RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 BCL11BQ9C0K0 894 aaPredicted RBP29.47■■■□□ 2.31
SSPN-204ENST00000535504 DDX10Q13206 875 aaKnown RBP29.46■■■□□ 2.31
SSPN-204ENST00000535504 KAT6BQ8WYB5 2073 aa29.46■■■□□ 2.31
SSPN-204ENST00000535504 IGSF1Q8N6C5 1336 aa29.45■■■□□ 2.3
SSPN-204ENST00000535504 DIAPH1O60610 1272 aaKnown RBP29.44■■■□□ 2.3
SSPN-204ENST00000535504 EN1Q05925 392 aaPredicted RBP29.44■■■□□ 2.3
SSPN-204ENST00000535504 TNS1Q9HBL0 1735 aaKnown RBP29.44■■■□□ 2.3
SSPN-204ENST00000535504 NCAPD2Q15021 1401 aa29.44■■■□□ 2.3
SSPN-204ENST00000535504 PARD3Q8TEW0 1356 aa29.43■■■□□ 2.3
SSPN-204ENST00000535504 PLEKHG2Q9H7P9 1386 aa29.42■■■□□ 2.3
SSPN-204ENST00000535504 SBF2Q86WG5 1849 aa29.41■■■□□ 2.3
SSPN-204ENST00000535504 ACSBG1Q96GR2 724 aa29.41■■■□□ 2.3
SSPN-204ENST00000535504 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.4■■■□□ 2.3
SSPN-204ENST00000535504 IL13P35225 146 aa29.39■■■□□ 2.3
SSPN-204ENST00000535504 PLEKHO1Q53GL0 409 aaPredicted RBP29.38■■■□□ 2.29
SSPN-204ENST00000535504 SYTL4Q96C24 671 aaPredicted RBP29.38■■■□□ 2.29
SSPN-204ENST00000535504 NUDCQ9Y266 331 aa29.38■■■□□ 2.29
SSPN-204ENST00000535504 SULT6B1Q6IMI4 303 aa29.37■■■□□ 2.29
SSPN-204ENST00000535504 PPP2R1AP30153 589 aa29.36■■■□□ 2.29
SSPN-204ENST00000535504 AMOTQ4VCS5 1084 aa29.36■■■□□ 2.29
SSPN-204ENST00000535504 NHSQ6T4R5 1651 aa29.35■■■□□ 2.29
SSPN-204ENST00000535504 EZH2Q15910 746 aaKnown RBP29.35■■■□□ 2.29
SSPN-204ENST00000535504 U2SURPO15042 1029 aaKnown RBP29.34■■■□□ 2.29
SSPN-204ENST00000535504 PLSCR1O15162 318 aa29.34■■■□□ 2.29
SSPN-204ENST00000535504 RALBP1Q15311 655 aa29.34■■■□□ 2.29
SSPN-204ENST00000535504 IFNL2Q8IZJ0 200 aa29.34■■■□□ 2.29
SSPN-204ENST00000535504 PKD1L3Q7Z443 1732 aa29.34■■■□□ 2.29
SSPN-204ENST00000535504 CAMKK2Q96RR4 588 aa29.33■■■□□ 2.29
SSPN-204ENST00000535504 SHANK3Q9BYB0 1731 aa29.32■■■□□ 2.28
SSPN-204ENST00000535504 ZNF316A6NFI3 1004 aaPredicted RBP29.31■■■□□ 2.28
SSPN-204ENST00000535504 KCNQ2O43526 872 aa29.31■■■□□ 2.28
SSPN-204ENST00000535504 HSP90AB1P08238 724 aaKnown RBP29.31■■■□□ 2.28
SSPN-204ENST00000535504 NBPF14Q5TI25 921 aa29.31■■■□□ 2.28
SSPN-204ENST00000535504 C1orf141Q5JVX7 400 aa29.3■■■□□ 2.28
SSPN-204ENST00000535504 PRIM1P49642 420 aaKnown RBP29.29■■■□□ 2.28
SSPN-204ENST00000535504 AEBP1Q8IUX7 1158 aa29.29■■■□□ 2.28
SSPN-204ENST00000535504 RGPD3A6NKT7 1758 aaPredicted RBP29.29■■■□□ 2.28
SSPN-204ENST00000535504 RGPD4Q7Z3J3 1758 aa29.29■■■□□ 2.28
SSPN-204ENST00000535504 KDRP35968 1356 aa29.28■■■□□ 2.28
SSPN-204ENST00000535504 CYP27B1O15528 508 aa29.28■■■□□ 2.28
SSPN-204ENST00000535504 HMOX1P09601 288 aa29.28■■■□□ 2.28
SSPN-204ENST00000535504 DOT1LQ8TEK3 1739 aa29.28■■■□□ 2.28
SSPN-204ENST00000535504 ZNF530Q6P9A1 599 aaPredicted RBP29.27■■■□□ 2.28
SSPN-204ENST00000535504 PHKG2P15735 406 aa29.25■■■□□ 2.27
SSPN-204ENST00000535504 PTF1AQ7RTS3 328 aa29.25■■■□□ 2.27
SSPN-204ENST00000535504 COL3A1P02461 1466 aaPredicted RBP29.24■■■□□ 2.27
SSPN-204ENST00000535504 BTAF1O14981 1849 aa29.23■■■□□ 2.27
SSPN-204ENST00000535504 NKX1-1Q15270 411 aaPredicted RBP29.23■■■□□ 2.27
SSPN-204ENST00000535504 HMGB2P26583 209 aaKnown RBP29.22■■■□□ 2.27
SSPN-204ENST00000535504 U2AF1L5P0DN76 240 aaPredicted RBP29.21■■■□□ 2.27
SSPN-204ENST00000535504 U2AF1Q01081 240 aaKnown RBP eCLIP29.21■■■□□ 2.27
SSPN-204ENST00000535504 MPRIPQ6WCQ1 1025 aa29.21■■■□□ 2.27
SSPN-204ENST00000535504 RREB1Q92766 1687 aa29.21■■■□□ 2.27
SSPN-204ENST00000535504 NEFMP07197 916 aa29.2■■■□□ 2.26
SSPN-204ENST00000535504 TXNRD1Q16881 649 aa29.2■■■□□ 2.26
SSPN-204ENST00000535504 DCAF5Q96JK2 942 aa29.2■■■□□ 2.26
SSPN-204ENST00000535504 TMOD3Q9NYL9 352 aa29.19■■■□□ 2.26
SSPN-204ENST00000535504 MYBBP1AQ9BQG0 1328 aaKnown RBP29.19■■■□□ 2.26
SSPN-204ENST00000535504 SMARCC1Q92922 1105 aaPredicted RBP29.17■■■□□ 2.26
SSPN-204ENST00000535504 SLC27A3Q5K4L6 730 aa29.16■■■□□ 2.26
SSPN-204ENST00000535504 NUP188Q5SRE5 1749 aa29.15■■■□□ 2.26
SSPN-204ENST00000535504 AKAP4Q5JQC9 854 aa29.15■■■□□ 2.26
SSPN-204ENST00000535504 GAS2L2Q8NHY3 880 aa29.15■■■□□ 2.26
SSPN-204ENST00000535504 ERVV-2B6SEH9 535 aa29.14■■■□□ 2.26
SSPN-204ENST00000535504 STK32BQ9NY57 414 aa29.14■■■□□ 2.26
SSPN-204ENST00000535504 PNNQ9H307 717 aaKnown RBP29.13■■■□□ 2.25
SSPN-204ENST00000535504 PSDA5PKW4 1024 aaPredicted RBP29.12■■■□□ 2.25
SSPN-204ENST00000535504 CABP4P57796 275 aa29.12■■■□□ 2.25
SSPN-204ENST00000535504 R3HDM1Q15032 1099 aaKnown RBP29.12■■■□□ 2.25
SSPN-204ENST00000535504 FCHSD2O94868 740 aa29.11■■■□□ 2.25
SSPN-204ENST00000535504 PRKAR2BP31323 418 aa29.11■■■□□ 2.25
SSPN-204ENST00000535504 ITGB4P16144 1822 aa29.1■■■□□ 2.25
SSPN-204ENST00000535504 TOGARAM1Q9Y4F4 1720 aa29.09■■■□□ 2.25
SSPN-204ENST00000535504 CCNL1Q9UK58 526 aaPredicted RBP29.09■■■□□ 2.25
SSPN-204ENST00000535504 MTHFSDQ2M296 383 aaKnown RBP29.08■■■□□ 2.25
SSPN-204ENST00000535504 PROM2Q8N271 834 aa29.08■■■□□ 2.25
SSPN-204ENST00000535504 PIGBQ92521 554 aa29.08■■■□□ 2.25
SSPN-204ENST00000535504 PRKRIP1Q9H875 184 aaPredicted RBP29.08■■■□□ 2.25
SSPN-204ENST00000535504 PALLDQ8WX93 1383 aa29.08■■■□□ 2.25
SSPN-204ENST00000535504 RSPH6AQ9H0K4 717 aa29.07■■■□□ 2.24
SSPN-204ENST00000535504 GNAT3A8MTJ3 354 aa29.03■■■□□ 2.24
SSPN-204ENST00000535504 ANP32CO43423 234 aa29.03■■■□□ 2.24
SSPN-204ENST00000535504 WDR43Q15061 677 aaKnown RBP eCLIP29.03■■■□□ 2.24
SSPN-204ENST00000535504 LY75O60449 1722 aa29.03■■■□□ 2.24
SSPN-204ENST00000535504 KDM6AO15550 1401 aaPredicted RBP29.03■■■□□ 2.24
SSPN-204ENST00000535504 MAP3K5Q99683 1374 aa29.02■■■□□ 2.24
SSPN-204ENST00000535504 MAPK8IP3Q9UPT6 1336 aa29.02■■■□□ 2.24
SSPN-204ENST00000535504 SLC15A2Q16348 729 aa29.01■■■□□ 2.23
SSPN-204ENST00000535504 RTF1Q92541 710 aaKnown RBP29.01■■■□□ 2.23
SSPN-204ENST00000535504 RNMTO43148 476 aaKnown RBP29■■■□□ 2.23
SSPN-204ENST00000535504 SCN11AQ9UI33 1791 aa28.99■■■□□ 2.23
SSPN-204ENST00000535504 ANO8Q9HCE9 1232 aaPredicted RBP28.99■■■□□ 2.23
SSPN-204ENST00000535504 TEFQ10587 303 aa28.98■■■□□ 2.23
SSPN-204ENST00000535504 NFATC2IPQ8NCF5 419 aa28.98■■■□□ 2.23
SSPN-204ENST00000535504 SLC52A2Q9HAB3 445 aa28.98■■■□□ 2.23
SSPN-204ENST00000535504 LRRC4BQ9NT99 713 aa28.98■■■□□ 2.23
SSPN-204ENST00000535504 ASAP1Q9ULH1 1129 aa28.97■■■□□ 2.23
SSPN-204ENST00000535504 LOC102724428A0A0B4J2F2 783 aa28.96■■■□□ 2.23
SSPN-204ENST00000535504 SIK1P57059 783 aa28.96■■■□□ 2.23
SSPN-204ENST00000535504 PHACTR3Q96KR7 559 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms