RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 NHSQ6T4R5 1651 aa21.47■■□□□ 1.03
TSKU-204ENST00000533752 DDX54Q8TDD1 881 aaKnown RBP21.47■■□□□ 1.03
TSKU-204ENST00000533752 PCDH11XQ9BZA7 1347 aa21.47■■□□□ 1.03
TSKU-204ENST00000533752 PCDH11YQ9BZA8 1340 aa21.47■■□□□ 1.03
TSKU-204ENST00000533752 RGPD3A6NKT7 1758 aaPredicted RBP21.46■■□□□ 1.03
TSKU-204ENST00000533752 RGPD4Q7Z3J3 1758 aa21.46■■□□□ 1.03
TSKU-204ENST00000533752 IGSF1Q8N6C5 1336 aa21.46■■□□□ 1.03
TSKU-204ENST00000533752 CAMKK2Q96RR4 588 aa21.45■■□□□ 1.02
TSKU-204ENST00000533752 SHANK3Q9BYB0 1731 aa21.45■■□□□ 1.02
TSKU-204ENST00000533752 PKD1L3Q7Z443 1732 aa21.43■■□□□ 1.02
TSKU-204ENST00000533752 PLSCR1O15162 318 aa21.43■■□□□ 1.02
TSKU-204ENST00000533752 MTHFSP49914 203 aa21.43■■□□□ 1.02
TSKU-204ENST00000533752 EZH2Q15910 746 aaKnown RBP21.43■■□□□ 1.02
TSKU-204ENST00000533752 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.43■■□□□ 1.02
TSKU-204ENST00000533752 RREB1Q92766 1687 aa21.42■■□□□ 1.02
TSKU-204ENST00000533752 SPG7Q9UQ90 795 aa21.42■■□□□ 1.02
TSKU-204ENST00000533752 ACSBG1Q96GR2 724 aa21.4■■□□□ 1.02
TSKU-204ENST00000533752 IL13P35225 146 aa21.39■■□□□ 1.01
TSKU-204ENST00000533752 CNGB1Q14028 1251 aaPredicted RBP21.39■■□□□ 1.01
TSKU-204ENST00000533752 KCNQ2O43526 872 aa21.38■■□□□ 1.01
TSKU-204ENST00000533752 PTF1AQ7RTS3 328 aa21.38■■□□□ 1.01
TSKU-204ENST00000533752 DOT1LQ8TEK3 1739 aa21.38■■□□□ 1.01
TSKU-204ENST00000533752 KDRP35968 1356 aa21.37■■□□□ 1.01
TSKU-204ENST00000533752 NUP188Q5SRE5 1749 aa21.37■■□□□ 1.01
TSKU-204ENST00000533752 DIAPH1O60610 1272 aaKnown RBP21.36■■□□□ 1.01
TSKU-204ENST00000533752 BTAF1O14981 1849 aa21.36■■□□□ 1.01
TSKU-204ENST00000533752 CYP27B1O15528 508 aa21.35■■□□□ 1.01
TSKU-204ENST00000533752 CFAP53Q96M91 514 aa21.35■■□□□ 1.01
TSKU-204ENST00000533752 COL3A1P02461 1466 aaPredicted RBP21.34■■□□□ 1.01
TSKU-204ENST00000533752 AMOTQ4VCS5 1084 aa21.34■■□□□ 1.01
TSKU-204ENST00000533752 NBPF14Q5TI25 921 aa21.34■■□□□ 1.01
TSKU-204ENST00000533752 SULT6B1Q6IMI4 303 aa21.34■■□□□ 1.01
TSKU-204ENST00000533752 SYTL4Q96C24 671 aaPredicted RBP21.34■■□□□ 1.01
TSKU-204ENST00000533752 KAT6BQ8WYB5 2073 aa21.33■■□□□ 1.01
TSKU-204ENST00000533752 PRIM1P49642 420 aaKnown RBP21.33■■□□□ 1.01
TSKU-204ENST00000533752 PLEKHO1Q53GL0 409 aaPredicted RBP21.33■■□□□ 1.01
TSKU-204ENST00000533752 IFNL2Q8IZJ0 200 aa21.33■■□□□ 1.01
TSKU-204ENST00000533752 NKX1-1Q15270 411 aaPredicted RBP21.32■■□□□ 1
TSKU-204ENST00000533752 AEBP1Q8IUX7 1158 aa21.32■■□□□ 1
TSKU-204ENST00000533752 PPP2R1AP30153 589 aa21.31■■□□□ 1
TSKU-204ENST00000533752 TXNRD1Q16881 649 aa21.31■■□□□ 1
TSKU-204ENST00000533752 HSP90AB1P08238 724 aaKnown RBP21.3■■□□□ 1
TSKU-204ENST00000533752 PHKG2P15735 406 aa21.3■■□□□ 1
TSKU-204ENST00000533752 DDX10Q13206 875 aaKnown RBP21.28■■□□□ 1
TSKU-204ENST00000533752 TOGARAM1Q9Y4F4 1720 aa21.27■■□□□ 1
TSKU-204ENST00000533752 R3HDM1Q15032 1099 aaKnown RBP21.27■■□□□ 1
TSKU-204ENST00000533752 SLC27A3Q5K4L6 730 aa21.27■■□□□ 1
TSKU-204ENST00000533752 ZNF530Q6P9A1 599 aaPredicted RBP21.27■■□□□ 1
TSKU-204ENST00000533752 PROM2Q8N271 834 aa21.27■■□□□ 1
TSKU-204ENST00000533752 PSDA5PKW4 1024 aaPredicted RBP21.26■□□□□ 0.99
TSKU-204ENST00000533752 C1orf141Q5JVX7 400 aa21.26■□□□□ 0.99
TSKU-204ENST00000533752 NUDCQ9Y266 331 aa21.26■□□□□ 0.99
TSKU-204ENST00000533752 U2SURPO15042 1029 aaKnown RBP21.25■□□□□ 0.99
TSKU-204ENST00000533752 HMOX1P09601 288 aa21.25■□□□□ 0.99
TSKU-204ENST00000533752 RALBP1Q15311 655 aa21.25■□□□□ 0.99
TSKU-204ENST00000533752 DCAF5Q96JK2 942 aa21.25■□□□□ 0.99
TSKU-204ENST00000533752 HMGB2P26583 209 aaKnown RBP21.24■□□□□ 0.99
TSKU-204ENST00000533752 MPRIPQ6WCQ1 1025 aa21.24■□□□□ 0.99
TSKU-204ENST00000533752 SMARCC1Q92922 1105 aaPredicted RBP21.23■□□□□ 0.99
TSKU-204ENST00000533752 STK32BQ9NY57 414 aa21.23■□□□□ 0.99
TSKU-204ENST00000533752 TMOD3Q9NYL9 352 aa21.23■□□□□ 0.99
TSKU-204ENST00000533752 LY75O60449 1722 aa21.22■□□□□ 0.99
TSKU-204ENST00000533752 PAPPAQ13219 1627 aa21.22■□□□□ 0.99
TSKU-204ENST00000533752 ITGB4P16144 1822 aa21.21■□□□□ 0.99
TSKU-204ENST00000533752 ERVV-2B6SEH9 535 aa21.21■□□□□ 0.99
TSKU-204ENST00000533752 ANO8Q9HCE9 1232 aaPredicted RBP21.21■□□□□ 0.99
TSKU-204ENST00000533752 PALLDQ8WX93 1383 aa21.21■□□□□ 0.99
TSKU-204ENST00000533752 KDM6AO15550 1401 aaPredicted RBP21.2■□□□□ 0.98
TSKU-204ENST00000533752 AKAP4Q5JQC9 854 aa21.19■□□□□ 0.98
TSKU-204ENST00000533752 PIGBQ92521 554 aa21.19■□□□□ 0.98
TSKU-204ENST00000533752 CCNL1Q9UK58 526 aaPredicted RBP21.19■□□□□ 0.98
TSKU-204ENST00000533752 LRP5O75197 1615 aa21.18■□□□□ 0.98
TSKU-204ENST00000533752 SLC15A2Q16348 729 aa21.18■□□□□ 0.98
TSKU-204ENST00000533752 LRRC4BQ9NT99 713 aa21.17■□□□□ 0.98
TSKU-204ENST00000533752 U2AF1L5P0DN76 240 aaPredicted RBP21.16■□□□□ 0.98
TSKU-204ENST00000533752 U2AF1Q01081 240 aaKnown RBP eCLIP21.16■□□□□ 0.98
TSKU-204ENST00000533752 GAS2L2Q8NHY3 880 aa21.16■□□□□ 0.98
TSKU-204ENST00000533752 MYBBP1AQ9BQG0 1328 aaKnown RBP21.15■□□□□ 0.98
TSKU-204ENST00000533752 CABP4P57796 275 aa21.15■□□□□ 0.98
TSKU-204ENST00000533752 ZNF316A6NFI3 1004 aaPredicted RBP21.14■□□□□ 0.97
TSKU-204ENST00000533752 MTHFSDQ2M296 383 aaKnown RBP21.14■□□□□ 0.97
TSKU-204ENST00000533752 RSPH6AQ9H0K4 717 aa21.14■□□□□ 0.97
TSKU-204ENST00000533752 SRCAPQ6ZRS2 3230 aa21.14■□□□□ 0.97
TSKU-204ENST00000533752 FCHSD2O94868 740 aa21.13■□□□□ 0.97
TSKU-204ENST00000533752 PRKAR2BP31323 418 aa21.13■□□□□ 0.97
TSKU-204ENST00000533752 CASZ1Q86V15 1759 aa21.12■□□□□ 0.97
TSKU-204ENST00000533752 SCN11AQ9UI33 1791 aa21.12■□□□□ 0.97
TSKU-204ENST00000533752 MRC1P22897 1456 aa21.12■□□□□ 0.97
TSKU-204ENST00000533752 MAP3K5Q99683 1374 aa21.11■□□□□ 0.97
TSKU-204ENST00000533752 ZNF827Q17R98 1081 aa21.11■□□□□ 0.97
TSKU-204ENST00000533752 AKT1S1Q96B36 256 aa21.11■□□□□ 0.97
TSKU-204ENST00000533752 C5P01031 1676 aa21.11■□□□□ 0.97
TSKU-204ENST00000533752 ADAMTS7Q9UKP4 1686 aa21.1■□□□□ 0.97
TSKU-204ENST00000533752 LOC102724428A0A0B4J2F2 783 aa21.1■□□□□ 0.97
TSKU-204ENST00000533752 SIK1P57059 783 aa21.1■□□□□ 0.97
TSKU-204ENST00000533752 ASAP1Q9ULH1 1129 aa21.1■□□□□ 0.97
TSKU-204ENST00000533752 QSER1Q2KHR3 1735 aa21.09■□□□□ 0.97
TSKU-204ENST00000533752 NEFMP07197 916 aa21.09■□□□□ 0.97
TSKU-204ENST00000533752 KCNQ4P56696 695 aa21.09■□□□□ 0.97
TSKU-204ENST00000533752 ATG3Q9NT62 314 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms