RNA–Protein interactions for RNA: ENST00000533619.5

FGFR1-239, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-239ENST00000533619 DDX54Q8TDD1 881 aaKnown RBP23.04■■□□□ 1.28
FGFR1-239ENST00000533619 RGPD1P0DJD0 1748 aa23.04■■□□□ 1.28
FGFR1-239ENST00000533619 PLEKHG2Q9H7P9 1386 aa23.03■■□□□ 1.28
FGFR1-239ENST00000533619 TRIM37O94972 964 aa23.03■■□□□ 1.28
FGFR1-239ENST00000533619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.03■■□□□ 1.28
FGFR1-239ENST00000533619 SPG7Q9UQ90 795 aa23.02■■□□□ 1.28
FGFR1-239ENST00000533619 BAG6P46379 1132 aa23.01■■□□□ 1.27
FGFR1-239ENST00000533619 SBF2Q86WG5 1849 aa23.01■■□□□ 1.27
FGFR1-239ENST00000533619 SULT6B1Q6IMI4 303 aa23■■□□□ 1.27
FGFR1-239ENST00000533619 PCDH11XQ9BZA7 1347 aa23■■□□□ 1.27
FGFR1-239ENST00000533619 PCDH11YQ9BZA8 1340 aa23■■□□□ 1.27
FGFR1-239ENST00000533619 KAT6BQ8WYB5 2073 aa22.99■■□□□ 1.27
FGFR1-239ENST00000533619 NUDCQ9Y266 331 aa22.99■■□□□ 1.27
FGFR1-239ENST00000533619 BCL11BQ9C0K0 894 aaPredicted RBP22.98■■□□□ 1.27
FGFR1-239ENST00000533619 KDRP35968 1356 aa22.98■■□□□ 1.27
FGFR1-239ENST00000533619 COL3A1P02461 1466 aaPredicted RBP22.97■■□□□ 1.27
FGFR1-239ENST00000533619 SHANK3Q9BYB0 1731 aa22.96■■□□□ 1.27
FGFR1-239ENST00000533619 APBA3O96018 575 aa22.96■■□□□ 1.27
FGFR1-239ENST00000533619 AMOTQ4VCS5 1084 aa22.96■■□□□ 1.27
FGFR1-239ENST00000533619 PLEKHO1Q53GL0 409 aaPredicted RBP22.96■■□□□ 1.27
FGFR1-239ENST00000533619 PKD1L3Q7Z443 1732 aa22.96■■□□□ 1.27
FGFR1-239ENST00000533619 U2SURPO15042 1029 aaKnown RBP22.95■■□□□ 1.26
FGFR1-239ENST00000533619 AEBP1Q8IUX7 1158 aa22.95■■□□□ 1.26
FGFR1-239ENST00000533619 TNS1Q9HBL0 1735 aaKnown RBP22.94■■□□□ 1.26
FGFR1-239ENST00000533619 DEFB132Q7Z7B7 95 aa22.93■■□□□ 1.26
FGFR1-239ENST00000533619 IFNL2Q8IZJ0 200 aa22.93■■□□□ 1.26
FGFR1-239ENST00000533619 MYBBP1AQ9BQG0 1328 aaKnown RBP22.92■■□□□ 1.26
FGFR1-239ENST00000533619 CYP27B1O15528 508 aa22.92■■□□□ 1.26
FGFR1-239ENST00000533619 HMOX1P09601 288 aa22.92■■□□□ 1.26
FGFR1-239ENST00000533619 ACSBG1Q96GR2 724 aa22.92■■□□□ 1.26
FGFR1-239ENST00000533619 PRKRIP1Q9H875 184 aaPredicted RBP22.92■■□□□ 1.26
FGFR1-239ENST00000533619 EN1Q05925 392 aaPredicted RBP22.91■■□□□ 1.26
FGFR1-239ENST00000533619 PLSCR1O15162 318 aa22.9■■□□□ 1.26
FGFR1-239ENST00000533619 NKX1-1Q15270 411 aaPredicted RBP22.9■■□□□ 1.26
FGFR1-239ENST00000533619 NHSQ6T4R5 1651 aa22.9■■□□□ 1.26
FGFR1-239ENST00000533619 KCNQ2O43526 872 aa22.89■■□□□ 1.25
FGFR1-239ENST00000533619 PHKG2P15735 406 aa22.89■■□□□ 1.25
FGFR1-239ENST00000533619 HSP90AB1P08238 724 aaKnown RBP22.88■■□□□ 1.25
FGFR1-239ENST00000533619 U2AF1L5P0DN76 240 aaPredicted RBP22.87■■□□□ 1.25
FGFR1-239ENST00000533619 PRIM1P49642 420 aaKnown RBP22.87■■□□□ 1.25
FGFR1-239ENST00000533619 U2AF1Q01081 240 aaKnown RBP eCLIP22.87■■□□□ 1.25
FGFR1-239ENST00000533619 SYTL4Q96C24 671 aaPredicted RBP22.87■■□□□ 1.25
FGFR1-239ENST00000533619 CAMKK2Q96RR4 588 aa22.87■■□□□ 1.25
FGFR1-239ENST00000533619 C1orf141Q5JVX7 400 aa22.86■■□□□ 1.25
FGFR1-239ENST00000533619 ZNF530Q6P9A1 599 aaPredicted RBP22.86■■□□□ 1.25
FGFR1-239ENST00000533619 PTF1AQ7RTS3 328 aa22.86■■□□□ 1.25
FGFR1-239ENST00000533619 FCHSD2O94868 740 aa22.85■■□□□ 1.25
FGFR1-239ENST00000533619 EZH2Q15910 746 aaKnown RBP22.85■■□□□ 1.25
FGFR1-239ENST00000533619 DOT1LQ8TEK3 1739 aa22.85■■□□□ 1.25
FGFR1-239ENST00000533619 DCAF5Q96JK2 942 aa22.83■■□□□ 1.25
FGFR1-239ENST00000533619 RGPD3A6NKT7 1758 aaPredicted RBP22.83■■□□□ 1.24
FGFR1-239ENST00000533619 RGPD4Q7Z3J3 1758 aa22.83■■□□□ 1.24
FGFR1-239ENST00000533619 BTAF1O14981 1849 aa22.82■■□□□ 1.24
FGFR1-239ENST00000533619 RSPH6AQ9H0K4 717 aa22.82■■□□□ 1.24
FGFR1-239ENST00000533619 PNNQ9H307 717 aaKnown RBP22.82■■□□□ 1.24
FGFR1-239ENST00000533619 ANP32CO43423 234 aa22.81■■□□□ 1.24
FGFR1-239ENST00000533619 AKAP4Q5JQC9 854 aa22.81■■□□□ 1.24
FGFR1-239ENST00000533619 ERVV-2B6SEH9 535 aa22.8■■□□□ 1.24
FGFR1-239ENST00000533619 PRKAR2BP31323 418 aa22.8■■□□□ 1.24
FGFR1-239ENST00000533619 MTHFSDQ2M296 383 aaKnown RBP22.8■■□□□ 1.24
FGFR1-239ENST00000533619 MPRIPQ6WCQ1 1025 aa22.8■■□□□ 1.24
FGFR1-239ENST00000533619 GAS2L2Q8NHY3 880 aa22.8■■□□□ 1.24
FGFR1-239ENST00000533619 NEFMP07197 916 aa22.79■■□□□ 1.24
FGFR1-239ENST00000533619 ITGB4P16144 1822 aa22.79■■□□□ 1.24
FGFR1-239ENST00000533619 TMOD3Q9NYL9 352 aa22.77■■□□□ 1.24
FGFR1-239ENST00000533619 TXNRD1Q16881 649 aa22.76■■□□□ 1.23
FGFR1-239ENST00000533619 NBPF14Q5TI25 921 aa22.76■■□□□ 1.23
FGFR1-239ENST00000533619 RREB1Q92766 1687 aa22.76■■□□□ 1.23
FGFR1-239ENST00000533619 TOGARAM1Q9Y4F4 1720 aa22.76■■□□□ 1.23
FGFR1-239ENST00000533619 HMGB2P26583 209 aaKnown RBP22.75■■□□□ 1.23
FGFR1-239ENST00000533619 SMARCC1Q92922 1105 aaPredicted RBP22.75■■□□□ 1.23
FGFR1-239ENST00000533619 CABP4P57796 275 aa22.74■■□□□ 1.23
FGFR1-239ENST00000533619 PROM2Q8N271 834 aa22.74■■□□□ 1.23
FGFR1-239ENST00000533619 PIGBQ92521 554 aa22.74■■□□□ 1.23
FGFR1-239ENST00000533619 PHACTR3Q96KR7 559 aa22.74■■□□□ 1.23
FGFR1-239ENST00000533619 GNAT3A8MTJ3 354 aa22.73■■□□□ 1.23
FGFR1-239ENST00000533619 WDR43Q15061 677 aaKnown RBP eCLIP22.73■■□□□ 1.23
FGFR1-239ENST00000533619 SLC27A3Q5K4L6 730 aa22.73■■□□□ 1.23
FGFR1-239ENST00000533619 SCN11AQ9UI33 1791 aa22.72■■□□□ 1.23
FGFR1-239ENST00000533619 KDM6AO15550 1401 aaPredicted RBP22.72■■□□□ 1.23
FGFR1-239ENST00000533619 NUP188Q5SRE5 1749 aa22.71■■□□□ 1.23
FGFR1-239ENST00000533619 RNMTO43148 476 aaKnown RBP22.7■■□□□ 1.22
FGFR1-239ENST00000533619 MAP3K5Q99683 1374 aa22.7■■□□□ 1.22
FGFR1-239ENST00000533619 LY75O60449 1722 aa22.7■■□□□ 1.22
FGFR1-239ENST00000533619 VIRMAQ69YN4 1812 aaKnown RBP22.69■■□□□ 1.22
FGFR1-239ENST00000533619 MAPK8IP3Q9UPT6 1336 aa22.69■■□□□ 1.22
FGFR1-239ENST00000533619 NFATC2IPQ8NCF5 419 aa22.69■■□□□ 1.22
FGFR1-239ENST00000533619 PLEKHF1Q96S99 279 aa22.69■■□□□ 1.22
FGFR1-239ENST00000533619 LGR6Q9HBX8 967 aa22.69■■□□□ 1.22
FGFR1-239ENST00000533619 PALLDQ8WX93 1383 aa22.67■■□□□ 1.22
FGFR1-239ENST00000533619 HTATSF1O43719 755 aaKnown RBP22.67■■□□□ 1.22
FGFR1-239ENST00000533619 RTF1Q92541 710 aaKnown RBP22.67■■□□□ 1.22
FGFR1-239ENST00000533619 SLC52A2Q9HAB3 445 aa22.67■■□□□ 1.22
FGFR1-239ENST00000533619 CCNL1Q9UK58 526 aaPredicted RBP22.66■■□□□ 1.22
FGFR1-239ENST00000533619 ADAMTS7Q9UKP4 1686 aa22.65■■□□□ 1.22
FGFR1-239ENST00000533619 ATG3Q9NT62 314 aa22.65■■□□□ 1.22
FGFR1-239ENST00000533619 ASAP1Q9ULH1 1129 aa22.65■■□□□ 1.22
FGFR1-239ENST00000533619 TEFQ10587 303 aa22.64■■□□□ 1.21
FGFR1-239ENST00000533619 IL17REQ8NFR9 667 aa22.64■■□□□ 1.21
FGFR1-239ENST00000533619 LRRC4BQ9NT99 713 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms