RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 PANK3Q9H999 370 aa13□□□□□ -0.33
CDCA3-204ENST00000535406 SRCAPQ6ZRS2 3230 aa13□□□□□ -0.33
CDCA3-204ENST00000535406 NHSQ6T4R5 1651 aa12.99□□□□□ -0.33
CDCA3-204ENST00000535406 NSD2O96028 1365 aa12.98□□□□□ -0.33
CDCA3-204ENST00000535406 KIF7Q2M1P5 1343 aa12.98□□□□□ -0.33
CDCA3-204ENST00000535406 MAP2P11137 1827 aaKnown RBP12.98□□□□□ -0.33
CDCA3-204ENST00000535406 HSP90AB2PQ58FF8 381 aa12.98□□□□□ -0.33
CDCA3-204ENST00000535406 BCL11BQ9C0K0 894 aaPredicted RBP12.98□□□□□ -0.33
CDCA3-204ENST00000535406 EMILIN1Q9Y6C2 1016 aa12.98□□□□□ -0.33
CDCA3-204ENST00000535406 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
CDCA3-204ENST00000535406 MEGF6O75095 1541 aa12.98□□□□□ -0.33
CDCA3-204ENST00000535406 PPM1GO15355 546 aaPredicted RBP12.97□□□□□ -0.33
CDCA3-204ENST00000535406 SHANK3Q9BYB0 1731 aa12.97□□□□□ -0.33
CDCA3-204ENST00000535406 PSDA5PKW4 1024 aaPredicted RBP12.96□□□□□ -0.33
CDCA3-204ENST00000535406 NBPF6Q5VWK0 638 aa12.96□□□□□ -0.33
CDCA3-204ENST00000535406 NBPF4Q96M43 638 aa12.96□□□□□ -0.33
CDCA3-204ENST00000535406 TNNT2P45379 298 aaPredicted RBP12.95□□□□□ -0.34
CDCA3-204ENST00000535406 PTF1AQ7RTS3 328 aa12.95□□□□□ -0.34
CDCA3-204ENST00000535406 USHBP1Q8N6Y0 703 aa12.95□□□□□ -0.34
CDCA3-204ENST00000535406 PLSCR1O15162 318 aa12.94□□□□□ -0.34
CDCA3-204ENST00000535406 R3HDM1Q15032 1099 aaKnown RBP12.94□□□□□ -0.34
CDCA3-204ENST00000535406 RAPGEF4Q8WZA2 1011 aa12.94□□□□□ -0.34
CDCA3-204ENST00000535406 ACSBG1Q96GR2 724 aa12.94□□□□□ -0.34
CDCA3-204ENST00000535406 KNSTRNQ9Y448 316 aa12.94□□□□□ -0.34
CDCA3-204ENST00000535406 WASHC2AQ641Q2 1341 aa12.94□□□□□ -0.34
CDCA3-204ENST00000535406 BTAF1O14981 1849 aa12.93□□□□□ -0.34
CDCA3-204ENST00000535406 LRP5O75197 1615 aa12.93□□□□□ -0.34
CDCA3-204ENST00000535406 DDX54Q8TDD1 881 aaKnown RBP12.93□□□□□ -0.34
CDCA3-204ENST00000535406 POLKQ9UBT6 870 aa12.93□□□□□ -0.34
CDCA3-204ENST00000535406 DOT1LQ8TEK3 1739 aa12.93□□□□□ -0.34
CDCA3-204ENST00000535406 KCNQ2O43526 872 aa12.92□□□□□ -0.34
CDCA3-204ENST00000535406 TATP17735 454 aaPredicted RBP12.92□□□□□ -0.34
CDCA3-204ENST00000535406 NCAPD2Q15021 1401 aa12.92□□□□□ -0.34
CDCA3-204ENST00000535406 NBPF14Q5TI25 921 aa12.92□□□□□ -0.34
CDCA3-204ENST00000535406 ZCRB1Q8TBF4 217 aaKnown RBP12.92□□□□□ -0.34
CDCA3-204ENST00000535406 MORC1Q86VD1 984 aa12.91□□□□□ -0.34
CDCA3-204ENST00000535406 KAT6BQ8WYB5 2073 aa12.91□□□□□ -0.34
CDCA3-204ENST00000535406 PKD1L3Q7Z443 1732 aa12.91□□□□□ -0.34
CDCA3-204ENST00000535406 PCDH11XQ9BZA7 1347 aa12.9□□□□□ -0.34
CDCA3-204ENST00000535406 PCDH11YQ9BZA8 1340 aa12.9□□□□□ -0.34
CDCA3-204ENST00000535406 EIF4A2Q14240 407 aaKnown RBP12.88□□□□□ -0.35
CDCA3-204ENST00000535406 TXNRD1Q16881 649 aa12.88□□□□□ -0.35
CDCA3-204ENST00000535406 SYTL4Q96C24 671 aaPredicted RBP12.88□□□□□ -0.35
CDCA3-204ENST00000535406 PROM2Q8N271 834 aa12.88□□□□□ -0.35
CDCA3-204ENST00000535406 EYA1Q99502 592 aa12.88□□□□□ -0.35
CDCA3-204ENST00000535406 ANO8Q9HCE9 1232 aaPredicted RBP12.88□□□□□ -0.35
CDCA3-204ENST00000535406 PAPPAQ13219 1627 aa12.86□□□□□ -0.35
CDCA3-204ENST00000535406 PER1O15534 1290 aaPredicted RBP12.86□□□□□ -0.35
CDCA3-204ENST00000535406 PRIM1P49642 420 aaKnown RBP12.86□□□□□ -0.35
CDCA3-204ENST00000535406 IGSF1Q8N6C5 1336 aa12.85□□□□□ -0.35
CDCA3-204ENST00000535406 TOGARAM1Q9Y4F4 1720 aa12.85□□□□□ -0.35
CDCA3-204ENST00000535406 PLEKHG2Q9H7P9 1386 aa12.85□□□□□ -0.35
CDCA3-204ENST00000535406 STK32BQ9NY57 414 aa12.85□□□□□ -0.35
CDCA3-204ENST00000535406 SPG7Q9UQ90 795 aa12.85□□□□□ -0.35
CDCA3-204ENST00000535406 CASZ1Q86V15 1759 aa12.84□□□□□ -0.35
CDCA3-204ENST00000535406 LY75O60449 1722 aa12.84□□□□□ -0.35
CDCA3-204ENST00000535406 CYP27B1O15528 508 aa12.84□□□□□ -0.35
CDCA3-204ENST00000535406 CC2D1BQ5T0F9 858 aaKnown RBP12.84□□□□□ -0.35
CDCA3-204ENST00000535406 NPC1L1Q9UHC9 1359 aa12.83□□□□□ -0.36
CDCA3-204ENST00000535406 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDCA3-204ENST00000535406 SLC15A2Q16348 729 aa12.82□□□□□ -0.36
CDCA3-204ENST00000535406 SLC27A3Q5K4L6 730 aa12.82□□□□□ -0.36
CDCA3-204ENST00000535406 ITGB4P16144 1822 aa12.81□□□□□ -0.36
CDCA3-204ENST00000535406 LRRC4BQ9NT99 713 aa12.81□□□□□ -0.36
CDCA3-204ENST00000535406 ZNF219Q9P2Y4 722 aaPredicted RBP12.81□□□□□ -0.36
CDCA3-204ENST00000535406 MTHFSP49914 203 aa12.8□□□□□ -0.36
CDCA3-204ENST00000535406 CNGB1Q14028 1251 aaPredicted RBP12.8□□□□□ -0.36
CDCA3-204ENST00000535406 NKX1-1Q15270 411 aaPredicted RBP12.8□□□□□ -0.36
CDCA3-204ENST00000535406 MPRIPQ6WCQ1 1025 aa12.8□□□□□ -0.36
CDCA3-204ENST00000535406 IFNL2Q8IZJ0 200 aa12.8□□□□□ -0.36
CDCA3-204ENST00000535406 PHKG2P15735 406 aa12.79□□□□□ -0.36
CDCA3-204ENST00000535406 IL13P35225 146 aa12.79□□□□□ -0.36
CDCA3-204ENST00000535406 SPON1Q9HCB6 807 aa12.79□□□□□ -0.36
CDCA3-204ENST00000535406 CCNL1Q9UK58 526 aaPredicted RBP12.79□□□□□ -0.36
CDCA3-204ENST00000535406 KDRP35968 1356 aa12.79□□□□□ -0.36
CDCA3-204ENST00000535406 PALLDQ8WX93 1383 aa12.79□□□□□ -0.36
CDCA3-204ENST00000535406 QSER1Q2KHR3 1735 aa12.78□□□□□ -0.36
CDCA3-204ENST00000535406 ZNF827Q17R98 1081 aa12.78□□□□□ -0.36
CDCA3-204ENST00000535406 SULT6B1Q6IMI4 303 aa12.78□□□□□ -0.36
CDCA3-204ENST00000535406 AEBP1Q8IUX7 1158 aa12.78□□□□□ -0.36
CDCA3-204ENST00000535406 C5P01031 1676 aa12.77□□□□□ -0.36
CDCA3-204ENST00000535406 KCNQ4P56696 695 aa12.77□□□□□ -0.37
CDCA3-204ENST00000535406 AMOTQ4VCS5 1084 aa12.77□□□□□ -0.37
CDCA3-204ENST00000535406 PLEKHO1Q53GL0 409 aaPredicted RBP12.77□□□□□ -0.37
CDCA3-204ENST00000535406 PDGFDQ9GZP0 370 aaPredicted RBP12.77□□□□□ -0.37
CDCA3-204ENST00000535406 TUBGCP6Q96RT7 1819 aa12.77□□□□□ -0.37
CDCA3-204ENST00000535406 ZBTB7AO95365 584 aa12.76□□□□□ -0.37
CDCA3-204ENST00000535406 COL3A1P02461 1466 aaPredicted RBP12.76□□□□□ -0.37
CDCA3-204ENST00000535406 ZNF530Q6P9A1 599 aaPredicted RBP12.76□□□□□ -0.37
CDCA3-204ENST00000535406 SMARCC1Q92922 1105 aaPredicted RBP12.76□□□□□ -0.37
CDCA3-204ENST00000535406 TMOD3Q9NYL9 352 aa12.76□□□□□ -0.37
CDCA3-204ENST00000535406 PPP1R1BQ9UD71 204 aaPredicted RBP12.76□□□□□ -0.37
CDCA3-204ENST00000535406 DIAPH1O60610 1272 aaKnown RBP12.75□□□□□ -0.37
CDCA3-204ENST00000535406 HSP90AB1P08238 724 aaKnown RBP12.75□□□□□ -0.37
CDCA3-204ENST00000535406 PIGBQ92521 554 aa12.75□□□□□ -0.37
CDCA3-204ENST00000535406 AKT1S1Q96B36 256 aa12.75□□□□□ -0.37
CDCA3-204ENST00000535406 TAF1LQ8IZX4 1826 aa12.75□□□□□ -0.37
CDCA3-204ENST00000535406 KDM6AO15550 1401 aaPredicted RBP12.74□□□□□ -0.37
CDCA3-204ENST00000535406 C1orf141Q5JVX7 400 aa12.74□□□□□ -0.37
CDCA3-204ENST00000535406 DCAF5Q96JK2 942 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms