RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 PROM2Q8N271 834 aa16.24■□□□□ 0.19
KNTC1-208ENST00000535410 SYTL4Q96C24 671 aaPredicted RBP16.24■□□□□ 0.19
KNTC1-208ENST00000535410 POLKQ9UBT6 870 aa16.24■□□□□ 0.19
KNTC1-208ENST00000535410 RGPD3A6NKT7 1758 aaPredicted RBP16.23■□□□□ 0.19
KNTC1-208ENST00000535410 RGPD4Q7Z3J3 1758 aa16.23■□□□□ 0.19
KNTC1-208ENST00000535410 PCDH11XQ9BZA7 1347 aa16.23■□□□□ 0.19
KNTC1-208ENST00000535410 PCDH11YQ9BZA8 1340 aa16.23■□□□□ 0.19
KNTC1-208ENST00000535410 TNNT2P45379 298 aaPredicted RBP16.23■□□□□ 0.19
KNTC1-208ENST00000535410 PRIM1P49642 420 aaKnown RBP16.23■□□□□ 0.19
KNTC1-208ENST00000535410 SLC27A3Q5K4L6 730 aa16.23■□□□□ 0.19
KNTC1-208ENST00000535410 USHBP1Q8N6Y0 703 aa16.23■□□□□ 0.19
KNTC1-208ENST00000535410 SPG7Q9UQ90 795 aa16.23■□□□□ 0.19
KNTC1-208ENST00000535410 SBF2Q86WG5 1849 aa16.23■□□□□ 0.19
KNTC1-208ENST00000535410 RREB1Q92766 1687 aa16.22■□□□□ 0.19
KNTC1-208ENST00000535410 LRP5O75197 1615 aa16.22■□□□□ 0.19
KNTC1-208ENST00000535410 SLC15A2Q16348 729 aa16.21■□□□□ 0.19
KNTC1-208ENST00000535410 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.21■□□□□ 0.194e-7■■■□□ 17.9
KNTC1-208ENST00000535410 PPP1R1BQ9UD71 204 aaPredicted RBP16.2■□□□□ 0.18
KNTC1-208ENST00000535410 MEGF6O75095 1541 aa16.19■□□□□ 0.18
KNTC1-208ENST00000535410 NUP188Q5SRE5 1749 aa16.19■□□□□ 0.18
KNTC1-208ENST00000535410 EYA1Q99502 592 aa16.19■□□□□ 0.18
KNTC1-208ENST00000535410 KIF7Q2M1P5 1343 aa16.19■□□□□ 0.18
KNTC1-208ENST00000535410 KAT6BQ8WYB5 2073 aa16.18■□□□□ 0.18
KNTC1-208ENST00000535410 NHSQ6T4R5 1651 aa16.18■□□□□ 0.18
KNTC1-208ENST00000535410 ANO8Q9HCE9 1232 aaPredicted RBP16.18■□□□□ 0.18
KNTC1-208ENST00000535410 PLEKHG2Q9H7P9 1386 aa16.16■□□□□ 0.18
KNTC1-208ENST00000535410 EIF4A2Q14240 407 aaKnown RBP16.16■□□□□ 0.18
KNTC1-208ENST00000535410 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
KNTC1-208ENST00000535410 SMARCC1Q92922 1105 aaPredicted RBP16.15■□□□□ 0.18
KNTC1-208ENST00000535410 NKX1-1Q15270 411 aaPredicted RBP16.14■□□□□ 0.17
KNTC1-208ENST00000535410 IFNL2Q8IZJ0 200 aa16.14■□□□□ 0.17
KNTC1-208ENST00000535410 NCAPD2Q15021 1401 aa16.13■□□□□ 0.17
KNTC1-208ENST00000535410 CYP27B1O15528 508 aa16.13■□□□□ 0.17
KNTC1-208ENST00000535410 AMOTQ4VCS5 1084 aa16.13■□□□□ 0.17
KNTC1-208ENST00000535410 AMER1Q5JTC6 1135 aaPredicted RBP16.13■□□□□ 0.17
KNTC1-208ENST00000535410 MPRIPQ6WCQ1 1025 aa16.13■□□□□ 0.17
KNTC1-208ENST00000535410 MTFR1LQ9H019 292 aa16.13■□□□□ 0.17
KNTC1-208ENST00000535410 CCNL1Q9UK58 526 aaPredicted RBP16.13■□□□□ 0.17
KNTC1-208ENST00000535410 MAP2P11137 1827 aaKnown RBP16.12■□□□□ 0.17
KNTC1-208ENST00000535410 HSP90AB1P08238 724 aaKnown RBP16.12■□□□□ 0.17
KNTC1-208ENST00000535410 PLEKHO1Q53GL0 409 aaPredicted RBP16.12■□□□□ 0.17
KNTC1-208ENST00000535410 SLC16A10Q8TF71 515 aa16.12■□□□□ 0.17
KNTC1-208ENST00000535410 LRRC4BQ9NT99 713 aa16.12■□□□□ 0.17
KNTC1-208ENST00000535410 TFCP2L1Q9NZI6 479 aa16.12■□□□□ 0.17
KNTC1-208ENST00000535410 RGPD2P0DJD1 1756 aa16.11■□□□□ 0.17
KNTC1-208ENST00000535410 BTAF1O14981 1849 aa16.11■□□□□ 0.17
KNTC1-208ENST00000535410 ZBTB7AO95365 584 aa16.11■□□□□ 0.17
KNTC1-208ENST00000535410 IGSF1Q8N6C5 1336 aa16.11■□□□□ 0.17
KNTC1-208ENST00000535410 ANKRD26Q9UPS8 1709 aa16.11■□□□□ 0.17
KNTC1-208ENST00000535410 PER1O15534 1290 aaPredicted RBP16.1■□□□□ 0.17
KNTC1-208ENST00000535410 AKT1S1Q96B36 256 aa16.1■□□□□ 0.17
KNTC1-208ENST00000535410 PHKG2P15735 406 aa16.09■□□□□ 0.17
KNTC1-208ENST00000535410 TMOD3Q9NYL9 352 aa16.09■□□□□ 0.17
KNTC1-208ENST00000535410 ATF5Q9Y2D1 282 aaPredicted RBP16.09■□□□□ 0.17
KNTC1-208ENST00000535410 MTHFSP49914 203 aa16.07■□□□□ 0.16
KNTC1-208ENST00000535410 ZNF827Q17R98 1081 aa16.07■□□□□ 0.16
KNTC1-208ENST00000535410 C1orf141Q5JVX7 400 aa16.07■□□□□ 0.16
KNTC1-208ENST00000535410 FLAD1Q8NFF5 587 aa16.07■□□□□ 0.16
KNTC1-208ENST00000535410 PIGBQ92521 554 aa16.07■□□□□ 0.16
KNTC1-208ENST00000535410 DCAF5Q96JK2 942 aa16.07■□□□□ 0.16
KNTC1-208ENST00000535410 PDGFDQ9GZP0 370 aaPredicted RBP16.07■□□□□ 0.16
KNTC1-208ENST00000535410 NPC1L1Q9UHC9 1359 aa16.07■□□□□ 0.16
KNTC1-208ENST00000535410 PALLDQ8WX93 1383 aa16.06■□□□□ 0.16
KNTC1-208ENST00000535410 ERVV-2B6SEH9 535 aa16.06■□□□□ 0.16
KNTC1-208ENST00000535410 POLD1P28340 1107 aa16.06■□□□□ 0.16
KNTC1-208ENST00000535410 IL13P35225 146 aa16.06■□□□□ 0.16
KNTC1-208ENST00000535410 CC2D1BQ5T0F9 858 aaKnown RBP16.06■□□□□ 0.16
KNTC1-208ENST00000535410 SULT6B1Q6IMI4 303 aa16.06■□□□□ 0.16
KNTC1-208ENST00000535410 ZNF530Q6P9A1 599 aaPredicted RBP16.05■□□□□ 0.16
KNTC1-208ENST00000535410 DOT1LQ8TEK3 1739 aa16.05■□□□□ 0.16
KNTC1-208ENST00000535410 DIAPH1O60610 1272 aaKnown RBP16.04■□□□□ 0.16
KNTC1-208ENST00000535410 PTGER2P43116 358 aa16.04■□□□□ 0.16
KNTC1-208ENST00000535410 KCNQ4P56696 695 aa16.04■□□□□ 0.16
KNTC1-208ENST00000535410 ARXQ96QS3 562 aa16.04■□□□□ 0.16
KNTC1-208ENST00000535410 SHANK3Q9BYB0 1731 aa16.04■□□□□ 0.16
KNTC1-208ENST00000535410 PKD1L3Q7Z443 1732 aa16.02■□□□□ 0.16
KNTC1-208ENST00000535410 PNPLA7Q6ZV29 1317 aa16.02■□□□□ 0.16
KNTC1-208ENST00000535410 LOC102724428A0A0B4J2F2 783 aa16.02■□□□□ 0.16
KNTC1-208ENST00000535410 SIK1P57059 783 aa16.02■□□□□ 0.16
KNTC1-208ENST00000535410 AK7Q96M32 723 aa16.02■□□□□ 0.16
KNTC1-208ENST00000535410 PAPPAQ13219 1627 aa16.01■□□□□ 0.15
KNTC1-208ENST00000535410 CASZ1Q86V15 1759 aa16.01■□□□□ 0.15
KNTC1-208ENST00000535410 CABP4P57796 275 aa16.01■□□□□ 0.15
KNTC1-208ENST00000535410 CFAP53Q96M91 514 aa16.01■□□□□ 0.15
KNTC1-208ENST00000535410 KDRP35968 1356 aa16■□□□□ 0.15
KNTC1-208ENST00000535410 SGIP1Q9BQI5 828 aa16■□□□□ 0.15
KNTC1-208ENST00000535410 ATP6V1AP38606 617 aa15.99■□□□□ 0.15
KNTC1-208ENST00000535410 AEBP1Q8IUX7 1158 aa15.99■□□□□ 0.15
KNTC1-208ENST00000535410 SYT17Q9BSW7 474 aa15.99■□□□□ 0.15
KNTC1-208ENST00000535410 ASAP1Q9ULH1 1129 aa15.99■□□□□ 0.15
KNTC1-208ENST00000535410 LY75O60449 1722 aa15.99■□□□□ 0.15
KNTC1-208ENST00000535410 CNGB1Q14028 1251 aaPredicted RBP15.98■□□□□ 0.15
KNTC1-208ENST00000535410 AKAP4Q5JQC9 854 aa15.98■□□□□ 0.15
KNTC1-208ENST00000535410 COL23A1Q86Y22 540 aaPredicted RBP15.98■□□□□ 0.15
KNTC1-208ENST00000535410 FHDC1Q9C0D6 1143 aaPredicted RBP15.98■□□□□ 0.15
KNTC1-208ENST00000535410 ATG3Q9NT62 314 aa15.98■□□□□ 0.15
KNTC1-208ENST00000535410 NUDCQ9Y266 331 aa15.97■□□□□ 0.15
KNTC1-208ENST00000535410 SSFA2P28290 1259 aa15.96■□□□□ 0.15
KNTC1-208ENST00000535410 U2SURPO15042 1029 aaKnown RBP15.95■□□□□ 0.14
KNTC1-208ENST00000535410 HMOX1P09601 288 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms