RNA–Protein interactions for RNA: ENST00000533543.5

ZNF250-209, Transcript of zinc finger protein 250, humanhuman

TSL 4

Gene ZNF250, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-209ENST00000533543 CAMKK2Q96RR4 588 aa12.85□□□□□ -0.35
ZNF250-209ENST00000533543 TNS2Q63HR2 1409 aa12.85□□□□□ -0.35
ZNF250-209ENST00000533543 KIF20BQ96Q89 1820 aa12.85□□□□□ -0.35
ZNF250-209ENST00000533543 CGNL1Q0VF96 1302 aa12.85□□□□□ -0.35
ZNF250-209ENST00000533543 PANK3Q9H999 370 aa12.84□□□□□ -0.35
ZNF250-209ENST00000533543 PEAK1Q9H792 1746 aa12.84□□□□□ -0.35
ZNF250-209ENST00000533543 PTF1AQ7RTS3 328 aa12.83□□□□□ -0.36
ZNF250-209ENST00000533543 EMILIN1Q9Y6C2 1016 aa12.83□□□□□ -0.36
ZNF250-209ENST00000533543 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
ZNF250-209ENST00000533543 HSP90AB2PQ58FF8 381 aa12.82□□□□□ -0.36
ZNF250-209ENST00000533543 FLT4P35916 1363 aa12.81□□□□□ -0.36
ZNF250-209ENST00000533543 BCL9O00512 1426 aa12.81□□□□□ -0.36
ZNF250-209ENST00000533543 NBPF6Q5VWK0 638 aa12.81□□□□□ -0.36
ZNF250-209ENST00000533543 USHBP1Q8N6Y0 703 aa12.81□□□□□ -0.36
ZNF250-209ENST00000533543 NBPF4Q96M43 638 aa12.81□□□□□ -0.36
ZNF250-209ENST00000533543 BCL11BQ9C0K0 894 aaPredicted RBP12.81□□□□□ -0.36
ZNF250-209ENST00000533543 INSRP06213 1382 aa12.81□□□□□ -0.36
ZNF250-209ENST00000533543 PARD3Q8TEW0 1356 aa12.81□□□□□ -0.36
ZNF250-209ENST00000533543 SMG6Q86US8 1419 aaKnown RBP12.8□□□□□ -0.36
ZNF250-209ENST00000533543 PPM1GO15355 546 aaPredicted RBP12.8□□□□□ -0.36
ZNF250-209ENST00000533543 KIF7Q2M1P5 1343 aa12.8□□□□□ -0.36
ZNF250-209ENST00000533543 KIF24Q5T7B8 1368 aa12.8□□□□□ -0.36
ZNF250-209ENST00000533543 FAM208AQ9UK61 1670 aaKnown RBP12.8□□□□□ -0.36
ZNF250-209ENST00000533543 PITPNM1O00562 1244 aa12.79□□□□□ -0.36
ZNF250-209ENST00000533543 TNNT2P45379 298 aaPredicted RBP12.79□□□□□ -0.36
ZNF250-209ENST00000533543 ACSBG1Q96GR2 724 aa12.79□□□□□ -0.36
ZNF250-209ENST00000533543 KCNQ2O43526 872 aa12.78□□□□□ -0.36
ZNF250-209ENST00000533543 R3HDM1Q15032 1099 aaKnown RBP12.78□□□□□ -0.36
ZNF250-209ENST00000533543 SPDYE1Q8NFV5 336 aaPredicted RBP12.78□□□□□ -0.36
ZNF250-209ENST00000533543 DDX54Q8TDD1 881 aaKnown RBP12.78□□□□□ -0.36
ZNF250-209ENST00000533543 MEGF6O75095 1541 aa12.78□□□□□ -0.36
ZNF250-209ENST00000533543 RGPD2P0DJD1 1756 aa12.77□□□□□ -0.36
ZNF250-209ENST00000533543 SBF2Q86WG5 1849 aa12.77□□□□□ -0.37
ZNF250-209ENST00000533543 POLKQ9UBT6 870 aa12.77□□□□□ -0.37
ZNF250-209ENST00000533543 PLSCR1O15162 318 aa12.76□□□□□ -0.37
ZNF250-209ENST00000533543 ZCRB1Q8TBF4 217 aaKnown RBP12.76□□□□□ -0.37
ZNF250-209ENST00000533543 KNSTRNQ9Y448 316 aa12.76□□□□□ -0.37
ZNF250-209ENST00000533543 WASHC2AQ641Q2 1341 aa12.76□□□□□ -0.37
ZNF250-209ENST00000533543 NSD2O96028 1365 aa12.76□□□□□ -0.37
ZNF250-209ENST00000533543 RAPGEF4Q8WZA2 1011 aa12.75□□□□□ -0.37
ZNF250-209ENST00000533543 RREB1Q92766 1687 aa12.75□□□□□ -0.37
ZNF250-209ENST00000533543 TATP17735 454 aaPredicted RBP12.74□□□□□ -0.37
ZNF250-209ENST00000533543 NBPF14Q5TI25 921 aa12.74□□□□□ -0.37
ZNF250-209ENST00000533543 MORC1Q86VD1 984 aa12.74□□□□□ -0.37
ZNF250-209ENST00000533543 NUP188Q5SRE5 1749 aa12.74□□□□□ -0.37
ZNF250-209ENST00000533543 PROM2Q8N271 834 aa12.73□□□□□ -0.37
ZNF250-209ENST00000533543 ANKRD26Q9UPS8 1709 aa12.73□□□□□ -0.37
ZNF250-209ENST00000533543 NHSQ6T4R5 1651 aa12.73□□□□□ -0.37
ZNF250-209ENST00000533543 KAT6BQ8WYB5 2073 aa12.73□□□□□ -0.37
ZNF250-209ENST00000533543 MAP2P11137 1827 aaKnown RBP12.72□□□□□ -0.37
ZNF250-209ENST00000533543 EIF4A2Q14240 407 aaKnown RBP12.72□□□□□ -0.37
ZNF250-209ENST00000533543 TXNRD1Q16881 649 aa12.72□□□□□ -0.37
ZNF250-209ENST00000533543 AMER1Q5JTC6 1135 aaPredicted RBP12.72□□□□□ -0.37
ZNF250-209ENST00000533543 EYA1Q99502 592 aa12.72□□□□□ -0.37
ZNF250-209ENST00000533543 ANO8Q9HCE9 1232 aaPredicted RBP12.72□□□□□ -0.37
ZNF250-209ENST00000533543 SPDYE4A6NLX3 237 aa12.71□□□□□ -0.37
ZNF250-209ENST00000533543 SYTL4Q96C24 671 aaPredicted RBP12.71□□□□□ -0.37
ZNF250-209ENST00000533543 RGPD3A6NKT7 1758 aaPredicted RBP12.71□□□□□ -0.38
ZNF250-209ENST00000533543 RGPD4Q7Z3J3 1758 aa12.71□□□□□ -0.38
ZNF250-209ENST00000533543 NCAPD2Q15021 1401 aa12.71□□□□□ -0.38
ZNF250-209ENST00000533543 PRIM1P49642 420 aaKnown RBP12.7□□□□□ -0.38
ZNF250-209ENST00000533543 SHANK3Q9BYB0 1731 aa12.7□□□□□ -0.38
ZNF250-209ENST00000533543 PCDH11XQ9BZA7 1347 aa12.69□□□□□ -0.38
ZNF250-209ENST00000533543 PCDH11YQ9BZA8 1340 aa12.69□□□□□ -0.38
ZNF250-209ENST00000533543 PER1O15534 1290 aaPredicted RBP12.69□□□□□ -0.38
ZNF250-209ENST00000533543 BTAF1O14981 1849 aa12.68□□□□□ -0.38
ZNF250-209ENST00000533543 CYP27B1O15528 508 aa12.68□□□□□ -0.38
ZNF250-209ENST00000533543 CC2D1BQ5T0F9 858 aaKnown RBP12.68□□□□□ -0.38
ZNF250-209ENST00000533543 CLEC11AQ9Y240 323 aa12.68□□□□□ -0.38
ZNF250-209ENST00000533543 CNGB1Q14028 1251 aaPredicted RBP12.67□□□□□ -0.38
ZNF250-209ENST00000533543 STK32BQ9NY57 414 aa12.67□□□□□ -0.38
ZNF250-209ENST00000533543 LRP5O75197 1615 aa12.66□□□□□ -0.38
ZNF250-209ENST00000533543 IGSF1Q8N6C5 1336 aa12.66□□□□□ -0.38
ZNF250-209ENST00000533543 DOT1LQ8TEK3 1739 aa12.66□□□□□ -0.38
ZNF250-209ENST00000533543 FXR2P51116 673 aaKnown RBP eCLIP12.66□□□□□ -0.38
ZNF250-209ENST00000533543 SPG7Q9UQ90 795 aa12.66□□□□□ -0.38
ZNF250-209ENST00000533543 SLC15A2Q16348 729 aa12.65□□□□□ -0.38
ZNF250-209ENST00000533543 PIP4P2Q8N4L2 257 aa12.65□□□□□ -0.38
ZNF250-209ENST00000533543 LRRC4BQ9NT99 713 aa12.65□□□□□ -0.38
ZNF250-209ENST00000533543 AEBP1Q8IUX7 1158 aa12.64□□□□□ -0.39
ZNF250-209ENST00000533543 PDGFDQ9GZP0 370 aaPredicted RBP12.64□□□□□ -0.39
ZNF250-209ENST00000533543 PKD1L3Q7Z443 1732 aa12.64□□□□□ -0.39
ZNF250-209ENST00000533543 IL13P35225 146 aa12.63□□□□□ -0.39
ZNF250-209ENST00000533543 MTHFSP49914 203 aa12.63□□□□□ -0.39
ZNF250-209ENST00000533543 KCNQ4P56696 695 aa12.63□□□□□ -0.39
ZNF250-209ENST00000533543 ZNF827Q17R98 1081 aa12.63□□□□□ -0.39
ZNF250-209ENST00000533543 SLC27A3Q5K4L6 730 aa12.63□□□□□ -0.39
ZNF250-209ENST00000533543 MPRIPQ6WCQ1 1025 aa12.63□□□□□ -0.39
ZNF250-209ENST00000533543 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.63□□□□□ -0.398e-6■■■□□ 14.7
ZNF250-209ENST00000533543 NPC1L1Q9UHC9 1359 aa12.62□□□□□ -0.39
ZNF250-209ENST00000533543 PHKG2P15735 406 aa12.62□□□□□ -0.39
ZNF250-209ENST00000533543 NKX1-1Q15270 411 aaPredicted RBP12.62□□□□□ -0.39
ZNF250-209ENST00000533543 IFNL2Q8IZJ0 200 aa12.62□□□□□ -0.39
ZNF250-209ENST00000533543 PAPPAQ13219 1627 aa12.62□□□□□ -0.39
ZNF250-209ENST00000533543 ZBTB7AO95365 584 aa12.61□□□□□ -0.39
ZNF250-209ENST00000533543 SULT6B1Q6IMI4 303 aa12.61□□□□□ -0.39
ZNF250-209ENST00000533543 SPON1Q9HCB6 807 aa12.61□□□□□ -0.39
ZNF250-209ENST00000533543 CCNL1Q9UK58 526 aaPredicted RBP12.61□□□□□ -0.39
ZNF250-209ENST00000533543 TOGARAM1Q9Y4F4 1720 aa12.6□□□□□ -0.39
ZNF250-209ENST00000533543 PLEKHG2Q9H7P9 1386 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms