RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 RNF17Q9BXT8 1623 aaKnown RBP8.22□□□□□ -1.09
CHKA-208ENST00000533910 RPRD2Q5VT52 1461 aaKnown RBP8.22□□□□□ -1.09
CHKA-208ENST00000533910 MLH3Q9UHC1 1453 aa8.22□□□□□ -1.09
CHKA-208ENST00000533910 FDX1P10109 184 aa8.22□□□□□ -1.09
CHKA-208ENST00000533910 TUSC1Q2TAM9 212 aa8.22□□□□□ -1.09
CHKA-208ENST00000533910 MPHOSPH9Q99550 1183 aa8.22□□□□□ -1.09
CHKA-208ENST00000533910 MTRQ99707 1265 aa8.22□□□□□ -1.09
CHKA-208ENST00000533910 ZMYM4Q5VZL5 1548 aa8.22□□□□□ -1.09
CHKA-208ENST00000533910 TEX14Q8IWB6 1497 aa8.21□□□□□ -1.09
CHKA-208ENST00000533910 POM121CA8CG34 1229 aa8.21□□□□□ -1.1
CHKA-208ENST00000533910 SPAG9O60271 1321 aaKnown RBP8.21□□□□□ -1.1
CHKA-208ENST00000533910 DIP2CQ9Y2E4 1556 aa8.2□□□□□ -1.1
CHKA-208ENST00000533910 USP17L8P0C7I0 530 aa8.2□□□□□ -1.1
CHKA-208ENST00000533910 CTDSPL2Q05D32 466 aa8.2□□□□□ -1.1
CHKA-208ENST00000533910 SYMPKQ92797 1274 aaKnown RBP8.2□□□□□ -1.1
CHKA-208ENST00000533910 TRIM52Q96A61 297 aa8.2□□□□□ -1.1
CHKA-208ENST00000533910 SIN3AQ96ST3 1273 aa8.2□□□□□ -1.1
CHKA-208ENST00000533910 PRR14Q9BWN1 585 aa8.2□□□□□ -1.1
CHKA-208ENST00000533910 TET3O43151 1660 aa8.2□□□□□ -1.1
CHKA-208ENST00000533910 APLP1P51693 650 aa8.19□□□□□ -1.1
CHKA-208ENST00000533910 AFAP1Q8N556 730 aa8.19□□□□□ -1.1
CHKA-208ENST00000533910 TSC1Q92574 1164 aa8.19□□□□□ -1.1
CHKA-208ENST00000533910 HMX1Q9NP08 348 aaPredicted RBP8.19□□□□□ -1.1
CHKA-208ENST00000533910 PODXL2Q9NZ53 605 aa8.19□□□□□ -1.1
CHKA-208ENST00000533910 NUP155O75694 1391 aa8.19□□□□□ -1.1
CHKA-208ENST00000533910 TSPOAP1O95153 1857 aa8.19□□□□□ -1.1
CHKA-208ENST00000533910 E9PCH4 1651 aa8.18□□□□□ -1.1
CHKA-208ENST00000533910 ZBTB3Q9H5J0 574 aa8.18□□□□□ -1.1
CHKA-208ENST00000533910 TONSLQ96HA7 1378 aa8.18□□□□□ -1.1
CHKA-208ENST00000533910 ATP10AO60312 1499 aa8.18□□□□□ -1.1
CHKA-208ENST00000533910 GJA5P36382 358 aa8.17□□□□□ -1.1
CHKA-208ENST00000533910 FUT2Q10981 343 aa8.17□□□□□ -1.1
CHKA-208ENST00000533910 LAPTM4AQ15012 233 aa8.17□□□□□ -1.1
CHKA-208ENST00000533910 LRRN4Q8WUT4 740 aa8.17□□□□□ -1.1
CHKA-208ENST00000533910 GJD4Q96KN9 370 aaPredicted RBP8.17□□□□□ -1.1
CHKA-208ENST00000533910 DHX29Q7Z478 1369 aaKnown RBP8.17□□□□□ -1.1
CHKA-208ENST00000533910 A2MP01023 1474 aa8.17□□□□□ -1.1
CHKA-208ENST00000533910 LMTK2Q8IWU2 1503 aa8.17□□□□□ -1.1
CHKA-208ENST00000533910 REREQ9P2R6 1566 aa8.17□□□□□ -1.1
CHKA-208ENST00000533910 SPHKAPQ2M3C7 1700 aa8.17□□□□□ -1.1
CHKA-208ENST00000533910 CFAP99D6REC4 459 aa8.16□□□□□ -1.1
CHKA-208ENST00000533910 GGCXP38435 758 aa8.16□□□□□ -1.1
CHKA-208ENST00000533910 PPP1R18Q6NYC8 613 aa8.16□□□□□ -1.1
CHKA-208ENST00000533910 Q6ZNB5 142 aa8.16□□□□□ -1.1
CHKA-208ENST00000533910 EPS8L1Q8TE68 723 aa8.16□□□□□ -1.1
CHKA-208ENST00000533910 CCDC97Q96F63 343 aaPredicted RBP8.16□□□□□ -1.1
CHKA-208ENST00000533910 CEP152O94986 1710 aa8.15□□□□□ -1.1
CHKA-208ENST00000533910 ZC3H13Q5T200 1668 aaKnown RBP8.15□□□□□ -1.1
CHKA-208ENST00000533910 TRPM2O94759 1503 aa8.15□□□□□ -1.1
CHKA-208ENST00000533910 EFCAB6Q5THR3 1501 aa8.15□□□□□ -1.1
CHKA-208ENST00000533910 C6orf229H3BNL8 230 aa8.15□□□□□ -1.1
CHKA-208ENST00000533910 CFHP08603 1231 aa8.15□□□□□ -1.1
CHKA-208ENST00000533910 USP46P62068 366 aa8.15□□□□□ -1.1
CHKA-208ENST00000533910 NEUROD1Q13562 356 aa8.15□□□□□ -1.1
CHKA-208ENST00000533910 PRPF38BQ5VTL8 546 aaKnown RBP8.15□□□□□ -1.1
CHKA-208ENST00000533910 ARHGEF40Q8TER5 1519 aa8.14□□□□□ -1.11
CHKA-208ENST00000533910 PLA2R1Q13018 1463 aa8.14□□□□□ -1.11
CHKA-208ENST00000533910 PPP1R15AO75807 674 aaPredicted RBP8.14□□□□□ -1.11
CHKA-208ENST00000533910 FAM69CQ0P6D2 419 aa8.14□□□□□ -1.11
CHKA-208ENST00000533910 IRF5Q13568 498 aa8.14□□□□□ -1.11
CHKA-208ENST00000533910 MTMR2Q13614 643 aa8.14□□□□□ -1.11
CHKA-208ENST00000533910 PUS10Q3MIT2 529 aaKnown RBP8.14□□□□□ -1.11
CHKA-208ENST00000533910 ZNF516Q92618 1163 aa8.14□□□□□ -1.11
CHKA-208ENST00000533910 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.14□□□□□ -1.11
CHKA-208ENST00000533910 COPS2P61201 443 aa8.13□□□□□ -1.11
CHKA-208ENST00000533910 TRIM34Q9BYJ4 488 aa8.13□□□□□ -1.11
CHKA-208ENST00000533910 PRKD2Q9BZL6 878 aa8.13□□□□□ -1.11
CHKA-208ENST00000533910 SERPINA10Q9UK55 444 aa8.13□□□□□ -1.11
CHKA-208ENST00000533910 V9GY48 417 aaPredicted RBP8.13□□□□□ -1.11
CHKA-208ENST00000533910 NEURL4Q96JN8 1562 aa8.13□□□□□ -1.11
CHKA-208ENST00000533910 CAMSAP1Q5T5Y3 1602 aa8.12□□□□□ -1.11
CHKA-208ENST00000533910 GPR37L1O60883 481 aa8.12□□□□□ -1.11
CHKA-208ENST00000533910 CALR3Q96L12 384 aaKnown RBP8.12□□□□□ -1.11
CHKA-208ENST00000533910 PCDHB3Q9Y5E6 796 aa8.12□□□□□ -1.11
CHKA-208ENST00000533910 PTPRTO14522 1441 aa8.12□□□□□ -1.11
CHKA-208ENST00000533910 CLTCL1P53675 1640 aa8.11□□□□□ -1.11
CHKA-208ENST00000533910 ADAMTS19Q8TE59 1207 aa8.11□□□□□ -1.11
CHKA-208ENST00000533910 GLMNQ92990 594 aa8.11□□□□□ -1.11
CHKA-208ENST00000533910 ABCC3O15438 1527 aa8.11□□□□□ -1.11
CHKA-208ENST00000533910 AGLP35573 1532 aa8.11□□□□□ -1.11
CHKA-208ENST00000533910 UHRF1BP1Q6BDS2 1440 aa8.11□□□□□ -1.11
CHKA-208ENST00000533910 YEATS2Q9ULM3 1422 aa8.11□□□□□ -1.11
CHKA-208ENST00000533910 KANK1Q14678 1352 aa8.1□□□□□ -1.11
CHKA-208ENST00000533910 SIGLEC1Q9BZZ2 1709 aa8.1□□□□□ -1.11
CHKA-208ENST00000533910 PER1O15534 1290 aaPredicted RBP8.1□□□□□ -1.11
CHKA-208ENST00000533910 GFRA3O60609 400 aa8.1□□□□□ -1.11
CHKA-208ENST00000533910 ZPR1O75312 459 aa8.1□□□□□ -1.11
CHKA-208ENST00000533910 PDIA4P13667 645 aaKnown RBP8.1□□□□□ -1.11
CHKA-208ENST00000533910 KMT5BQ4FZB7 885 aa8.1□□□□□ -1.11
CHKA-208ENST00000533910 CCDC144AA2RUR9 1427 aa8.1□□□□□ -1.11
CHKA-208ENST00000533910 RAPGEF3O95398 923 aa8.09□□□□□ -1.11
CHKA-208ENST00000533910 ATP6V1AP38606 617 aa8.09□□□□□ -1.11
CHKA-208ENST00000533910 VAC14Q08AM6 782 aa8.09□□□□□ -1.11
CHKA-208ENST00000533910 HDGFL1Q5TGJ6 251 aa8.09□□□□□ -1.11
CHKA-208ENST00000533910 NKX2-3Q8TAU0 364 aa8.09□□□□□ -1.11
CHKA-208ENST00000533910 PRR7Q8TB68 274 aa8.09□□□□□ -1.11
CHKA-208ENST00000533910 L3MBTL2Q969R5 705 aa8.09□□□□□ -1.11
CHKA-208ENST00000533910 NDUFB9Q9Y6M9 179 aa8.09□□□□□ -1.11
CHKA-208ENST00000533910 POLR1AO95602 1720 aaPredicted RBP8.09□□□□□ -1.11
CHKA-208ENST00000533910 RALGAPBQ86X10 1494 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms