RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 C22orf23Q9BZE7 217 aa15□□□□□ -0.01
ATM-222ENST00000533733 MAP3K19Q56UN5 1328 aa14.99□□□□□ -0.01
ATM-222ENST00000533733 SLC4A3P48751 1232 aa14.99□□□□□ -0.01
ATM-222ENST00000533733 RTF1Q92541 710 aaKnown RBP14.99□□□□□ -0.01
ATM-222ENST00000533733 BABAM1Q9NWV8 329 aa14.99□□□□□ -0.01
ATM-222ENST00000533733 SETD1BQ9UPS6 1966 aaKnown RBP14.98□□□□□ -0.01
ATM-222ENST00000533733 HSP90AB2PQ58FF8 381 aa14.98□□□□□ -0.01
ATM-222ENST00000533733 PHRF1Q9P1Y6 1649 aaKnown RBP14.98□□□□□ -0.01
ATM-222ENST00000533733 FAM83GA6ND36 823 aa14.97□□□□□ -0.01
ATM-222ENST00000533733 AEBP1Q8IUX7 1158 aa14.97□□□□□ -0.01
ATM-222ENST00000533733 RPAP2Q8IXW5 612 aaPredicted RBP14.97□□□□□ -0.01
ATM-222ENST00000533733 LTN1O94822 1766 aa14.96□□□□□ -0.01
ATM-222ENST00000533733 AMPHP49418 695 aa14.96□□□□□ -0.01
ATM-222ENST00000533733 RBM25P49756 843 aaKnown RBP14.96□□□□□ -0.01
ATM-222ENST00000533733 FAM208AQ9UK61 1670 aaKnown RBP14.95□□□□□ -0.02
ATM-222ENST00000533733 RGS12O14924 1447 aa14.95□□□□□ -0.02
ATM-222ENST00000533733 ELL2O00472 640 aaPredicted RBP14.95□□□□□ -0.02
ATM-222ENST00000533733 GSE1Q14687 1217 aa14.95□□□□□ -0.02
ATM-222ENST00000533733 ANKRD45Q5TZF3 282 aa14.95□□□□□ -0.02
ATM-222ENST00000533733 LNPKQ9C0E8 428 aa14.95□□□□□ -0.02
ATM-222ENST00000533733 DCTN1Q14203 1278 aa14.94□□□□□ -0.02
ATM-222ENST00000533733 CHMP4AQ9BY43 222 aa14.94□□□□□ -0.02
ATM-222ENST00000533733 TBC1D2Q9BYX2 928 aa14.94□□□□□ -0.02
ATM-222ENST00000533733 DCTPP1Q9H773 170 aa14.94□□□□□ -0.02
ATM-222ENST00000533733 NUTM2FA1L443 756 aa14.93□□□□□ -0.02
ATM-222ENST00000533733 MFAP1P55081 439 aaKnown RBP14.93□□□□□ -0.02
ATM-222ENST00000533733 ANKRD44Q8N8A2 993 aa14.93□□□□□ -0.02
ATM-222ENST00000533733 SNX21Q969T3 373 aa14.92□□□□□ -0.02
ATM-222ENST00000533733 BCL11AQ9H165 835 aa14.92□□□□□ -0.02
ATM-222ENST00000533733 ATP10DQ9P241 1426 aa14.92□□□□□ -0.02
ATM-222ENST00000533733 NWD1Q149M9 1564 aa14.92□□□□□ -0.02
ATM-222ENST00000533733 CCT4P50991 539 aaKnown RBP14.92□□□□□ -0.02
ATM-222ENST00000533733 NLRP6P59044 892 aa14.92□□□□□ -0.02
ATM-222ENST00000533733 MTHFSDQ2M296 383 aaKnown RBP14.92□□□□□ -0.02
ATM-222ENST00000533733 MCM10Q7L590 875 aa14.92□□□□□ -0.02
ATM-222ENST00000533733 HSCBQ8IWL3 235 aa14.92□□□□□ -0.02
ATM-222ENST00000533733 ANTXR1Q9H6X2 564 aa14.92□□□□□ -0.02
ATM-222ENST00000533733 TSPYL4Q9UJ04 414 aa14.92□□□□□ -0.02
ATM-222ENST00000533733 HMMRO75330 724 aa14.91□□□□□ -0.02
ATM-222ENST00000533733 ANKLE2Q86XL3 938 aa14.91□□□□□ -0.02
ATM-222ENST00000533733 SIRT2Q8IXJ6 389 aa14.91□□□□□ -0.02
ATM-222ENST00000533733 EYA1Q99502 592 aa14.91□□□□□ -0.02
ATM-222ENST00000533733 PXDNLA1KZ92 1463 aa14.91□□□□□ -0.02
ATM-222ENST00000533733 ADAMTSL3P82987 1691 aa14.9□□□□□ -0.02
ATM-222ENST00000533733 KCNA6P17658 529 aa14.9□□□□□ -0.02
ATM-222ENST00000533733 HOXC9P31274 260 aa14.9□□□□□ -0.02
ATM-222ENST00000533733 ADGRL3Q9HAR2 1447 aa14.9□□□□□ -0.02
ATM-222ENST00000533733 GNAT3A8MTJ3 354 aa14.89□□□□□ -0.03
ATM-222ENST00000533733 STK31Q9BXU1 1019 aa14.89□□□□□ -0.03
ATM-222ENST00000533733 MAP3K5Q99683 1374 aa14.89□□□□□ -0.03
ATM-222ENST00000533733 CDC45O75419 566 aa14.89□□□□□ -0.03
ATM-222ENST00000533733 NCOA3Q9Y6Q9 1424 aa14.88□□□□□ -0.03
ATM-222ENST00000533733 MSH6P52701 1360 aa14.88□□□□□ -0.03
ATM-222ENST00000533733 FRAT2O75474 233 aaPredicted RBP14.88□□□□□ -0.03
ATM-222ENST00000533733 CCDC30Q5VVM6 783 aa14.88□□□□□ -0.03
ATM-222ENST00000533733 C1orf115Q9H7X2 142 aa14.88□□□□□ -0.03
ATM-222ENST00000533733 CHMP5Q9NZZ3 219 aa14.88□□□□□ -0.03
ATM-222ENST00000533733 PHF8Q9UPP1 1060 aa14.88□□□□□ -0.03
ATM-222ENST00000533733 NFAT5O94916 1531 aa14.87□□□□□ -0.03
ATM-222ENST00000533733 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
ATM-222ENST00000533733 CEP85Q6P2H3 762 aa14.87□□□□□ -0.03
ATM-222ENST00000533733 ABTB2Q8N961 1025 aa14.87□□□□□ -0.03
ATM-222ENST00000533733 KCNH5Q8NCM2 988 aa14.87□□□□□ -0.03
ATM-222ENST00000533733 LMO7Q8WWI1 1683 aa14.87□□□□□ -0.03
ATM-222ENST00000533733 CIZ1Q9ULV3 898 aaPredicted RBP14.86□□□□□ -0.03
ATM-222ENST00000533733 MED1Q15648 1581 aaPredicted RBP14.86□□□□□ -0.03
ATM-222ENST00000533733 KIF1AQ12756 1690 aa14.86□□□□□ -0.03
ATM-222ENST00000533733 KDM3BQ7LBC6 1761 aa14.86□□□□□ -0.03
ATM-222ENST00000533733 CASC1Q6TDU7 716 aa14.85□□□□□ -0.03
ATM-222ENST00000533733 SLKQ9H2G2 1235 aaPredicted RBP14.85□□□□□ -0.03
ATM-222ENST00000533733 LMTK3Q96Q04 1460 aa14.84□□□□□ -0.03
ATM-222ENST00000533733 SOX12O15370 315 aa14.84□□□□□ -0.03
ATM-222ENST00000533733 GNAI3P08754 354 aa14.84□□□□□ -0.03
ATM-222ENST00000533733 HOXB7P09629 217 aa14.84□□□□□ -0.03
ATM-222ENST00000533733 TAF7Q15545 349 aaPredicted RBP14.84□□□□□ -0.03
ATM-222ENST00000533733 TTC22Q5TAA0 569 aa14.84□□□□□ -0.03
ATM-222ENST00000533733 TBC1D9Q6ZT07 1266 aa14.84□□□□□ -0.03
ATM-222ENST00000533733 PLEKHM2Q8IWE5 1019 aa14.84□□□□□ -0.03
ATM-222ENST00000533733 IP6K1Q92551 441 aa14.84□□□□□ -0.03
ATM-222ENST00000533733 PTMSP20962 102 aa14.83□□□□□ -0.03
ATM-222ENST00000533733 OVOS2A0A0G2JMS6 1433 aa14.83□□□□□ -0.03
ATM-222ENST00000533733 NCAPD2Q15021 1401 aa14.83□□□□□ -0.04
ATM-222ENST00000533733 CAMTA1Q9Y6Y1 1673 aa14.83□□□□□ -0.04
ATM-222ENST00000533733 SLIT3O75094 1523 aa14.82□□□□□ -0.04
ATM-222ENST00000533733 FOXO3O43524 673 aa14.82□□□□□ -0.04
ATM-222ENST00000533733 GNAI2P04899 355 aa14.82□□□□□ -0.04
ATM-222ENST00000533733 KRT24Q2M2I5 525 aa14.82□□□□□ -0.04
ATM-222ENST00000533733 OSBPL3Q9H4L5 887 aa14.82□□□□□ -0.04
ATM-222ENST00000533733 CEMIPQ8WUJ3 1361 aa14.82□□□□□ -0.04
ATM-222ENST00000533733 TUBGCP6Q96RT7 1819 aa14.81□□□□□ -0.04
ATM-222ENST00000533733 IL27Q8NEV9 243 aa14.81□□□□□ -0.04
ATM-222ENST00000533733 NPHP4O75161 1426 aaPredicted RBP14.81□□□□□ -0.04
ATM-222ENST00000533733 MEIS3Q99687 375 aa14.8□□□□□ -0.04
ATM-222ENST00000533733 FLIIQ13045 1269 aa14.8□□□□□ -0.04
ATM-222ENST00000533733 MST1RQ04912 1400 aa14.79□□□□□ -0.04
ATM-222ENST00000533733 DDX11L8A8MPP1 907 aa14.79□□□□□ -0.04
ATM-222ENST00000533733 TRPM3Q9HCF6 1732 aaPredicted RBP14.79□□□□□ -0.04
ATM-222ENST00000533733 HSP90AB1P08238 724 aaKnown RBP14.78□□□□□ -0.04
ATM-222ENST00000533733 GSPT1P15170 499 aaKnown RBP14.78□□□□□ -0.04
ATM-222ENST00000533733 RABEP1Q15276 862 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms