RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 BCL9O00512 1426 aa23.62■■□□□ 1.37
NXF1-217ENST00000533671 ACSBG1Q96GR2 724 aa23.62■■□□□ 1.37
NXF1-217ENST00000533671 BCL11BQ9C0K0 894 aaPredicted RBP23.61■■□□□ 1.37
NXF1-217ENST00000533671 SHANK3Q9BYB0 1731 aa23.61■■□□□ 1.37
NXF1-217ENST00000533671 IGSF1Q8N6C5 1336 aa23.59■■□□□ 1.37
NXF1-217ENST00000533671 NCAPD2Q15021 1401 aa23.59■■□□□ 1.37
NXF1-217ENST00000533671 SPG7Q9UQ90 795 aa23.59■■□□□ 1.37
NXF1-217ENST00000533671 PCDH11XQ9BZA7 1347 aa23.59■■□□□ 1.37
NXF1-217ENST00000533671 PCDH11YQ9BZA8 1340 aa23.59■■□□□ 1.37
NXF1-217ENST00000533671 DIAPH1O60610 1272 aaKnown RBP23.58■■□□□ 1.37
NXF1-217ENST00000533671 EZH2Q15910 746 aaKnown RBP23.58■■□□□ 1.37
NXF1-217ENST00000533671 NHSQ6T4R5 1651 aa23.57■■□□□ 1.36
NXF1-217ENST00000533671 IL13P35225 146 aa23.57■■□□□ 1.36
NXF1-217ENST00000533671 CFAP53Q96M91 514 aa23.57■■□□□ 1.36
NXF1-217ENST00000533671 PKD1L3Q7Z443 1732 aa23.56■■□□□ 1.36
NXF1-217ENST00000533671 SYTL4Q96C24 671 aaPredicted RBP23.56■■□□□ 1.36
NXF1-217ENST00000533671 KCNQ2O43526 872 aa23.55■■□□□ 1.36
NXF1-217ENST00000533671 SULT6B1Q6IMI4 303 aa23.55■■□□□ 1.36
NXF1-217ENST00000533671 PTF1AQ7RTS3 328 aa23.55■■□□□ 1.36
NXF1-217ENST00000533671 DOT1LQ8TEK3 1739 aa23.55■■□□□ 1.36
NXF1-217ENST00000533671 CAMKK2Q96RR4 588 aa23.54■■□□□ 1.36
NXF1-217ENST00000533671 PARD3Q8TEW0 1356 aa23.53■■□□□ 1.36
NXF1-217ENST00000533671 PPP2R1AP30153 589 aa23.53■■□□□ 1.36
NXF1-217ENST00000533671 BTAF1O14981 1849 aa23.52■■□□□ 1.36
NXF1-217ENST00000533671 PLEKHO1Q53GL0 409 aaPredicted RBP23.52■■□□□ 1.36
NXF1-217ENST00000533671 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.52■■□□□ 1.361e-9■■□□□ 14.3
NXF1-217ENST00000533671 U2SURPO15042 1029 aaKnown RBP23.51■■□□□ 1.35
NXF1-217ENST00000533671 PLSCR1O15162 318 aa23.51■■□□□ 1.35
NXF1-217ENST00000533671 AEBP1Q8IUX7 1158 aa23.51■■□□□ 1.35
NXF1-217ENST00000533671 RGPD3A6NKT7 1758 aaPredicted RBP23.5■■□□□ 1.35
NXF1-217ENST00000533671 RGPD4Q7Z3J3 1758 aa23.5■■□□□ 1.35
NXF1-217ENST00000533671 CYP27B1O15528 508 aa23.5■■□□□ 1.35
NXF1-217ENST00000533671 PRIM1P49642 420 aaKnown RBP23.5■■□□□ 1.35
NXF1-217ENST00000533671 HMOX1P09601 288 aa23.49■■□□□ 1.35
NXF1-217ENST00000533671 AMOTQ4VCS5 1084 aa23.49■■□□□ 1.35
NXF1-217ENST00000533671 IFNL2Q8IZJ0 200 aa23.49■■□□□ 1.35
NXF1-217ENST00000533671 RREB1Q92766 1687 aa23.48■■□□□ 1.35
NXF1-217ENST00000533671 NUDCQ9Y266 331 aa23.48■■□□□ 1.35
NXF1-217ENST00000533671 PLEKHG2Q9H7P9 1386 aa23.48■■□□□ 1.35
NXF1-217ENST00000533671 ZNF316A6NFI3 1004 aaPredicted RBP23.47■■□□□ 1.35
NXF1-217ENST00000533671 COL3A1P02461 1466 aaPredicted RBP23.46■■□□□ 1.35
NXF1-217ENST00000533671 NBPF14Q5TI25 921 aa23.46■■□□□ 1.35
NXF1-217ENST00000533671 ZNF530Q6P9A1 599 aaPredicted RBP23.46■■□□□ 1.35
NXF1-217ENST00000533671 NUP188Q5SRE5 1749 aa23.45■■□□□ 1.34
NXF1-217ENST00000533671 KDRP35968 1356 aa23.45■■□□□ 1.34
NXF1-217ENST00000533671 PHKG2P15735 406 aa23.45■■□□□ 1.34
NXF1-217ENST00000533671 RALBP1Q15311 655 aa23.45■■□□□ 1.34
NXF1-217ENST00000533671 ITGB4P16144 1822 aa23.45■■□□□ 1.34
NXF1-217ENST00000533671 C1orf141Q5JVX7 400 aa23.44■■□□□ 1.34
NXF1-217ENST00000533671 HSP90AB1P08238 724 aaKnown RBP23.43■■□□□ 1.34
NXF1-217ENST00000533671 MPRIPQ6WCQ1 1025 aa23.43■■□□□ 1.34
NXF1-217ENST00000533671 NKX1-1Q15270 411 aaPredicted RBP23.42■■□□□ 1.34
NXF1-217ENST00000533671 TXNRD1Q16881 649 aa23.42■■□□□ 1.34
NXF1-217ENST00000533671 TOGARAM1Q9Y4F4 1720 aa23.41■■□□□ 1.34
NXF1-217ENST00000533671 PSDA5PKW4 1024 aaPredicted RBP23.4■■□□□ 1.34
NXF1-217ENST00000533671 U2AF1L5P0DN76 240 aaPredicted RBP23.39■■□□□ 1.33
NXF1-217ENST00000533671 U2AF1Q01081 240 aaKnown RBP eCLIP23.39■■□□□ 1.33
NXF1-217ENST00000533671 R3HDM1Q15032 1099 aaKnown RBP23.39■■□□□ 1.33
NXF1-217ENST00000533671 PROM2Q8N271 834 aa23.38■■□□□ 1.33
NXF1-217ENST00000533671 TMOD3Q9NYL9 352 aa23.38■■□□□ 1.33
NXF1-217ENST00000533671 DCAF5Q96JK2 942 aa23.37■■□□□ 1.33
NXF1-217ENST00000533671 MYBBP1AQ9BQG0 1328 aaKnown RBP23.35■■□□□ 1.33
NXF1-217ENST00000533671 AKAP4Q5JQC9 854 aa23.35■■□□□ 1.33
NXF1-217ENST00000533671 LY75O60449 1722 aa23.34■■□□□ 1.33
NXF1-217ENST00000533671 VIRMAQ69YN4 1812 aaKnown RBP23.34■■□□□ 1.33
NXF1-217ENST00000533671 STK32BQ9NY57 414 aa23.34■■□□□ 1.33
NXF1-217ENST00000533671 ERVV-2B6SEH9 535 aa23.33■■□□□ 1.33
NXF1-217ENST00000533671 PRKAR2BP31323 418 aa23.33■■□□□ 1.33
NXF1-217ENST00000533671 MTHFSDQ2M296 383 aaKnown RBP23.33■■□□□ 1.33
NXF1-217ENST00000533671 SLC27A3Q5K4L6 730 aa23.33■■□□□ 1.33
NXF1-217ENST00000533671 PIGBQ92521 554 aa23.33■■□□□ 1.33
NXF1-217ENST00000533671 SMARCC1Q92922 1105 aaPredicted RBP23.33■■□□□ 1.33
NXF1-217ENST00000533671 CABP4P57796 275 aa23.32■■□□□ 1.32
NXF1-217ENST00000533671 CCNL1Q9UK58 526 aaPredicted RBP23.32■■□□□ 1.32
NXF1-217ENST00000533671 SCN11AQ9UI33 1791 aa23.32■■□□□ 1.32
NXF1-217ENST00000533671 NEFMP07197 916 aa23.31■■□□□ 1.32
NXF1-217ENST00000533671 GAS2L2Q8NHY3 880 aa23.31■■□□□ 1.32
NXF1-217ENST00000533671 RSPH6AQ9H0K4 717 aa23.31■■□□□ 1.32
NXF1-217ENST00000533671 PALLDQ8WX93 1383 aa23.3■■□□□ 1.32
NXF1-217ENST00000533671 FCHSD2O94868 740 aa23.3■■□□□ 1.32
NXF1-217ENST00000533671 KDM6AO15550 1401 aaPredicted RBP23.29■■□□□ 1.32
NXF1-217ENST00000533671 PRKRIP1Q9H875 184 aaPredicted RBP23.29■■□□□ 1.32
NXF1-217ENST00000533671 ANO8Q9HCE9 1232 aaPredicted RBP23.29■■□□□ 1.32
NXF1-217ENST00000533671 LRRC4BQ9NT99 713 aa23.29■■□□□ 1.32
NXF1-217ENST00000533671 KCNQ4P56696 695 aa23.28■■□□□ 1.32
NXF1-217ENST00000533671 HMGB2P26583 209 aaKnown RBP23.27■■□□□ 1.32
NXF1-217ENST00000533671 SLC15A2Q16348 729 aa23.27■■□□□ 1.32
NXF1-217ENST00000533671 PNNQ9H307 717 aaKnown RBP23.26■■□□□ 1.31
NXF1-217ENST00000533671 ASAP1Q9ULH1 1129 aa23.26■■□□□ 1.31
NXF1-217ENST00000533671 RNMTO43148 476 aaKnown RBP23.25■■□□□ 1.31
NXF1-217ENST00000533671 PHACTR3Q96KR7 559 aa23.25■■□□□ 1.31
NXF1-217ENST00000533671 GNAT3A8MTJ3 354 aa23.24■■□□□ 1.31
NXF1-217ENST00000533671 NFATC2IPQ8NCF5 419 aa23.24■■□□□ 1.31
NXF1-217ENST00000533671 LGR6Q9HBX8 967 aa23.24■■□□□ 1.31
NXF1-217ENST00000533671 ATG3Q9NT62 314 aa23.24■■□□□ 1.31
NXF1-217ENST00000533671 MAP3K5Q99683 1374 aa23.24■■□□□ 1.31
NXF1-217ENST00000533671 PAPPAQ13219 1627 aa23.23■■□□□ 1.31
NXF1-217ENST00000533671 C5P01031 1676 aa23.22■■□□□ 1.31
NXF1-217ENST00000533671 TAF1LQ8IZX4 1826 aa23.22■■□□□ 1.31
NXF1-217ENST00000533671 RBM42Q9BTD8 480 aaKnown RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms