RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 RIPK4P57078 832 aa18.31■□□□□ 0.52
CAPN1-224ENST00000533129 GAS2L2Q8NHY3 880 aa18.31■□□□□ 0.52
CAPN1-224ENST00000533129 NRKQ7Z2Y5 1582 aa18.31■□□□□ 0.52
CAPN1-224ENST00000533129 TERF1P54274 439 aa18.3■□□□□ 0.52
CAPN1-224ENST00000533129 ANKRD45Q5TZF3 282 aa18.3■□□□□ 0.52
CAPN1-224ENST00000533129 KIAA1211Q6ZU35 1233 aa18.3■□□□□ 0.52
CAPN1-224ENST00000533129 ANKARQ7Z5J8 1434 aa18.3■□□□□ 0.52
CAPN1-224ENST00000533129 OFD1O75665 1012 aa18.3■□□□□ 0.52
CAPN1-224ENST00000533129 BAG4O95429 457 aaKnown RBP18.3■□□□□ 0.52
CAPN1-224ENST00000533129 FOXD4L1Q9NU39 408 aa18.3■□□□□ 0.52
CAPN1-224ENST00000533129 DDX49Q9Y6V7 483 aaKnown RBP18.3■□□□□ 0.52
CAPN1-224ENST00000533129 ZNF445P59923 1031 aa18.29■□□□□ 0.52
CAPN1-224ENST00000533129 ZBTB7BO15156 539 aaPredicted RBP18.29■□□□□ 0.52
CAPN1-224ENST00000533129 HS1BP3Q53T59 392 aa18.29■□□□□ 0.52
CAPN1-224ENST00000533129 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.29■□□□□ 0.52
CAPN1-224ENST00000533129 ACEP12821 1306 aa18.28■□□□□ 0.52
CAPN1-224ENST00000533129 CDC45O75419 566 aa18.28■□□□□ 0.52
CAPN1-224ENST00000533129 ARHGAP45Q92619 1136 aa18.28■□□□□ 0.52
CAPN1-224ENST00000533129 USP6P35125 1406 aa18.27■□□□□ 0.52
CAPN1-224ENST00000533129 PNPLA6Q8IY17 1366 aa18.27■□□□□ 0.52
CAPN1-224ENST00000533129 MSNP26038 577 aaKnown RBP18.27■□□□□ 0.52
CAPN1-224ENST00000533129 NME9Q86XW9 330 aa18.27■□□□□ 0.52
CAPN1-224ENST00000533129 RBM42Q9BTD8 480 aaKnown RBP18.27■□□□□ 0.52
CAPN1-224ENST00000533129 FMN2Q9NZ56 1722 aa18.27■□□□□ 0.52
CAPN1-224ENST00000533129 CFAP44Q96MT7 982 aa18.27■□□□□ 0.51
CAPN1-224ENST00000533129 AATKQ6ZMQ8 1374 aa18.26■□□□□ 0.51
CAPN1-224ENST00000533129 NUTM2FA1L443 756 aa18.26■□□□□ 0.51
CAPN1-224ENST00000533129 LRRC7Q96NW7 1537 aa18.26■□□□□ 0.51
CAPN1-224ENST00000533129 NUCB2P80303 420 aa18.25■□□□□ 0.51
CAPN1-224ENST00000533129 RABEP1Q15276 862 aa18.25■□□□□ 0.51
CAPN1-224ENST00000533129 COG3Q96JB2 828 aa18.25■□□□□ 0.51
CAPN1-224ENST00000533129 NWD1Q149M9 1564 aa18.25■□□□□ 0.51
CAPN1-224ENST00000533129 NALCNQ8IZF0 1738 aa18.25■□□□□ 0.51
CAPN1-224ENST00000533129 TTC21BQ7Z4L5 1316 aa18.25■□□□□ 0.51
CAPN1-224ENST00000533129 DIAPH1O60610 1272 aaKnown RBP18.25■□□□□ 0.51
CAPN1-224ENST00000533129 AK9Q5TCS8 1911 aa18.24■□□□□ 0.51
CAPN1-224ENST00000533129 CYP2E1P05181 493 aaPredicted RBP18.23■□□□□ 0.51
CAPN1-224ENST00000533129 SSH2Q76I76 1423 aa18.23■□□□□ 0.51
CAPN1-224ENST00000533129 MRPL50Q8N5N7 158 aaKnown RBP18.23■□□□□ 0.51
CAPN1-224ENST00000533129 POLKQ9UBT6 870 aa18.23■□□□□ 0.51
CAPN1-224ENST00000533129 ABCC4O15439 1325 aa18.22■□□□□ 0.51
CAPN1-224ENST00000533129 ADGRL3Q9HAR2 1447 aa18.22■□□□□ 0.51
CAPN1-224ENST00000533129 FCHSD2O94868 740 aa18.22■□□□□ 0.51
CAPN1-224ENST00000533129 CALD1Q05682 793 aaKnown RBP18.22■□□□□ 0.51
CAPN1-224ENST00000533129 SIRT2Q8IXJ6 389 aa18.22■□□□□ 0.51
CAPN1-224ENST00000533129 TTC21AQ8NDW8 1320 aa18.22■□□□□ 0.51
CAPN1-224ENST00000533129 CDK12Q9NYV4 1490 aaPredicted RBP18.21■□□□□ 0.51
CAPN1-224ENST00000533129 ZSCAN23Q3MJ62 389 aa18.21■□□□□ 0.51
CAPN1-224ENST00000533129 PDLIM2Q96JY6 352 aa18.21■□□□□ 0.51
CAPN1-224ENST00000533129 C1orf115Q9H7X2 142 aa18.21■□□□□ 0.51
CAPN1-224ENST00000533129 LMBRD1Q9NUN5 540 aa18.21■□□□□ 0.51
CAPN1-224ENST00000533129 OVOS2A0A0J9YW53 1432 aa18.21■□□□□ 0.51
CAPN1-224ENST00000533129 OVOS2Q6IE36 1432 aa18.21■□□□□ 0.51
CAPN1-224ENST00000533129 RGPD8O14715 1765 aaPredicted RBP18.2■□□□□ 0.5
CAPN1-224ENST00000533129 ZNF500O60304 480 aaPredicted RBP18.2■□□□□ 0.5
CAPN1-224ENST00000533129 MCTP1Q6DN14 999 aa18.2■□□□□ 0.5
CAPN1-224ENST00000533129 NOL7Q9UMY1 257 aaKnown RBP18.2■□□□□ 0.5
CAPN1-224ENST00000533129 ZRANB1Q9UGI0 708 aa18.2■□□□□ 0.5
CAPN1-224ENST00000533129 VAMP4O75379 141 aa18.19■□□□□ 0.5
CAPN1-224ENST00000533129 MAP2P11137 1827 aaKnown RBP18.19■□□□□ 0.5
CAPN1-224ENST00000533129 GSPT1P15170 499 aaKnown RBP18.19■□□□□ 0.5
CAPN1-224ENST00000533129 CAVIN1Q6NZI2 390 aaKnown RBP18.19■□□□□ 0.5
CAPN1-224ENST00000533129 NGDNQ8NEJ9 315 aaKnown RBP18.19■□□□□ 0.5
CAPN1-224ENST00000533129 CWC22Q9HCG8 908 aaKnown RBP18.19■□□□□ 0.5
CAPN1-224ENST00000533129 MAP7D2Q96T17 732 aa18.18■□□□□ 0.5
CAPN1-224ENST00000533129 TULP1O00294 542 aaPredicted RBP18.18■□□□□ 0.5
CAPN1-224ENST00000533129 KIF24Q5T7B8 1368 aa18.18■□□□□ 0.5
CAPN1-224ENST00000533129 PLEKHM2Q8IWE5 1019 aa18.17■□□□□ 0.5
CAPN1-224ENST00000533129 RBSNQ9H1K0 784 aa18.17■□□□□ 0.5
CAPN1-224ENST00000533129 USP31Q70CQ4 1352 aa18.16■□□□□ 0.5
CAPN1-224ENST00000533129 TTC22Q5TAA0 569 aa18.16■□□□□ 0.5
CAPN1-224ENST00000533129 USP26Q9BXU7 913 aa18.16■□□□□ 0.5
CAPN1-224ENST00000533129 EMILIN1Q9Y6C2 1016 aa18.16■□□□□ 0.5
CAPN1-224ENST00000533129 NCLP19338 710 aaKnown RBP18.15■□□□□ 0.5
CAPN1-224ENST00000533129 FBLN1P23142 703 aa18.15■□□□□ 0.5
CAPN1-224ENST00000533129 PRKAR2BP31323 418 aa18.15■□□□□ 0.5
CAPN1-224ENST00000533129 MCM5P33992 734 aa18.15■□□□□ 0.5
CAPN1-224ENST00000533129 IFT57Q9NWB7 429 aa18.15■□□□□ 0.5
CAPN1-224ENST00000533129 GNAI1P63096 354 aa18.14■□□□□ 0.5
CAPN1-224ENST00000533129 NFE2L2Q16236 605 aa18.14■□□□□ 0.5
CAPN1-224ENST00000533129 INTS3Q68E01 1043 aaKnown RBP18.14■□□□□ 0.5
CAPN1-224ENST00000533129 API5Q9BZZ5 524 aaKnown RBP18.14■□□□□ 0.49
CAPN1-224ENST00000533129 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.14■□□□□ 0.49
CAPN1-224ENST00000533129 DCTPP1Q9H773 170 aa18.13■□□□□ 0.49
CAPN1-224ENST00000533129 PRIM1P49642 420 aaKnown RBP18.13■□□□□ 0.49
CAPN1-224ENST00000533129 ST18O60284 1047 aa18.13■□□□□ 0.49
CAPN1-224ENST00000533129 CSPP1Q1MSJ5 1256 aa18.13■□□□□ 0.49
CAPN1-224ENST00000533129 TSPYL6Q8N831 410 aa18.13■□□□□ 0.49
CAPN1-224ENST00000533129 ZKSCAN5Q9Y2L8 839 aa18.13■□□□□ 0.49
CAPN1-224ENST00000533129 R3HCC1Q9Y3T6 440 aaKnown RBP18.13■□□□□ 0.49
CAPN1-224ENST00000533129 ZNF853P0CG23 659 aa18.12■□□□□ 0.49
CAPN1-224ENST00000533129 KLHL34Q8N239 644 aa18.12■□□□□ 0.49
CAPN1-224ENST00000533129 PKP1Q13835 747 aa18.12■□□□□ 0.49
CAPN1-224ENST00000533129 PHF8Q9UPP1 1060 aa18.12■□□□□ 0.49
CAPN1-224ENST00000533129 PIK3C2AO00443 1686 aa18.12■□□□□ 0.49
CAPN1-224ENST00000533129 RRS1Q15050 365 aaKnown RBP18.11■□□□□ 0.49
CAPN1-224ENST00000533129 GPT2Q8TD30 523 aa18.11■□□□□ 0.49
CAPN1-224ENST00000533129 USP54Q70EL1 1684 aa18.11■□□□□ 0.49
CAPN1-224ENST00000533129 IL13P35225 146 aa18.11■□□□□ 0.49
CAPN1-224ENST00000533129 LRSAM1Q6UWE0 723 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms