RNA–Protein interactions for RNA: ENST00000534446.1

LONRF1-209, Transcript of LON peptidase N-terminal domain and ring finger 1, humanhuman

TSL 3

Gene LONRF1, Length 679 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF1-209ENST00000534446 RGPD2P0DJD1 1756 aa13.37□□□□□ -0.27
LONRF1-209ENST00000534446 SULT6B1Q6IMI4 303 aa13.35□□□□□ -0.27
LONRF1-209ENST00000534446 CCDC125Q86Z20 511 aa13.35□□□□□ -0.27
LONRF1-209ENST00000534446 PRKRIP1Q9H875 184 aaPredicted RBP13.35□□□□□ -0.27
LONRF1-209ENST00000534446 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.35□□□□□ -0.273e-6■□□□□ 11.1
LONRF1-209ENST00000534446 RGPD1P0DJD0 1748 aa13.34□□□□□ -0.27
LONRF1-209ENST00000534446 CFAP53Q96M91 514 aa13.34□□□□□ -0.27
LONRF1-209ENST00000534446 MYBBP1AQ9BQG0 1328 aaKnown RBP13.34□□□□□ -0.27
LONRF1-209ENST00000534446 CYP27B1O15528 508 aa13.33□□□□□ -0.28
LONRF1-209ENST00000534446 TRIM37O94972 964 aa13.33□□□□□ -0.28
LONRF1-209ENST00000534446 DDX54Q8TDD1 881 aaKnown RBP13.33□□□□□ -0.28
LONRF1-209ENST00000534446 PCDH11XQ9BZA7 1347 aa13.33□□□□□ -0.28
LONRF1-209ENST00000534446 PCDH11YQ9BZA8 1340 aa13.33□□□□□ -0.28
LONRF1-209ENST00000534446 PTF1AQ7RTS3 328 aa13.32□□□□□ -0.28
LONRF1-209ENST00000534446 HMOX1P09601 288 aa13.31□□□□□ -0.28
LONRF1-209ENST00000534446 SPG7Q9UQ90 795 aa13.31□□□□□ -0.28
LONRF1-209ENST00000534446 U2SURPO15042 1029 aaKnown RBP13.3□□□□□ -0.28
LONRF1-209ENST00000534446 PHKG2P15735 406 aa13.3□□□□□ -0.28
LONRF1-209ENST00000534446 NKX1-1Q15270 411 aaPredicted RBP13.3□□□□□ -0.28
LONRF1-209ENST00000534446 AMOTQ4VCS5 1084 aa13.3□□□□□ -0.28
LONRF1-209ENST00000534446 DEFB132Q7Z7B7 95 aa13.3□□□□□ -0.28
LONRF1-209ENST00000534446 BCL11BQ9C0K0 894 aaPredicted RBP13.3□□□□□ -0.28
LONRF1-209ENST00000534446 SHANK3Q9BYB0 1731 aa13.3□□□□□ -0.28
LONRF1-209ENST00000534446 KCNQ2O43526 872 aa13.29□□□□□ -0.28
LONRF1-209ENST00000534446 SF3B2Q13435 895 aaKnown RBP13.29□□□□□ -0.28
LONRF1-209ENST00000534446 PLEKHO1Q53GL0 409 aaPredicted RBP13.29□□□□□ -0.28
LONRF1-209ENST00000534446 ACSBG1Q96GR2 724 aa13.29□□□□□ -0.28
LONRF1-209ENST00000534446 RSPH6AQ9H0K4 717 aa13.29□□□□□ -0.28
LONRF1-209ENST00000534446 NUDCQ9Y266 331 aa13.29□□□□□ -0.28
LONRF1-209ENST00000534446 PKD1L3Q7Z443 1732 aa13.29□□□□□ -0.28
LONRF1-209ENST00000534446 IFNL2Q8IZJ0 200 aa13.28□□□□□ -0.28
LONRF1-209ENST00000534446 APBA3O96018 575 aa13.27□□□□□ -0.29
LONRF1-209ENST00000534446 BAG6P46379 1132 aa13.27□□□□□ -0.29
LONRF1-209ENST00000534446 CAMKK2Q96RR4 588 aa13.27□□□□□ -0.29
LONRF1-209ENST00000534446 U2AF1L5P0DN76 240 aaPredicted RBP13.26□□□□□ -0.29
LONRF1-209ENST00000534446 U2AF1Q01081 240 aaKnown RBP eCLIP13.26□□□□□ -0.29
LONRF1-209ENST00000534446 EN1Q05925 392 aaPredicted RBP13.26□□□□□ -0.29
LONRF1-209ENST00000534446 MTHFSDQ2M296 383 aaKnown RBP13.26□□□□□ -0.29
LONRF1-209ENST00000534446 ZNF530Q6P9A1 599 aaPredicted RBP13.26□□□□□ -0.29
LONRF1-209ENST00000534446 TNS1Q9HBL0 1735 aaKnown RBP13.25□□□□□ -0.29
LONRF1-209ENST00000534446 FCHSD2O94868 740 aa13.25□□□□□ -0.29
LONRF1-209ENST00000534446 PRKAR2BP31323 418 aa13.25□□□□□ -0.29
LONRF1-209ENST00000534446 PRIM1P49642 420 aaKnown RBP13.25□□□□□ -0.29
LONRF1-209ENST00000534446 KDM6AO15550 1401 aaPredicted RBP13.24□□□□□ -0.29
LONRF1-209ENST00000534446 PLSCR1O15162 318 aa13.24□□□□□ -0.29
LONRF1-209ENST00000534446 EZH2Q15910 746 aaKnown RBP13.24□□□□□ -0.29
LONRF1-209ENST00000534446 PHACTR3Q96KR7 559 aa13.24□□□□□ -0.29
LONRF1-209ENST00000534446 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
LONRF1-209ENST00000534446 ANP32CO43423 234 aa13.23□□□□□ -0.29
LONRF1-209ENST00000534446 AKAP4Q5JQC9 854 aa13.23□□□□□ -0.29
LONRF1-209ENST00000534446 PLEKHF1Q96S99 279 aa13.23□□□□□ -0.29
LONRF1-209ENST00000534446 SBF2Q86WG5 1849 aa13.23□□□□□ -0.29
LONRF1-209ENST00000534446 HSP90AB1P08238 724 aaKnown RBP13.22□□□□□ -0.29
LONRF1-209ENST00000534446 CCDC184Q52MB2 194 aa13.22□□□□□ -0.29
LONRF1-209ENST00000534446 C1orf141Q5JVX7 400 aa13.22□□□□□ -0.29
LONRF1-209ENST00000534446 GAS2L2Q8NHY3 880 aa13.22□□□□□ -0.29
LONRF1-209ENST00000534446 DCAF5Q96JK2 942 aa13.22□□□□□ -0.29
LONRF1-209ENST00000534446 PROM2Q8N271 834 aa13.21□□□□□ -0.29
LONRF1-209ENST00000534446 PIGBQ92521 554 aa13.21□□□□□ -0.29
LONRF1-209ENST00000534446 SYTL4Q96C24 671 aaPredicted RBP13.21□□□□□ -0.29
LONRF1-209ENST00000534446 ERVV-2B6SEH9 535 aa13.2□□□□□ -0.3
LONRF1-209ENST00000534446 MPRIPQ6WCQ1 1025 aa13.2□□□□□ -0.3
LONRF1-209ENST00000534446 DOT1LQ8TEK3 1739 aa13.19□□□□□ -0.3
LONRF1-209ENST00000534446 TOGARAM1Q9Y4F4 1720 aa13.19□□□□□ -0.3
LONRF1-209ENST00000534446 RNMTO43148 476 aaKnown RBP13.19□□□□□ -0.3
LONRF1-209ENST00000534446 TXNRD1Q16881 649 aa13.19□□□□□ -0.3
LONRF1-209ENST00000534446 LGR6Q9HBX8 967 aa13.18□□□□□ -0.3
LONRF1-209ENST00000534446 TMOD3Q9NYL9 352 aa13.18□□□□□ -0.3
LONRF1-209ENST00000534446 MAP3K5Q99683 1374 aa13.18□□□□□ -0.3
LONRF1-209ENST00000534446 GNAT3A8MTJ3 354 aa13.17□□□□□ -0.3
LONRF1-209ENST00000534446 IL17REQ8NFR9 667 aa13.17□□□□□ -0.3
LONRF1-209ENST00000534446 ADAMTS8Q9UP79 889 aa13.17□□□□□ -0.3
LONRF1-209ENST00000534446 MRC1P22897 1456 aa13.16□□□□□ -0.3
LONRF1-209ENST00000534446 CABP4P57796 275 aa13.16□□□□□ -0.3
LONRF1-209ENST00000534446 WDR43Q15061 677 aaKnown RBP eCLIP13.16□□□□□ -0.3
LONRF1-209ENST00000534446 PNNQ9H307 717 aaKnown RBP13.16□□□□□ -0.3
LONRF1-209ENST00000534446 SLC52A2Q9HAB3 445 aa13.16□□□□□ -0.3
LONRF1-209ENST00000534446 ATG3Q9NT62 314 aa13.16□□□□□ -0.3
LONRF1-209ENST00000534446 LRRC4BQ9NT99 713 aa13.16□□□□□ -0.3
LONRF1-209ENST00000534446 RGPD3A6NKT7 1758 aaPredicted RBP13.16□□□□□ -0.3
LONRF1-209ENST00000534446 RGPD4Q7Z3J3 1758 aa13.16□□□□□ -0.3
LONRF1-209ENST00000534446 CEMIPQ8WUJ3 1361 aa13.16□□□□□ -0.3
LONRF1-209ENST00000534446 PALLDQ8WX93 1383 aa13.16□□□□□ -0.3
LONRF1-209ENST00000534446 BTAF1O14981 1849 aa13.16□□□□□ -0.3
LONRF1-209ENST00000534446 NFE2L2Q16236 605 aa13.15□□□□□ -0.3
LONRF1-209ENST00000534446 SLC27A3Q5K4L6 730 aa13.15□□□□□ -0.3
LONRF1-209ENST00000534446 SMARCC1Q92922 1105 aaPredicted RBP13.15□□□□□ -0.3
LONRF1-209ENST00000534446 ANO8Q9HCE9 1232 aaPredicted RBP13.15□□□□□ -0.3
LONRF1-209ENST00000534446 ASAP1Q9ULH1 1129 aa13.15□□□□□ -0.3
LONRF1-209ENST00000534446 ADAMTS7Q9UKP4 1686 aa13.15□□□□□ -0.31
LONRF1-209ENST00000534446 NFATC2IPQ8NCF5 419 aa13.14□□□□□ -0.31
LONRF1-209ENST00000534446 PNISRQ8TF01 805 aaKnown RBP13.14□□□□□ -0.31
LONRF1-209ENST00000534446 MRS2Q9HD23 443 aa13.14□□□□□ -0.31
LONRF1-209ENST00000534446 RREB1Q92766 1687 aa13.14□□□□□ -0.31
LONRF1-209ENST00000534446 HTATSF1O43719 755 aaKnown RBP13.13□□□□□ -0.31
LONRF1-209ENST00000534446 NEFMP07197 916 aa13.13□□□□□ -0.31
LONRF1-209ENST00000534446 CCDC146Q8IYE0 955 aa13.13□□□□□ -0.31
LONRF1-209ENST00000534446 MAPK8IP3Q9UPT6 1336 aa13.13□□□□□ -0.31
LONRF1-209ENST00000534446 KAT6BQ8WYB5 2073 aa13.12□□□□□ -0.31
LONRF1-209ENST00000534446 TMPOP42166 694 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms