RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 SMC3Q9UQE7 1217 aa10.5□□□□□ -0.73
CTNND1-237ENST00000534579 DMRT2Q9Y5R5 561 aa10.5□□□□□ -0.73
CTNND1-237ENST00000534579 PLCD3Q8N3E9 789 aa10.5□□□□□ -0.73
CTNND1-237ENST00000534579 KIAA0556O60303 1618 aa10.5□□□□□ -0.73
CTNND1-237ENST00000534579 TTLL12Q14166 644 aaPredicted RBP10.5□□□□□ -0.73
CTNND1-237ENST00000534579 CDC45O75419 566 aa10.5□□□□□ -0.73
CTNND1-237ENST00000534579 STK11IPQ8N1F8 1099 aa10.5□□□□□ -0.73
CTNND1-237ENST00000534579 A2MP01023 1474 aa10.49□□□□□ -0.73
CTNND1-237ENST00000534579 ZNF518AQ6AHZ1 1483 aa10.49□□□□□ -0.73
CTNND1-237ENST00000534579 ERC1Q8IUD2 1116 aa10.49□□□□□ -0.73
CTNND1-237ENST00000534579 BCL11BQ9C0K0 894 aaPredicted RBP10.49□□□□□ -0.73
CTNND1-237ENST00000534579 TXLNAP40222 546 aa10.49□□□□□ -0.73
CTNND1-237ENST00000534579 ATP2B1P20020 1258 aa10.49□□□□□ -0.73
CTNND1-237ENST00000534579 TMPOP42166 694 aaKnown RBP10.49□□□□□ -0.73
CTNND1-237ENST00000534579 TTC39AQ5SRH9 613 aa10.49□□□□□ -0.73
CTNND1-237ENST00000534579 SIL1Q9H173 461 aa10.49□□□□□ -0.73
CTNND1-237ENST00000534579 C14orf93Q9H972 538 aaKnown RBP10.49□□□□□ -0.73
CTNND1-237ENST00000534579 CHMP5Q9NZZ3 219 aa10.49□□□□□ -0.73
CTNND1-237ENST00000534579 UGGT2Q9NYU1 1516 aa10.48□□□□□ -0.73
CTNND1-237ENST00000534579 SCAF11Q99590 1463 aaKnown RBP10.48□□□□□ -0.73
CTNND1-237ENST00000534579 DUOX2Q9NRD8 1548 aa10.48□□□□□ -0.73
CTNND1-237ENST00000534579 CT47B1P0C2W7 299 aaPredicted RBP10.48□□□□□ -0.73
CTNND1-237ENST00000534579 PDE3AQ14432 1141 aa10.48□□□□□ -0.73
CTNND1-237ENST00000534579 KRT28Q7Z3Y7 464 aa10.48□□□□□ -0.73
CTNND1-237ENST00000534579 EMILIN1Q9Y6C2 1016 aa10.48□□□□□ -0.73
CTNND1-237ENST00000534579 ENOX2Q16206 610 aaKnown RBP10.48□□□□□ -0.73
CTNND1-237ENST00000534579 CCDC184Q52MB2 194 aa10.48□□□□□ -0.73
CTNND1-237ENST00000534579 HSP90B2PQ58FF3 399 aa10.48□□□□□ -0.73
CTNND1-237ENST00000534579 MCM10Q7L590 875 aa10.48□□□□□ -0.73
CTNND1-237ENST00000534579 MIS18AQ9NYP9 233 aa10.48□□□□□ -0.73
CTNND1-237ENST00000534579 SKOR2Q2VWA4 1001 aaPredicted RBP10.48□□□□□ -0.73
CTNND1-237ENST00000534579 CCDC158Q5M9N0 1113 aa10.48□□□□□ -0.73
CTNND1-237ENST00000534579 LRPPRCP42704 1394 aaKnown RBP10.47□□□□□ -0.73
CTNND1-237ENST00000534579 CA8P35219 290 aa10.47□□□□□ -0.73
CTNND1-237ENST00000534579 SEPT11Q9NVA2 429 aaKnown RBP10.47□□□□□ -0.73
CTNND1-237ENST00000534579 PTCD1O75127 700 aaKnown RBP10.47□□□□□ -0.73
CTNND1-237ENST00000534579 ERLIN2O94905 339 aa10.47□□□□□ -0.73
CTNND1-237ENST00000534579 THUMPD2Q9BTF0 503 aaKnown RBP10.47□□□□□ -0.73
CTNND1-237ENST00000534579 ARGLU1Q9NWB6 273 aaPredicted RBP10.47□□□□□ -0.73
CTNND1-237ENST00000534579 TMOD3Q9NYL9 352 aa10.47□□□□□ -0.73
CTNND1-237ENST00000534579 BRPF1P55201 1214 aaPredicted RBP10.47□□□□□ -0.73
CTNND1-237ENST00000534579 RPRD2Q5VT52 1461 aaKnown RBP10.47□□□□□ -0.73
CTNND1-237ENST00000534579 ATF7IPQ6VMQ6 1270 aa10.47□□□□□ -0.73
CTNND1-237ENST00000534579 BICDL1Q6ZP65 573 aa10.47□□□□□ -0.73
CTNND1-237ENST00000534579 C22orf23Q9BZE7 217 aa10.47□□□□□ -0.73
CTNND1-237ENST00000534579 DNAI2Q9GZS0 605 aa10.47□□□□□ -0.73
CTNND1-237ENST00000534579 PRKCSHP14314 528 aaPredicted RBP10.46□□□□□ -0.73
CTNND1-237ENST00000534579 CCDC57Q2TAC2 916 aa10.46□□□□□ -0.73
CTNND1-237ENST00000534579 MPHOSPH8Q99549 860 aa10.46□□□□□ -0.73
CTNND1-237ENST00000534579 STARD3NLO95772 234 aa10.46□□□□□ -0.73
CTNND1-237ENST00000534579 GCC1Q96CN9 775 aa10.46□□□□□ -0.73
CTNND1-237ENST00000534579 NAT10Q9H0A0 1025 aaKnown RBP10.46□□□□□ -0.73
CTNND1-237ENST00000534579 ZNF76P36508 570 aa10.46□□□□□ -0.73
CTNND1-237ENST00000534579 NOM1Q5C9Z4 860 aaKnown RBP10.46□□□□□ -0.73
CTNND1-237ENST00000534579 NGLY1Q96IV0 654 aa10.46□□□□□ -0.73
CTNND1-237ENST00000534579 TANGO6Q9C0B7 1094 aa10.46□□□□□ -0.73
CTNND1-237ENST00000534579 PDZRN3Q9UPQ7 1066 aa10.46□□□□□ -0.74
CTNND1-237ENST00000534579 UHRF1BP1LA0JNW5 1464 aa10.46□□□□□ -0.74
CTNND1-237ENST00000534579 SMARCE1Q969G3 411 aa10.46□□□□□ -0.74
CTNND1-237ENST00000534579 IFT57Q9NWB7 429 aa10.46□□□□□ -0.74
CTNND1-237ENST00000534579 TRAPPC8Q9Y2L5 1435 aa10.46□□□□□ -0.74
CTNND1-237ENST00000534579 CADPS2Q86UW7 1296 aa10.45□□□□□ -0.74
CTNND1-237ENST00000534579 C11orf95C9JLR9 678 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-237ENST00000534579 EZRP15311 586 aaKnown RBP10.45□□□□□ -0.74
CTNND1-237ENST00000534579 HMGN5P82970 282 aaKnown RBP10.45□□□□□ -0.74
CTNND1-237ENST00000534579 AMOTQ4VCS5 1084 aa10.45□□□□□ -0.74
CTNND1-237ENST00000534579 SOGA3Q5TF21 947 aa10.45□□□□□ -0.74
CTNND1-237ENST00000534579 H0YHG0 523 aa10.45□□□□□ -0.74
CTNND1-237ENST00000534579 FILIP1LQ4L180 1135 aa10.45□□□□□ -0.74
CTNND1-237ENST00000534579 DRC1Q96MC2 740 aa10.45□□□□□ -0.74
CTNND1-237ENST00000534579 LRRCC1Q9C099 1032 aa10.45□□□□□ -0.74
CTNND1-237ENST00000534579 HIP1O00291 1037 aa10.44□□□□□ -0.74
CTNND1-237ENST00000534579 PSMA5P28066 241 aa10.44□□□□□ -0.74
CTNND1-237ENST00000534579 ERCC4Q92889 916 aaPredicted RBP10.44□□□□□ -0.74
CTNND1-237ENST00000534579 WDR62O43379 1518 aa10.44□□□□□ -0.74
CTNND1-237ENST00000534579 ACEP12821 1306 aa10.44□□□□□ -0.74
CTNND1-237ENST00000534579 DUSP27Q5VZP5 1158 aa10.44□□□□□ -0.74
CTNND1-237ENST00000534579 GBP2P32456 591 aaPredicted RBP10.44□□□□□ -0.74
CTNND1-237ENST00000534579 MVPQ14764 893 aaKnown RBP10.44□□□□□ -0.74
CTNND1-237ENST00000534579 MPRIPQ6WCQ1 1025 aa10.44□□□□□ -0.74
CTNND1-237ENST00000534579 MSH6P52701 1360 aa10.44□□□□□ -0.74
CTNND1-237ENST00000534579 TMOD2Q9NZR1 351 aa10.43□□□□□ -0.74
CTNND1-237ENST00000534579 SRGAP3O43295 1099 aa10.43□□□□□ -0.74
CTNND1-237ENST00000534579 SSR1P43307 286 aaKnown RBP10.43□□□□□ -0.74
CTNND1-237ENST00000534579 CCDC85AQ96PX6 553 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-237ENST00000534579 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.43□□□□□ -0.741e-7■■■□□ 16.3
CTNND1-237ENST00000534579 WDR78Q5VTH9 848 aa10.43□□□□□ -0.74
CTNND1-237ENST00000534579 ABCC10Q5T3U5 1492 aa10.42□□□□□ -0.74
CTNND1-237ENST00000534579 TAF7Q15545 349 aaPredicted RBP10.42□□□□□ -0.74
CTNND1-237ENST00000534579 SMC2O95347 1197 aa10.42□□□□□ -0.74
CTNND1-237ENST00000534579 RIMS2Q9UQ26 1411 aa10.42□□□□□ -0.74
CTNND1-237ENST00000534579 PBRM1Q86U86 1689 aa10.42□□□□□ -0.74
CTNND1-237ENST00000534579 PPP4R3AQ6IN85 833 aa10.42□□□□□ -0.74
CTNND1-237ENST00000534579 SDF4Q9BRK5 362 aa10.42□□□□□ -0.74
CTNND1-237ENST00000534579 GRIPAP1Q4V328 841 aa10.42□□□□□ -0.74
CTNND1-237ENST00000534579 DEF6Q9H4E7 631 aa10.42□□□□□ -0.74
CTNND1-237ENST00000534579 DISP3Q9P2K9 1392 aa10.42□□□□□ -0.74
CTNND1-237ENST00000534579 PTPRKQ15262 1439 aa10.41□□□□□ -0.74
CTNND1-237ENST00000534579 SLFN5Q08AF3 891 aa10.41□□□□□ -0.74
CTNND1-237ENST00000534579 ABCC2Q92887 1545 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms