RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 MTHFSP49914 203 aa18.09■□□□□ 0.49
CAPN1-227ENST00000533909 KAT6BQ8WYB5 2073 aa18.08■□□□□ 0.49
CAPN1-227ENST00000533909 PCDH11XQ9BZA7 1347 aa18.08■□□□□ 0.49
CAPN1-227ENST00000533909 PCDH11YQ9BZA8 1340 aa18.08■□□□□ 0.49
CAPN1-227ENST00000533909 EZH2Q15910 746 aaKnown RBP18.08■□□□□ 0.48
CAPN1-227ENST00000533909 SYTL4Q96C24 671 aaPredicted RBP18.08■□□□□ 0.48
CAPN1-227ENST00000533909 SPG7Q9UQ90 795 aa18.08■□□□□ 0.48
CAPN1-227ENST00000533909 CAMKK2Q96RR4 588 aa18.06■□□□□ 0.48
CAPN1-227ENST00000533909 SBF2Q86WG5 1849 aa18.06■□□□□ 0.48
CAPN1-227ENST00000533909 IGSF1Q8N6C5 1336 aa18.05■□□□□ 0.48
CAPN1-227ENST00000533909 KCNQ2O43526 872 aa18.05■□□□□ 0.48
CAPN1-227ENST00000533909 PTF1AQ7RTS3 328 aa18.04■□□□□ 0.48
CAPN1-227ENST00000533909 CFAP53Q96M91 514 aa18.04■□□□□ 0.48
CAPN1-227ENST00000533909 NCAPD2Q15021 1401 aa18.04■□□□□ 0.48
CAPN1-227ENST00000533909 PLSCR1O15162 318 aa18.03■□□□□ 0.48
CAPN1-227ENST00000533909 DIAPH1O60610 1272 aaKnown RBP18.03■□□□□ 0.48
CAPN1-227ENST00000533909 NBPF14Q5TI25 921 aa18.03■□□□□ 0.48
CAPN1-227ENST00000533909 NHSQ6T4R5 1651 aa18.03■□□□□ 0.48
CAPN1-227ENST00000533909 IL13P35225 146 aa18.02■□□□□ 0.48
CAPN1-227ENST00000533909 PRIM1P49642 420 aaKnown RBP18.02■□□□□ 0.48
CAPN1-227ENST00000533909 DDX10Q13206 875 aaKnown RBP18.02■□□□□ 0.48
CAPN1-227ENST00000533909 SULT6B1Q6IMI4 303 aa18.02■□□□□ 0.48
CAPN1-227ENST00000533909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.02■□□□□ 0.48
CAPN1-227ENST00000533909 PLEKHO1Q53GL0 409 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-227ENST00000533909 U2SURPO15042 1029 aaKnown RBP18■□□□□ 0.47
CAPN1-227ENST00000533909 CYP27B1O15528 508 aa18■□□□□ 0.47
CAPN1-227ENST00000533909 AEBP1Q8IUX7 1158 aa18■□□□□ 0.47
CAPN1-227ENST00000533909 SHANK3Q9BYB0 1731 aa17.99■□□□□ 0.47
CAPN1-227ENST00000533909 PSDA5PKW4 1024 aaPredicted RBP17.99■□□□□ 0.47
CAPN1-227ENST00000533909 AMOTQ4VCS5 1084 aa17.99■□□□□ 0.47
CAPN1-227ENST00000533909 IFNL2Q8IZJ0 200 aa17.99■□□□□ 0.47
CAPN1-227ENST00000533909 PLEKHG2Q9H7P9 1386 aa17.99■□□□□ 0.47
CAPN1-227ENST00000533909 PKD1L3Q7Z443 1732 aa17.98■□□□□ 0.47
CAPN1-227ENST00000533909 PPP2R1AP30153 589 aa17.98■□□□□ 0.47
CAPN1-227ENST00000533909 DOT1LQ8TEK3 1739 aa17.98■□□□□ 0.47
CAPN1-227ENST00000533909 RGPD3A6NKT7 1758 aaPredicted RBP17.97■□□□□ 0.47
CAPN1-227ENST00000533909 RGPD4Q7Z3J3 1758 aa17.97■□□□□ 0.47
CAPN1-227ENST00000533909 HMOX1P09601 288 aa17.97■□□□□ 0.47
CAPN1-227ENST00000533909 R3HDM1Q15032 1099 aaKnown RBP17.97■□□□□ 0.47
CAPN1-227ENST00000533909 TXNRD1Q16881 649 aa17.97■□□□□ 0.47
CAPN1-227ENST00000533909 C1orf141Q5JVX7 400 aa17.97■□□□□ 0.47
CAPN1-227ENST00000533909 ZNF530Q6P9A1 599 aaPredicted RBP17.97■□□□□ 0.47
CAPN1-227ENST00000533909 BTAF1O14981 1849 aa17.96■□□□□ 0.47
CAPN1-227ENST00000533909 HSP90AB1P08238 724 aaKnown RBP17.96■□□□□ 0.47
CAPN1-227ENST00000533909 MPRIPQ6WCQ1 1025 aa17.96■□□□□ 0.47
CAPN1-227ENST00000533909 NUDCQ9Y266 331 aa17.96■□□□□ 0.47
CAPN1-227ENST00000533909 RREB1Q92766 1687 aa17.96■□□□□ 0.47
CAPN1-227ENST00000533909 PHKG2P15735 406 aa17.95■□□□□ 0.46
CAPN1-227ENST00000533909 KDRP35968 1356 aa17.94■□□□□ 0.46
CAPN1-227ENST00000533909 NUP188Q5SRE5 1749 aa17.94■□□□□ 0.46
CAPN1-227ENST00000533909 NKX1-1Q15270 411 aaPredicted RBP17.93■□□□□ 0.46
CAPN1-227ENST00000533909 STK32BQ9NY57 414 aa17.93■□□□□ 0.46
CAPN1-227ENST00000533909 TMOD3Q9NYL9 352 aa17.93■□□□□ 0.46
CAPN1-227ENST00000533909 RALBP1Q15311 655 aa17.92■□□□□ 0.46
CAPN1-227ENST00000533909 COL3A1P02461 1466 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-227ENST00000533909 SLC27A3Q5K4L6 730 aa17.91■□□□□ 0.46
CAPN1-227ENST00000533909 PROM2Q8N271 834 aa17.91■□□□□ 0.46
CAPN1-227ENST00000533909 DCAF5Q96JK2 942 aa17.91■□□□□ 0.46
CAPN1-227ENST00000533909 U2AF1L5P0DN76 240 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-227ENST00000533909 U2AF1Q01081 240 aaKnown RBP eCLIP17.9■□□□□ 0.46
CAPN1-227ENST00000533909 SMARCC1Q92922 1105 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-227ENST00000533909 CCNL1Q9UK58 526 aaPredicted RBP17.89■□□□□ 0.45
CAPN1-227ENST00000533909 ZNF316A6NFI3 1004 aaPredicted RBP17.88■□□□□ 0.45
CAPN1-227ENST00000533909 HMGB2P26583 209 aaKnown RBP17.88■□□□□ 0.45
CAPN1-227ENST00000533909 CABP4P57796 275 aa17.88■□□□□ 0.45
CAPN1-227ENST00000533909 PIGBQ92521 554 aa17.88■□□□□ 0.45
CAPN1-227ENST00000533909 ERVV-2B6SEH9 535 aa17.87■□□□□ 0.45
CAPN1-227ENST00000533909 AKAP4Q5JQC9 854 aa17.87■□□□□ 0.45
CAPN1-227ENST00000533909 ANO8Q9HCE9 1232 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-227ENST00000533909 PALLDQ8WX93 1383 aa17.87■□□□□ 0.45
CAPN1-227ENST00000533909 TOGARAM1Q9Y4F4 1720 aa17.86■□□□□ 0.45
CAPN1-227ENST00000533909 NEFMP07197 916 aa17.85■□□□□ 0.45
CAPN1-227ENST00000533909 PRKAR2BP31323 418 aa17.85■□□□□ 0.45
CAPN1-227ENST00000533909 SLC15A2Q16348 729 aa17.85■□□□□ 0.45
CAPN1-227ENST00000533909 ITGB4P16144 1822 aa17.84■□□□□ 0.45
CAPN1-227ENST00000533909 KCNQ4P56696 695 aa17.84■□□□□ 0.45
CAPN1-227ENST00000533909 MTHFSDQ2M296 383 aaKnown RBP17.84■□□□□ 0.45
CAPN1-227ENST00000533909 GAS2L2Q8NHY3 880 aa17.84■□□□□ 0.45
CAPN1-227ENST00000533909 LRRC4BQ9NT99 713 aa17.84■□□□□ 0.45
CAPN1-227ENST00000533909 MYBBP1AQ9BQG0 1328 aaKnown RBP17.83■□□□□ 0.44
CAPN1-227ENST00000533909 KDM6AO15550 1401 aaPredicted RBP17.82■□□□□ 0.44
CAPN1-227ENST00000533909 FCHSD2O94868 740 aa17.82■□□□□ 0.44
CAPN1-227ENST00000533909 TFCP2L1Q9NZI6 479 aa17.82■□□□□ 0.44
CAPN1-227ENST00000533909 LY75O60449 1722 aa17.81■□□□□ 0.44
CAPN1-227ENST00000533909 RSPH6AQ9H0K4 717 aa17.81■□□□□ 0.44
CAPN1-227ENST00000533909 ASAP1Q9ULH1 1129 aa17.81■□□□□ 0.44
CAPN1-227ENST00000533909 NFATC2IPQ8NCF5 419 aa17.8■□□□□ 0.44
CAPN1-227ENST00000533909 PNNQ9H307 717 aaKnown RBP17.8■□□□□ 0.44
CAPN1-227ENST00000533909 MAP3K5Q99683 1374 aa17.79■□□□□ 0.44
CAPN1-227ENST00000533909 LOC102724428A0A0B4J2F2 783 aa17.79■□□□□ 0.44
CAPN1-227ENST00000533909 GNAT3A8MTJ3 354 aa17.79■□□□□ 0.44
CAPN1-227ENST00000533909 SIK1P57059 783 aa17.79■□□□□ 0.44
CAPN1-227ENST00000533909 ZNF827Q17R98 1081 aa17.79■□□□□ 0.44
CAPN1-227ENST00000533909 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
CAPN1-227ENST00000533909 ATG3Q9NT62 314 aa17.79■□□□□ 0.44
CAPN1-227ENST00000533909 SRCAPQ6ZRS2 3230 aa17.78■□□□□ 0.44
CAPN1-227ENST00000533909 RNMTO43148 476 aaKnown RBP17.78■□□□□ 0.44
CAPN1-227ENST00000533909 MSH5O43196 834 aa17.78■□□□□ 0.44
CAPN1-227ENST00000533909 ATP6V1AP38606 617 aa17.78■□□□□ 0.44
CAPN1-227ENST00000533909 PHACTR3Q96KR7 559 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms