RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.44□□□□□ -0.26
NUP98-220ENST00000533346 PSDA5PKW4 1024 aaPredicted RBP13.43□□□□□ -0.26
NUP98-220ENST00000533346 NUP188Q5SRE5 1749 aa13.43□□□□□ -0.26
NUP98-220ENST00000533346 ZCRB1Q8TBF4 217 aaKnown RBP13.43□□□□□ -0.26
NUP98-220ENST00000533346 IGSF1Q8N6C5 1336 aa13.42□□□□□ -0.26
NUP98-220ENST00000533346 EIF4A2Q14240 407 aaKnown RBP13.42□□□□□ -0.26
NUP98-220ENST00000533346 RAPGEF4Q8WZA2 1011 aa13.42□□□□□ -0.26
NUP98-220ENST00000533346 EYA1Q99502 592 aa13.42□□□□□ -0.26
NUP98-220ENST00000533346 TATP17735 454 aaPredicted RBP13.41□□□□□ -0.26
NUP98-220ENST00000533346 EZH2Q15910 746 aaKnown RBP13.41□□□□□ -0.26
NUP98-220ENST00000533346 BTAF1O14981 1849 aa13.41□□□□□ -0.26
NUP98-220ENST00000533346 PPM1GO15355 546 aaPredicted RBP13.4□□□□□ -0.26
NUP98-220ENST00000533346 NKX1-1Q15270 411 aaPredicted RBP13.39□□□□□ -0.27
NUP98-220ENST00000533346 KDRP35968 1356 aa13.39□□□□□ -0.27
NUP98-220ENST00000533346 DOT1LQ8TEK3 1739 aa13.39□□□□□ -0.27
NUP98-220ENST00000533346 PCDH11XQ9BZA7 1347 aa13.39□□□□□ -0.27
NUP98-220ENST00000533346 PCDH11YQ9BZA8 1340 aa13.39□□□□□ -0.27
NUP98-220ENST00000533346 IL13P35225 146 aa13.38□□□□□ -0.27
NUP98-220ENST00000533346 ZEB1P37275 1124 aaPredicted RBP13.38□□□□□ -0.27
NUP98-220ENST00000533346 TNNT2P45379 298 aaPredicted RBP13.38□□□□□ -0.27
NUP98-220ENST00000533346 PTF1AQ7RTS3 328 aa13.38□□□□□ -0.27
NUP98-220ENST00000533346 USHBP1Q8N6Y0 703 aa13.38□□□□□ -0.27
NUP98-220ENST00000533346 LY75O60449 1722 aa13.37□□□□□ -0.27
NUP98-220ENST00000533346 KAT6BQ8WYB5 2073 aa13.37□□□□□ -0.27
NUP98-220ENST00000533346 KCNQ2O43526 872 aa13.37□□□□□ -0.27
NUP98-220ENST00000533346 PROM2Q8N271 834 aa13.37□□□□□ -0.27
NUP98-220ENST00000533346 DDX54Q8TDD1 881 aaKnown RBP13.37□□□□□ -0.27
NUP98-220ENST00000533346 ITGB4P16144 1822 aa13.36□□□□□ -0.27
NUP98-220ENST00000533346 CYP27B1O15528 508 aa13.36□□□□□ -0.27
NUP98-220ENST00000533346 MTHFSP49914 203 aa13.36□□□□□ -0.27
NUP98-220ENST00000533346 SPG7Q9UQ90 795 aa13.36□□□□□ -0.27
NUP98-220ENST00000533346 CC2D1BQ5T0F9 858 aaKnown RBP13.35□□□□□ -0.27
NUP98-220ENST00000533346 COL3A1P02461 1466 aaPredicted RBP13.35□□□□□ -0.27
NUP98-220ENST00000533346 TOGARAM1Q9Y4F4 1720 aa13.34□□□□□ -0.27
NUP98-220ENST00000533346 TXNRD1Q16881 649 aa13.34□□□□□ -0.27
NUP98-220ENST00000533346 NBPF14Q5TI25 921 aa13.34□□□□□ -0.27
NUP98-220ENST00000533346 PAPPAQ13219 1627 aa13.34□□□□□ -0.27
NUP98-220ENST00000533346 AMOTQ4VCS5 1084 aa13.33□□□□□ -0.28
NUP98-220ENST00000533346 IFNL2Q8IZJ0 200 aa13.33□□□□□ -0.28
NUP98-220ENST00000533346 ACSBG1Q96GR2 724 aa13.33□□□□□ -0.28
NUP98-220ENST00000533346 QSER1Q2KHR3 1735 aa13.33□□□□□ -0.28
NUP98-220ENST00000533346 HMGB2P26583 209 aaKnown RBP13.32□□□□□ -0.28
NUP98-220ENST00000533346 PRIM1P49642 420 aaKnown RBP13.32□□□□□ -0.28
NUP98-220ENST00000533346 SLC27A3Q5K4L6 730 aa13.32□□□□□ -0.28
NUP98-220ENST00000533346 DIAPH1O60610 1272 aaKnown RBP13.31□□□□□ -0.28
NUP98-220ENST00000533346 PHKG2P15735 406 aa13.31□□□□□ -0.28
NUP98-220ENST00000533346 PLEKHO1Q53GL0 409 aaPredicted RBP13.31□□□□□ -0.28
NUP98-220ENST00000533346 HSP90AB1P08238 724 aaKnown RBP13.3□□□□□ -0.28
NUP98-220ENST00000533346 R3HDM1Q15032 1099 aaKnown RBP13.3□□□□□ -0.28
NUP98-220ENST00000533346 CASZ1Q86V15 1759 aa13.3□□□□□ -0.28
NUP98-220ENST00000533346 ZNF831Q5JPB2 1677 aa13.29□□□□□ -0.28
NUP98-220ENST00000533346 PPP2R1AP30153 589 aa13.29□□□□□ -0.28
NUP98-220ENST00000533346 SULT6B1Q6IMI4 303 aa13.29□□□□□ -0.28
NUP98-220ENST00000533346 ADAMTS7Q9UKP4 1686 aa13.28□□□□□ -0.28
NUP98-220ENST00000533346 SCN11AQ9UI33 1791 aa13.28□□□□□ -0.28
NUP98-220ENST00000533346 TAF1LQ8IZX4 1826 aa13.28□□□□□ -0.28
NUP98-220ENST00000533346 ERVV-2B6SEH9 535 aa13.28□□□□□ -0.28
NUP98-220ENST00000533346 AEBP1Q8IUX7 1158 aa13.28□□□□□ -0.28
NUP98-220ENST00000533346 VIRMAQ69YN4 1812 aaKnown RBP13.27□□□□□ -0.28
NUP98-220ENST00000533346 SLC15A2Q16348 729 aa13.27□□□□□ -0.29
NUP98-220ENST00000533346 DCAF5Q96JK2 942 aa13.27□□□□□ -0.29
NUP98-220ENST00000533346 LRRC4BQ9NT99 713 aa13.27□□□□□ -0.29
NUP98-220ENST00000533346 COL24A1Q17RW2 1714 aa13.26□□□□□ -0.29
NUP98-220ENST00000533346 SMARCC1Q92922 1105 aaPredicted RBP13.26□□□□□ -0.29
NUP98-220ENST00000533346 ANO8Q9HCE9 1232 aaPredicted RBP13.26□□□□□ -0.29
NUP98-220ENST00000533346 PIGBQ92521 554 aa13.25□□□□□ -0.29
NUP98-220ENST00000533346 AKT1S1Q96B36 256 aa13.25□□□□□ -0.29
NUP98-220ENST00000533346 SYTL4Q96C24 671 aaPredicted RBP13.25□□□□□ -0.29
NUP98-220ENST00000533346 CFAP53Q96M91 514 aa13.25□□□□□ -0.29
NUP98-220ENST00000533346 KDM6AO15550 1401 aaPredicted RBP13.24□□□□□ -0.29
NUP98-220ENST00000533346 RALBP1Q15311 655 aa13.24□□□□□ -0.29
NUP98-220ENST00000533346 AKAP4Q5JQC9 854 aa13.24□□□□□ -0.29
NUP98-220ENST00000533346 STK32BQ9NY57 414 aa13.24□□□□□ -0.29
NUP98-220ENST00000533346 C5P01031 1676 aa13.24□□□□□ -0.29
NUP98-220ENST00000533346 ZNF530Q6P9A1 599 aaPredicted RBP13.23□□□□□ -0.29
NUP98-220ENST00000533346 MPRIPQ6WCQ1 1025 aa13.23□□□□□ -0.29
NUP98-220ENST00000533346 NUDCQ9Y266 331 aa13.23□□□□□ -0.29
NUP98-220ENST00000533346 CICQ96RK0 1608 aaPredicted RBP13.23□□□□□ -0.29
NUP98-220ENST00000533346 TUBGCP6Q96RT7 1819 aa13.23□□□□□ -0.29
NUP98-220ENST00000533346 PALLDQ8WX93 1383 aa13.22□□□□□ -0.29
NUP98-220ENST00000533346 C1orf141Q5JVX7 400 aa13.22□□□□□ -0.29
NUP98-220ENST00000533346 TMOD3Q9NYL9 352 aa13.22□□□□□ -0.29
NUP98-220ENST00000533346 MRC1P22897 1456 aa13.22□□□□□ -0.29
NUP98-220ENST00000533346 FCHSD2O94868 740 aa13.21□□□□□ -0.29
NUP98-220ENST00000533346 HMOX1P09601 288 aa13.21□□□□□ -0.29
NUP98-220ENST00000533346 DDX10Q13206 875 aaKnown RBP13.21□□□□□ -0.29
NUP98-220ENST00000533346 CCNL1Q9UK58 526 aaPredicted RBP13.21□□□□□ -0.29
NUP98-220ENST00000533346 MTHFSDQ2M296 383 aaKnown RBP13.2□□□□□ -0.3
NUP98-220ENST00000533346 SLC16A10Q8TF71 515 aa13.2□□□□□ -0.3
NUP98-220ENST00000533346 RSPH6AQ9H0K4 717 aa13.2□□□□□ -0.3
NUP98-220ENST00000533346 ATG3Q9NT62 314 aa13.2□□□□□ -0.3
NUP98-220ENST00000533346 C4BP0C0L5 1744 aa13.19□□□□□ -0.3
NUP98-220ENST00000533346 YY1P25490 414 aa13.19□□□□□ -0.3
NUP98-220ENST00000533346 ZNF827Q17R98 1081 aa13.19□□□□□ -0.3
NUP98-220ENST00000533346 GAS2L2Q8NHY3 880 aa13.19□□□□□ -0.3
NUP98-220ENST00000533346 COL5A3P25940 1745 aaPredicted RBP13.19□□□□□ -0.3
NUP98-220ENST00000533346 UBR3Q6ZT12 1888 aa13.19□□□□□ -0.3
NUP98-220ENST00000533346 SIPA1L3O60292 1781 aaPredicted RBP13.18□□□□□ -0.3
NUP98-220ENST00000533346 LOC102724428A0A0B4J2F2 783 aa13.18□□□□□ -0.3
NUP98-220ENST00000533346 U2SURPO15042 1029 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms