RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 ZNF428Q96B54 188 aa15.19■□□□□ 0.02
CLP1-205ENST00000533682 RWDD1Q9H446 243 aaPredicted RBP15.19■□□□□ 0.02
CLP1-205ENST00000533682 NBPF6Q5VWK0 638 aa15.18■□□□□ 0.02
CLP1-205ENST00000533682 RTF1Q92541 710 aaKnown RBP15.18■□□□□ 0.02
CLP1-205ENST00000533682 NBPF4Q96M43 638 aa15.18■□□□□ 0.02
CLP1-205ENST00000533682 LRRC59Q96AG4 307 aaKnown RBP15.18■□□□□ 0.02
CLP1-205ENST00000533682 IPO9Q96P70 1041 aaKnown RBP15.18■□□□□ 0.02
CLP1-205ENST00000533682 C1orf115Q9H7X2 142 aa15.18■□□□□ 0.02
CLP1-205ENST00000533682 FAM161AQ3B820 660 aa15.17■□□□□ 0.02
CLP1-205ENST00000533682 IP6K1Q92551 441 aa15.17■□□□□ 0.02
CLP1-205ENST00000533682 C19orf44Q9H6X5 657 aa15.17■□□□□ 0.02
CLP1-205ENST00000533682 GCP02774 474 aa15.17■□□□□ 0.02
CLP1-205ENST00000533682 KRT28Q7Z3Y7 464 aa15.16■□□□□ 0.02
CLP1-205ENST00000533682 NFAT5O94916 1531 aa15.16■□□□□ 0.02
CLP1-205ENST00000533682 USP54Q70EL1 1684 aa15.16■□□□□ 0.02
CLP1-205ENST00000533682 STRCP1A6NGW2 1772 aa15.16■□□□□ 0.02
CLP1-205ENST00000533682 ZBTB7BO15156 539 aaPredicted RBP15.16■□□□□ 0.02
CLP1-205ENST00000533682 TSPYL4Q9UJ04 414 aa15.16■□□□□ 0.02
CLP1-205ENST00000533682 RGPD2P0DJD1 1756 aa15.16■□□□□ 0.02
CLP1-205ENST00000533682 IL17REQ8NFR9 667 aa15.15■□□□□ 0.02
CLP1-205ENST00000533682 GAS2L2Q8NHY3 880 aa15.15■□□□□ 0.02
CLP1-205ENST00000533682 TMEM94Q12767 1356 aa15.15■□□□□ 0.02
CLP1-205ENST00000533682 C1orf167Q5SNV9 1468 aa15.14■□□□□ 0.01
CLP1-205ENST00000533682 KIF24Q5T7B8 1368 aa15.14■□□□□ 0.01
CLP1-205ENST00000533682 ARHGAP45Q92619 1136 aa15.14■□□□□ 0.01
CLP1-205ENST00000533682 AXIN2Q9Y2T1 843 aa15.14■□□□□ 0.01
CLP1-205ENST00000533682 GNAT3A8MTJ3 354 aa15.14■□□□□ 0.01
CLP1-205ENST00000533682 SEC24BO95487 1268 aa15.14■□□□□ 0.01
CLP1-205ENST00000533682 NOP58Q9Y2X3 529 aaKnown RBP15.14■□□□□ 0.01
CLP1-205ENST00000533682 ABCC4O15439 1325 aa15.13■□□□□ 0.01
CLP1-205ENST00000533682 HDAC1Q13547 482 aaPredicted RBP15.13■□□□□ 0.01
CLP1-205ENST00000533682 KCNH5Q8NCM2 988 aa15.13■□□□□ 0.01
CLP1-205ENST00000533682 ATF3P18847 181 aa15.12■□□□□ 0.01
CLP1-205ENST00000533682 ARHGEF25Q86VW2 580 aa15.12■□□□□ 0.01
CLP1-205ENST00000533682 NECTIN2Q92692 538 aa15.12■□□□□ 0.01
CLP1-205ENST00000533682 MSH6P52701 1360 aa15.12■□□□□ 0.01
CLP1-205ENST00000533682 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
CLP1-205ENST00000533682 ZC3H6P61129 1189 aaKnown RBP15.12■□□□□ 0.01
CLP1-205ENST00000533682 G2E3Q7L622 706 aa15.11■□□□□ 0.01
CLP1-205ENST00000533682 SIRT2Q8IXJ6 389 aa15.11■□□□□ 0.01
CLP1-205ENST00000533682 LGR6Q9HBX8 967 aa15.11■□□□□ 0.01
CLP1-205ENST00000533682 ZBTB47Q9UFB7 747 aaPredicted RBP15.11■□□□□ 0.01
CLP1-205ENST00000533682 RTL1A6NKG5 1358 aa15.1■□□□□ 0.01
CLP1-205ENST00000533682 KIAA0232Q92628 1395 aa15.1■□□□□ 0.01
CLP1-205ENST00000533682 CABLES1Q8TDN4 633 aa15.1■□□□□ 0.01
CLP1-205ENST00000533682 SMC5Q8IY18 1101 aa15.09■□□□□ 0.01
CLP1-205ENST00000533682 API5Q9BZZ5 524 aaKnown RBP15.09■□□□□ 0.01
CLP1-205ENST00000533682 MAP3K5Q99683 1374 aa15.09■□□□□ 0.01
CLP1-205ENST00000533682 TRPM3Q9HCF6 1732 aaPredicted RBP15.09■□□□□ 0.01
CLP1-205ENST00000533682 KDM4FA0A1W2PPD8 638 aa15.08■□□□□ 0.01
CLP1-205ENST00000533682 RGS12O14924 1447 aa15.08■□□□□ 0
CLP1-205ENST00000533682 MST1RQ04912 1400 aa15.08■□□□□ 0
CLP1-205ENST00000533682 F6X3S4 739 aa15.08■□□□□ 0
CLP1-205ENST00000533682 ANKRD24Q8TF21 1146 aa15.08■□□□□ 0
CLP1-205ENST00000533682 RGPD5Q99666 1765 aa15.08■□□□□ 0
CLP1-205ENST00000533682 SLC4A3P48751 1232 aa15.07■□□□□ 0
CLP1-205ENST00000533682 HTATSF1O43719 755 aaKnown RBP15.07■□□□□ 0
CLP1-205ENST00000533682 LNPKQ9C0E8 428 aa15.07■□□□□ 0
CLP1-205ENST00000533682 TAF7Q15545 349 aaPredicted RBP15.06■□□□□ 0
CLP1-205ENST00000533682 UBE2Q2Q8WVN8 375 aa15.06■□□□□ 0
CLP1-205ENST00000533682 USP19O94966 1318 aa15.06■□□□□ 0
CLP1-205ENST00000533682 MPRIPQ6WCQ1 1025 aa15.06■□□□□ 0
CLP1-205ENST00000533682 SLIT3O75094 1523 aa15.05■□□□□ 0
CLP1-205ENST00000533682 KCNQ3O43525 872 aa15.05■□□□□ -0
CLP1-205ENST00000533682 INTS3Q68E01 1043 aaKnown RBP15.05■□□□□ -0
CLP1-205ENST00000533682 SLC4A10Q6U841 1118 aa15.05■□□□□ -0
CLP1-205ENST00000533682 NUCB1Q02818 461 aa15.04■□□□□ -0
CLP1-205ENST00000533682 ZNF530Q6P9A1 599 aaPredicted RBP15.04■□□□□ -0
CLP1-205ENST00000533682 LRRC37A3O60309 1634 aa15.04■□□□□ -0
CLP1-205ENST00000533682 MED1Q15648 1581 aaPredicted RBP15.03■□□□□ -0
CLP1-205ENST00000533682 HAP1P54257 671 aaPredicted RBP15.03■□□□□ -0
CLP1-205ENST00000533682 ANKRD45Q5TZF3 282 aa15.03■□□□□ -0
CLP1-205ENST00000533682 MEIS3Q99687 375 aa15.03■□□□□ -0
CLP1-205ENST00000533682 VIRMAQ69YN4 1812 aaKnown RBP15.03■□□□□ -0
CLP1-205ENST00000533682 CHRNA2Q15822 529 aa15.03■□□□□ -0
CLP1-205ENST00000533682 CADPS2Q86UW7 1296 aa15.02■□□□□ -0
CLP1-205ENST00000533682 CHD1LQ86WJ1 897 aa15.02■□□□□ -0
CLP1-205ENST00000533682 PHRF1Q9P1Y6 1649 aaKnown RBP15.02■□□□□ -0
CLP1-205ENST00000533682 PTPRCP08575 1304 aa15.02□□□□□ -0.01
CLP1-205ENST00000533682 KIF1AQ12756 1690 aa15.02□□□□□ -0.01
CLP1-205ENST00000533682 CEMIPQ8WUJ3 1361 aa15.02□□□□□ -0.01
CLP1-205ENST00000533682 PXDNQ92626 1479 aa15.02□□□□□ -0.01
CLP1-205ENST00000533682 ALS2Q96Q42 1657 aa15.02□□□□□ -0.01
CLP1-205ENST00000533682 ZNF335Q9H4Z2 1342 aaPredicted RBP15.01□□□□□ -0.01
CLP1-205ENST00000533682 XIRP1Q702N8 1843 aaKnown RBP15.01□□□□□ -0.01
CLP1-205ENST00000533682 ERBB3P21860 1342 aa15□□□□□ -0.01
CLP1-205ENST00000533682 EIF2S2P20042 333 aaKnown RBP15□□□□□ -0.01
CLP1-205ENST00000533682 NBR1Q14596 966 aa15□□□□□ -0.01
CLP1-205ENST00000533682 PLEKHO1Q53GL0 409 aaPredicted RBP15□□□□□ -0.01
CLP1-205ENST00000533682 STK31Q9BXU1 1019 aa15□□□□□ -0.01
CLP1-205ENST00000533682 FLIIQ13045 1269 aa15□□□□□ -0.01
CLP1-205ENST00000533682 CHMP4BQ9H444 224 aaKnown RBP15□□□□□ -0.01
CLP1-205ENST00000533682 STRCQ7RTU9 1775 aa14.99□□□□□ -0.01
CLP1-205ENST00000533682 FKBP5Q13451 457 aaPredicted RBP14.99□□□□□ -0.01
CLP1-205ENST00000533682 AKAP4Q5JQC9 854 aa14.99□□□□□ -0.01
CLP1-205ENST00000533682 CCDC30Q5VVM6 783 aa14.99□□□□□ -0.01
CLP1-205ENST00000533682 PHAXQ9H814 394 aaKnown RBP14.99□□□□□ -0.01
CLP1-205ENST00000533682 NLRP2Q9NX02 1062 aa14.99□□□□□ -0.01
CLP1-205ENST00000533682 LMTK3Q96Q04 1460 aa14.99□□□□□ -0.01
CLP1-205ENST00000533682 NPHP3Q7Z494 1330 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms