RNA–Protein interactions for RNA: ENST00000535190.1

NPIPB3-207, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-207ENST00000535190 INSRP06213 1382 aa11.13□□□□□ -0.63
NPIPB3-207ENST00000535190 PTGER2P43116 358 aa11.12□□□□□ -0.63
NPIPB3-207ENST00000535190 SGIP1Q9BQI5 828 aa11.12□□□□□ -0.63
NPIPB3-207ENST00000535190 MEGF6O75095 1541 aa11.12□□□□□ -0.63
NPIPB3-207ENST00000535190 KIF24Q5T7B8 1368 aa11.12□□□□□ -0.63
NPIPB3-207ENST00000535190 PAPPAQ13219 1627 aa11.11□□□□□ -0.63
NPIPB3-207ENST00000535190 PRIM1P49642 420 aaKnown RBP11.11□□□□□ -0.63
NPIPB3-207ENST00000535190 EMILIN1Q9Y6C2 1016 aa11.11□□□□□ -0.63
NPIPB3-207ENST00000535190 NSD2O96028 1365 aa11.11□□□□□ -0.63
NPIPB3-207ENST00000535190 NSD3Q9BZ95 1437 aa11.1□□□□□ -0.63
NPIPB3-207ENST00000535190 KIF20BQ96Q89 1820 aa11.1□□□□□ -0.63
NPIPB3-207ENST00000535190 HSPA5P11021 654 aaKnown RBP11.1□□□□□ -0.63
NPIPB3-207ENST00000535190 USHBP1Q8N6Y0 703 aa11.1□□□□□ -0.63
NPIPB3-207ENST00000535190 AKT1S1Q96B36 256 aa11.1□□□□□ -0.63
NPIPB3-207ENST00000535190 NCAPD2Q15021 1401 aa11.09□□□□□ -0.63
NPIPB3-207ENST00000535190 MAP2P11137 1827 aaKnown RBP11.09□□□□□ -0.63
NPIPB3-207ENST00000535190 FLT4P35916 1363 aa11.09□□□□□ -0.63
NPIPB3-207ENST00000535190 ZBTB7AO95365 584 aa11.09□□□□□ -0.63
NPIPB3-207ENST00000535190 ZNF827Q17R98 1081 aa11.09□□□□□ -0.63
NPIPB3-207ENST00000535190 STK32BQ9NY57 414 aa11.09□□□□□ -0.63
NPIPB3-207ENST00000535190 POLKQ9UBT6 870 aa11.09□□□□□ -0.63
NPIPB3-207ENST00000535190 CGNL1Q0VF96 1302 aa11.09□□□□□ -0.63
NPIPB3-207ENST00000535190 WASHC2AQ641Q2 1341 aa11.09□□□□□ -0.63
NPIPB3-207ENST00000535190 EIF4G2P78344 907 aaKnown RBP eCLIP11.08□□□□□ -0.64
NPIPB3-207ENST00000535190 ATF5Q9Y2D1 282 aaPredicted RBP11.08□□□□□ -0.64
NPIPB3-207ENST00000535190 CYP27B1O15528 508 aa11.07□□□□□ -0.64
NPIPB3-207ENST00000535190 KCNQ4P56696 695 aa11.07□□□□□ -0.64
NPIPB3-207ENST00000535190 SLC27A3Q5K4L6 730 aa11.07□□□□□ -0.64
NPIPB3-207ENST00000535190 LY75O60449 1722 aa11.06□□□□□ -0.64
NPIPB3-207ENST00000535190 ANKRD26Q9UPS8 1709 aa11.06□□□□□ -0.64
NPIPB3-207ENST00000535190 TATP17735 454 aaPredicted RBP11.06□□□□□ -0.64
NPIPB3-207ENST00000535190 NKX1-1Q15270 411 aaPredicted RBP11.06□□□□□ -0.64
NPIPB3-207ENST00000535190 RAPGEF4Q8WZA2 1011 aa11.06□□□□□ -0.64
NPIPB3-207ENST00000535190 EYA1Q99502 592 aa11.06□□□□□ -0.64
NPIPB3-207ENST00000535190 MTFR1LQ9H019 292 aa11.06□□□□□ -0.64
NPIPB3-207ENST00000535190 PANK3Q9H999 370 aa11.06□□□□□ -0.64
NPIPB3-207ENST00000535190 DOT1LQ8TEK3 1739 aa11.05□□□□□ -0.64
NPIPB3-207ENST00000535190 PPP1R1BQ9UD71 204 aaPredicted RBP11.04□□□□□ -0.64
NPIPB3-207ENST00000535190 COL24A1Q17RW2 1714 aa11.04□□□□□ -0.64
NPIPB3-207ENST00000535190 QSER1Q2KHR3 1735 aa11.04□□□□□ -0.64
NPIPB3-207ENST00000535190 SMG6Q86US8 1419 aaKnown RBP11.03□□□□□ -0.64
NPIPB3-207ENST00000535190 EIF4A2Q14240 407 aaKnown RBP11.03□□□□□ -0.64
NPIPB3-207ENST00000535190 SLC16A10Q8TF71 515 aa11.03□□□□□ -0.64
NPIPB3-207ENST00000535190 SYTL4Q96C24 671 aaPredicted RBP11.03□□□□□ -0.64
NPIPB3-207ENST00000535190 SYT17Q9BSW7 474 aa11.03□□□□□ -0.64
NPIPB3-207ENST00000535190 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.03□□□□□ -0.64
NPIPB3-207ENST00000535190 PNPLA7Q6ZV29 1317 aa11.03□□□□□ -0.64
NPIPB3-207ENST00000535190 PKD1L3Q7Z443 1732 aa11.02□□□□□ -0.65
NPIPB3-207ENST00000535190 PPM1GO15355 546 aaPredicted RBP11.02□□□□□ -0.65
NPIPB3-207ENST00000535190 POLR3GLQ9BT43 218 aa11.02□□□□□ -0.65
NPIPB3-207ENST00000535190 PCDH11XQ9BZA7 1347 aa11.02□□□□□ -0.65
NPIPB3-207ENST00000535190 PCDH11YQ9BZA8 1340 aa11.02□□□□□ -0.65
NPIPB3-207ENST00000535190 TUBGCP6Q96RT7 1819 aa11.02□□□□□ -0.65
NPIPB3-207ENST00000535190 ITGB4P16144 1822 aa11.01□□□□□ -0.65
NPIPB3-207ENST00000535190 PIGBQ92521 554 aa11.01□□□□□ -0.65
NPIPB3-207ENST00000535190 FHDC1Q9C0D6 1143 aaPredicted RBP11.01□□□□□ -0.65
NPIPB3-207ENST00000535190 TOGARAM1Q9Y4F4 1720 aa11.01□□□□□ -0.65
NPIPB3-207ENST00000535190 COL23A1Q86Y22 540 aaPredicted RBP11□□□□□ -0.65
NPIPB3-207ENST00000535190 ARXQ96QS3 562 aa11□□□□□ -0.65
NPIPB3-207ENST00000535190 CCNL1Q9UK58 526 aaPredicted RBP11□□□□□ -0.65
NPIPB3-207ENST00000535190 MAP3K5Q99683 1374 aa11□□□□□ -0.65
NPIPB3-207ENST00000535190 PER1O15534 1290 aaPredicted RBP10.99□□□□□ -0.65
NPIPB3-207ENST00000535190 PHKG2P15735 406 aa10.99□□□□□ -0.65
NPIPB3-207ENST00000535190 TNNT2P45379 298 aaPredicted RBP10.99□□□□□ -0.65
NPIPB3-207ENST00000535190 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
NPIPB3-207ENST00000535190 MPRIPQ6WCQ1 1025 aa10.99□□□□□ -0.65
NPIPB3-207ENST00000535190 IGSF1Q8N6C5 1336 aa10.99□□□□□ -0.65
NPIPB3-207ENST00000535190 TAF1LQ8IZX4 1826 aa10.98□□□□□ -0.65
NPIPB3-207ENST00000535190 AMIGO3Q86WK7 504 aa10.98□□□□□ -0.65
NPIPB3-207ENST00000535190 TFCP2L1Q9NZI6 479 aa10.98□□□□□ -0.65
NPIPB3-207ENST00000535190 SPG7Q9UQ90 795 aa10.98□□□□□ -0.65
NPIPB3-207ENST00000535190 IFNL2Q8IZJ0 200 aa10.97□□□□□ -0.65
NPIPB3-207ENST00000535190 KIF7Q2M1P5 1343 aa10.97□□□□□ -0.65
NPIPB3-207ENST00000535190 PALLDQ8WX93 1383 aa10.97□□□□□ -0.65
NPIPB3-207ENST00000535190 PLEKHG2Q9H7P9 1386 aa10.97□□□□□ -0.65
NPIPB3-207ENST00000535190 YY1P25490 414 aa10.96□□□□□ -0.65
NPIPB3-207ENST00000535190 CNKSR2Q8WXI2 1034 aa10.96□□□□□ -0.65
NPIPB3-207ENST00000535190 SMARCC1Q92922 1105 aaPredicted RBP10.96□□□□□ -0.65
NPIPB3-207ENST00000535190 ASAP1Q9ULH1 1129 aa10.96□□□□□ -0.65
NPIPB3-207ENST00000535190 IL13P35225 146 aa10.95□□□□□ -0.66
NPIPB3-207ENST00000535190 SMIM5Q71RC9 77 aa10.95□□□□□ -0.66
NPIPB3-207ENST00000535190 MORC1Q86VD1 984 aa10.95□□□□□ -0.66
NPIPB3-207ENST00000535190 SLC4A9Q96Q91 983 aa10.95□□□□□ -0.66
NPIPB3-207ENST00000535190 ATG3Q9NT62 314 aa10.95□□□□□ -0.66
NPIPB3-207ENST00000535190 LOC102724428A0A0B4J2F2 783 aa10.94□□□□□ -0.66
NPIPB3-207ENST00000535190 SIK1P57059 783 aa10.94□□□□□ -0.66
NPIPB3-207ENST00000535190 ITPK1Q13572 414 aa10.94□□□□□ -0.66
NPIPB3-207ENST00000535190 AEBP1Q8IUX7 1158 aa10.94□□□□□ -0.66
NPIPB3-207ENST00000535190 KNSTRNQ9Y448 316 aa10.94□□□□□ -0.66
NPIPB3-207ENST00000535190 C5P01031 1676 aa10.94□□□□□ -0.66
NPIPB3-207ENST00000535190 ERVV-2B6SEH9 535 aa10.93□□□□□ -0.66
NPIPB3-207ENST00000535190 LINC00116Q8NCU8 138 aa10.93□□□□□ -0.66
NPIPB3-207ENST00000535190 UBR3Q6ZT12 1888 aa10.93□□□□□ -0.66
NPIPB3-207ENST00000535190 C4BP0C0L5 1744 aa10.92□□□□□ -0.66
NPIPB3-207ENST00000535190 KDRP35968 1356 aa10.92□□□□□ -0.66
NPIPB3-207ENST00000535190 DCAF8L1A6NGE4 600 aa10.92□□□□□ -0.66
NPIPB3-207ENST00000535190 HMGB2P26583 209 aaKnown RBP10.92□□□□□ -0.66
NPIPB3-207ENST00000535190 POLD1P28340 1107 aa10.92□□□□□ -0.66
NPIPB3-207ENST00000535190 PLEKHO1Q53GL0 409 aaPredicted RBP10.92□□□□□ -0.66
NPIPB3-207ENST00000535190 FLAD1Q8NFF5 587 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms