RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 R3HDM1Q15032 1099 aaKnown RBP16.67■□□□□ 0.26
SF3B2-213ENST00000533421 NUP188Q5SRE5 1749 aa16.67■□□□□ 0.26
SF3B2-213ENST00000533421 MORC1Q86VD1 984 aa16.66■□□□□ 0.26
SF3B2-213ENST00000533421 TNNT2P45379 298 aaPredicted RBP16.65■□□□□ 0.26
SF3B2-213ENST00000533421 ACSBG1Q96GR2 724 aa16.65■□□□□ 0.26
SF3B2-213ENST00000533421 POLKQ9UBT6 870 aa16.65■□□□□ 0.26
SF3B2-213ENST00000533421 PCDH11XQ9BZA7 1347 aa16.65■□□□□ 0.26
SF3B2-213ENST00000533421 PCDH11YQ9BZA8 1340 aa16.65■□□□□ 0.26
SF3B2-213ENST00000533421 MEGF6O75095 1541 aa16.65■□□□□ 0.26
SF3B2-213ENST00000533421 KAT6BQ8WYB5 2073 aa16.65■□□□□ 0.26
SF3B2-213ENST00000533421 USHBP1Q8N6Y0 703 aa16.64■□□□□ 0.25
SF3B2-213ENST00000533421 HMGB2P26583 209 aaKnown RBP16.63■□□□□ 0.25
SF3B2-213ENST00000533421 PLEKHG2Q9H7P9 1386 aa16.63■□□□□ 0.25
SF3B2-213ENST00000533421 KCNQ2O43526 872 aa16.62■□□□□ 0.25
SF3B2-213ENST00000533421 TXNRD1Q16881 649 aa16.62■□□□□ 0.25
SF3B2-213ENST00000533421 SPG7Q9UQ90 795 aa16.62■□□□□ 0.25
SF3B2-213ENST00000533421 DDX10Q13206 875 aaKnown RBP16.61■□□□□ 0.25
SF3B2-213ENST00000533421 CC2D1BQ5T0F9 858 aaKnown RBP16.61■□□□□ 0.25
SF3B2-213ENST00000533421 SYTL4Q96C24 671 aaPredicted RBP16.61■□□□□ 0.25
SF3B2-213ENST00000533421 BTAF1O14981 1849 aa16.61■□□□□ 0.25
SF3B2-213ENST00000533421 STK32BQ9NY57 414 aa16.6■□□□□ 0.25
SF3B2-213ENST00000533421 NCAPD2Q15021 1401 aa16.6■□□□□ 0.25
SF3B2-213ENST00000533421 PER1O15534 1290 aaPredicted RBP16.59■□□□□ 0.25
SF3B2-213ENST00000533421 AMER1Q5JTC6 1135 aaPredicted RBP16.59■□□□□ 0.25
SF3B2-213ENST00000533421 PTF1AQ7RTS3 328 aa16.59■□□□□ 0.25
SF3B2-213ENST00000533421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.59■□□□□ 0.25
SF3B2-213ENST00000533421 SHANK3Q9BYB0 1731 aa16.59■□□□□ 0.25
SF3B2-213ENST00000533421 EIF4A2Q14240 407 aaKnown RBP16.58■□□□□ 0.24
SF3B2-213ENST00000533421 SLC27A3Q5K4L6 730 aa16.58■□□□□ 0.24
SF3B2-213ENST00000533421 EYA1Q99502 592 aa16.58■□□□□ 0.24
SF3B2-213ENST00000533421 DOT1LQ8TEK3 1739 aa16.58■□□□□ 0.24
SF3B2-213ENST00000533421 PKD1L3Q7Z443 1732 aa16.57■□□□□ 0.24
SF3B2-213ENST00000533421 PRIM1P49642 420 aaKnown RBP16.57■□□□□ 0.24
SF3B2-213ENST00000533421 NPC1L1Q9UHC9 1359 aa16.55■□□□□ 0.24
SF3B2-213ENST00000533421 ZNF316A6NFI3 1004 aaPredicted RBP16.55■□□□□ 0.24
SF3B2-213ENST00000533421 PROM2Q8N271 834 aa16.55■□□□□ 0.24
SF3B2-213ENST00000533421 IGSF1Q8N6C5 1336 aa16.54■□□□□ 0.24
SF3B2-213ENST00000533421 SLC15A2Q16348 729 aa16.54■□□□□ 0.24
SF3B2-213ENST00000533421 SPON1Q9HCB6 807 aa16.54■□□□□ 0.24
SF3B2-213ENST00000533421 IFNL2Q8IZJ0 200 aa16.53■□□□□ 0.24
SF3B2-213ENST00000533421 CYP27B1O15528 508 aa16.52■□□□□ 0.24
SF3B2-213ENST00000533421 HSP90AB1P08238 724 aaKnown RBP16.52■□□□□ 0.24
SF3B2-213ENST00000533421 AMOTQ4VCS5 1084 aa16.52■□□□□ 0.24
SF3B2-213ENST00000533421 ANO8Q9HCE9 1232 aaPredicted RBP16.52■□□□□ 0.24
SF3B2-213ENST00000533421 NKX1-1Q15270 411 aaPredicted RBP16.51■□□□□ 0.23
SF3B2-213ENST00000533421 PLEKHO1Q53GL0 409 aaPredicted RBP16.51■□□□□ 0.23
SF3B2-213ENST00000533421 SMARCC1Q92922 1105 aaPredicted RBP16.51■□□□□ 0.23
SF3B2-213ENST00000533421 PPP1R1BQ9UD71 204 aaPredicted RBP16.51■□□□□ 0.23
SF3B2-213ENST00000533421 LY75O60449 1722 aa16.49■□□□□ 0.23
SF3B2-213ENST00000533421 MTHFSP49914 203 aa16.49■□□□□ 0.23
SF3B2-213ENST00000533421 MPRIPQ6WCQ1 1025 aa16.49■□□□□ 0.23
SF3B2-213ENST00000533421 CCNL1Q9UK58 526 aaPredicted RBP16.49■□□□□ 0.23
SF3B2-213ENST00000533421 PAPPAQ13219 1627 aa16.48■□□□□ 0.23
SF3B2-213ENST00000533421 PHKG2P15735 406 aa16.48■□□□□ 0.23
SF3B2-213ENST00000533421 C1orf141Q5JVX7 400 aa16.48■□□□□ 0.23
SF3B2-213ENST00000533421 TMOD3Q9NYL9 352 aa16.48■□□□□ 0.23
SF3B2-213ENST00000533421 CASZ1Q86V15 1759 aa16.47■□□□□ 0.23
SF3B2-213ENST00000533421 DIAPH1O60610 1272 aaKnown RBP16.46■□□□□ 0.23
SF3B2-213ENST00000533421 IL13P35225 146 aa16.46■□□□□ 0.23
SF3B2-213ENST00000533421 SULT6B1Q6IMI4 303 aa16.46■□□□□ 0.23
SF3B2-213ENST00000533421 DCAF5Q96JK2 942 aa16.46■□□□□ 0.23
SF3B2-213ENST00000533421 MTFR1LQ9H019 292 aa16.46■□□□□ 0.23
SF3B2-213ENST00000533421 LRRC4BQ9NT99 713 aa16.46■□□□□ 0.23
SF3B2-213ENST00000533421 TFCP2L1Q9NZI6 479 aa16.46■□□□□ 0.23
SF3B2-213ENST00000533421 ITGB4P16144 1822 aa16.46■□□□□ 0.23
SF3B2-213ENST00000533421 PALLDQ8WX93 1383 aa16.46■□□□□ 0.23
SF3B2-213ENST00000533421 ZNF530Q6P9A1 599 aaPredicted RBP16.45■□□□□ 0.22
SF3B2-213ENST00000533421 CFAP53Q96M91 514 aa16.45■□□□□ 0.22
SF3B2-213ENST00000533421 KDRP35968 1356 aa16.45■□□□□ 0.22
SF3B2-213ENST00000533421 QSER1Q2KHR3 1735 aa16.45■□□□□ 0.22
SF3B2-213ENST00000533421 ERVV-2B6SEH9 535 aa16.44■□□□□ 0.22
SF3B2-213ENST00000533421 SLC16A10Q8TF71 515 aa16.44■□□□□ 0.22
SF3B2-213ENST00000533421 TOGARAM1Q9Y4F4 1720 aa16.44■□□□□ 0.22
SF3B2-213ENST00000533421 DCAF8L1A6NGE4 600 aa16.43■□□□□ 0.22
SF3B2-213ENST00000533421 ZBTB7AO95365 584 aa16.43■□□□□ 0.22
SF3B2-213ENST00000533421 AKT1S1Q96B36 256 aa16.43■□□□□ 0.22
SF3B2-213ENST00000533421 ZNF827Q17R98 1081 aa16.42■□□□□ 0.22
SF3B2-213ENST00000533421 FLAD1Q8NFF5 587 aa16.42■□□□□ 0.22
SF3B2-213ENST00000533421 PIGBQ92521 554 aa16.42■□□□□ 0.22
SF3B2-213ENST00000533421 AEBP1Q8IUX7 1158 aa16.41■□□□□ 0.22
SF3B2-213ENST00000533421 C5P01031 1676 aa16.4■□□□□ 0.22
SF3B2-213ENST00000533421 PPP2R1AP30153 589 aa16.4■□□□□ 0.22
SF3B2-213ENST00000533421 CABP4P57796 275 aa16.4■□□□□ 0.22
SF3B2-213ENST00000533421 NUDCQ9Y266 331 aa16.4■□□□□ 0.22
SF3B2-213ENST00000533421 POLD1P28340 1107 aa16.39■□□□□ 0.21
SF3B2-213ENST00000533421 AKAP4Q5JQC9 854 aa16.39■□□□□ 0.21
SF3B2-213ENST00000533421 AK7Q96M32 723 aa16.39■□□□□ 0.21
SF3B2-213ENST00000533421 ATF5Q9Y2D1 282 aaPredicted RBP16.39■□□□□ 0.21
SF3B2-213ENST00000533421 LOC102724428A0A0B4J2F2 783 aa16.38■□□□□ 0.21
SF3B2-213ENST00000533421 U2SURPO15042 1029 aaKnown RBP16.38■□□□□ 0.21
SF3B2-213ENST00000533421 KCNQ4P56696 695 aa16.38■□□□□ 0.21
SF3B2-213ENST00000533421 SIK1P57059 783 aa16.38■□□□□ 0.21
SF3B2-213ENST00000533421 COL3A1P02461 1466 aaPredicted RBP16.37■□□□□ 0.21
SF3B2-213ENST00000533421 MSH5O43196 834 aa16.37■□□□□ 0.21
SF3B2-213ENST00000533421 HMOX1P09601 288 aa16.37■□□□□ 0.21
SF3B2-213ENST00000533421 PDGFDQ9GZP0 370 aaPredicted RBP16.37■□□□□ 0.21
SF3B2-213ENST00000533421 TAF1LQ8IZX4 1826 aa16.37■□□□□ 0.21
SF3B2-213ENST00000533421 PNPLA7Q6ZV29 1317 aa16.37■□□□□ 0.21
SF3B2-213ENST00000533421 ATP6V1AP38606 617 aa16.35■□□□□ 0.21
SF3B2-213ENST00000533421 PTGER2P43116 358 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms