.06
CDCA3-205ENST00000535871 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.45□□□□□ -1.06
CDCA3-205ENST00000535871 IL2RBP14784 551 aa8.45□□□□□ -1.06
CDCA3-205ENST00000535871 CHRNA2Q15822 529 aa8.45□□□□□ -1.06
CDCA3-205ENST00000535871 MTHFSDQ2M296 383 aaKnown RBP8.45□□□□□ -1.06
CDCA3-205ENST00000535871 TOM1L2Q6ZVM7 507 aa8.45□□□□□ -1.06
CDCA3-205ENST00000535871 UNC5CLQ8IV45 518 aa8.45□□□□□ -1.06
CDCA3-205ENST00000535871 LTV1Q96GA3 475 aaPredicted RBP8.45□□□□□ -1.06
CDCA3-205ENST00000535871 ZFP91Q96JP5 570 aaPredicted RBP8.45□□□□□ -1.06
CDCA3-205ENST00000535871 BTG4Q9NY30 223 aa8.45□□□□□ -1.06
CDCA3-205ENST00000535871 NRAPQ86VF7 1730 aa8.45□□□□□ -1.06
CDCA3-205ENST00000535871 DISP2A7MBM2 1401 aa8.45□□□□□ -1.06
CDCA3-205ENST00000535871 DLG5Q8TDM6 1919 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms