RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 NBPF14Q5TI25 921 aa17.63■□□□□ 0.41
TRAPPC4-212ENST00000533058 USHBP1Q8N6Y0 703 aa17.63■□□□□ 0.41
TRAPPC4-212ENST00000533058 RREB1Q92766 1687 aa17.62■□□□□ 0.41
TRAPPC4-212ENST00000533058 TNNT2P45379 298 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC4-212ENST00000533058 PROM2Q8N271 834 aa17.62■□□□□ 0.41
TRAPPC4-212ENST00000533058 EYA1Q99502 592 aa17.62■□□□□ 0.41
TRAPPC4-212ENST00000533058 PLEKHG2Q9H7P9 1386 aa17.62■□□□□ 0.41
TRAPPC4-212ENST00000533058 MAP2P11137 1827 aaKnown RBP17.61■□□□□ 0.41
TRAPPC4-212ENST00000533058 ACSBG1Q96GR2 724 aa17.61■□□□□ 0.41
TRAPPC4-212ENST00000533058 NPC1L1Q9UHC9 1359 aa17.61■□□□□ 0.41
TRAPPC4-212ENST00000533058 RGPD2P0DJD1 1756 aa17.61■□□□□ 0.41
TRAPPC4-212ENST00000533058 PSDA5PKW4 1024 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC4-212ENST00000533058 CNGB1Q14028 1251 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC4-212ENST00000533058 EIF4A2Q14240 407 aaKnown RBP17.6■□□□□ 0.41
TRAPPC4-212ENST00000533058 R3HDM1Q15032 1099 aaKnown RBP17.6■□□□□ 0.41
TRAPPC4-212ENST00000533058 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.6■□□□□ 0.41
TRAPPC4-212ENST00000533058 NHSQ6T4R5 1651 aa17.6■□□□□ 0.41
TRAPPC4-212ENST00000533058 PCDH11XQ9BZA7 1347 aa17.59■□□□□ 0.41
TRAPPC4-212ENST00000533058 PCDH11YQ9BZA8 1340 aa17.59■□□□□ 0.41
TRAPPC4-212ENST00000533058 DDX10Q13206 875 aaKnown RBP17.59■□□□□ 0.41
TRAPPC4-212ENST00000533058 TXNRD1Q16881 649 aa17.59■□□□□ 0.41
TRAPPC4-212ENST00000533058 NUP188Q5SRE5 1749 aa17.58■□□□□ 0.4
TRAPPC4-212ENST00000533058 IGSF1Q8N6C5 1336 aa17.57■□□□□ 0.4
TRAPPC4-212ENST00000533058 SPG7Q9UQ90 795 aa17.56■□□□□ 0.4
TRAPPC4-212ENST00000533058 SRCAPQ6ZRS2 3230 aa17.56■□□□□ 0.4
TRAPPC4-212ENST00000533058 CYP27B1O15528 508 aa17.55■□□□□ 0.4
TRAPPC4-212ENST00000533058 PRIM1P49642 420 aaKnown RBP17.55■□□□□ 0.4
TRAPPC4-212ENST00000533058 NKX1-1Q15270 411 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC4-212ENST00000533058 SHANK3Q9BYB0 1731 aa17.55■□□□□ 0.4
TRAPPC4-212ENST00000533058 SLC27A3Q5K4L6 730 aa17.53■□□□□ 0.4
TRAPPC4-212ENST00000533058 CC2D1BQ5T0F9 858 aaKnown RBP17.53■□□□□ 0.4
TRAPPC4-212ENST00000533058 LRP5O75197 1615 aa17.52■□□□□ 0.4
TRAPPC4-212ENST00000533058 IL13P35225 146 aa17.52■□□□□ 0.4
TRAPPC4-212ENST00000533058 ANO8Q9HCE9 1232 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC4-212ENST00000533058 MTHFSP49914 203 aa17.51■□□□□ 0.39
TRAPPC4-212ENST00000533058 PKD1L3Q7Z443 1732 aa17.51■□□□□ 0.39
TRAPPC4-212ENST00000533058 SYTL4Q96C24 671 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC4-212ENST00000533058 BTAF1O14981 1849 aa17.5■□□□□ 0.39
TRAPPC4-212ENST00000533058 SLC15A2Q16348 729 aa17.5■□□□□ 0.39
TRAPPC4-212ENST00000533058 IFNL2Q8IZJ0 200 aa17.5■□□□□ 0.39
TRAPPC4-212ENST00000533058 STK32BQ9NY57 414 aa17.5■□□□□ 0.39
TRAPPC4-212ENST00000533058 LRRC4BQ9NT99 713 aa17.49■□□□□ 0.39
TRAPPC4-212ENST00000533058 KDRP35968 1356 aa17.49■□□□□ 0.39
TRAPPC4-212ENST00000533058 KAT6BQ8WYB5 2073 aa17.48■□□□□ 0.39
TRAPPC4-212ENST00000533058 PHKG2P15735 406 aa17.48■□□□□ 0.39
TRAPPC4-212ENST00000533058 HMGB2P26583 209 aaKnown RBP17.48■□□□□ 0.39
TRAPPC4-212ENST00000533058 AMOTQ4VCS5 1084 aa17.48■□□□□ 0.39
TRAPPC4-212ENST00000533058 PLEKHO1Q53GL0 409 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC4-212ENST00000533058 DOT1LQ8TEK3 1739 aa17.47■□□□□ 0.39
TRAPPC4-212ENST00000533058 HSP90AB1P08238 724 aaKnown RBP17.45■□□□□ 0.38
TRAPPC4-212ENST00000533058 SULT6B1Q6IMI4 303 aa17.45■□□□□ 0.38
TRAPPC4-212ENST00000533058 SPON1Q9HCB6 807 aa17.45■□□□□ 0.38
TRAPPC4-212ENST00000533058 PAPPAQ13219 1627 aa17.45■□□□□ 0.38
TRAPPC4-212ENST00000533058 DIAPH1O60610 1272 aaKnown RBP17.44■□□□□ 0.38
TRAPPC4-212ENST00000533058 MPRIPQ6WCQ1 1025 aa17.44■□□□□ 0.38
TRAPPC4-212ENST00000533058 AEBP1Q8IUX7 1158 aa17.44■□□□□ 0.38
TRAPPC4-212ENST00000533058 SMARCC1Q92922 1105 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC4-212ENST00000533058 AKT1S1Q96B36 256 aa17.44■□□□□ 0.38
TRAPPC4-212ENST00000533058 PIGBQ92521 554 aa17.43■□□□□ 0.38
TRAPPC4-212ENST00000533058 DCAF5Q96JK2 942 aa17.43■□□□□ 0.38
TRAPPC4-212ENST00000533058 ERVV-2B6SEH9 535 aa17.42■□□□□ 0.38
TRAPPC4-212ENST00000533058 CCNL1Q9UK58 526 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC4-212ENST00000533058 LY75O60449 1722 aa17.41■□□□□ 0.38
TRAPPC4-212ENST00000533058 ZNF827Q17R98 1081 aa17.41■□□□□ 0.38
TRAPPC4-212ENST00000533058 PALLDQ8WX93 1383 aa17.4■□□□□ 0.38
TRAPPC4-212ENST00000533058 ZNF530Q6P9A1 599 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC4-212ENST00000533058 PDGFDQ9GZP0 370 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC4-212ENST00000533058 TMOD3Q9NYL9 352 aa17.4■□□□□ 0.38
TRAPPC4-212ENST00000533058 CASZ1Q86V15 1759 aa17.4■□□□□ 0.38
TRAPPC4-212ENST00000533058 TOGARAM1Q9Y4F4 1720 aa17.39■□□□□ 0.37
TRAPPC4-212ENST00000533058 COL3A1P02461 1466 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC4-212ENST00000533058 C1orf141Q5JVX7 400 aa17.38■□□□□ 0.37
TRAPPC4-212ENST00000533058 SLC16A10Q8TF71 515 aa17.38■□□□□ 0.37
TRAPPC4-212ENST00000533058 MTFR1LQ9H019 292 aa17.38■□□□□ 0.37
TRAPPC4-212ENST00000533058 KCNQ4P56696 695 aa17.37■□□□□ 0.37
TRAPPC4-212ENST00000533058 CFAP53Q96M91 514 aa17.37■□□□□ 0.37
TRAPPC4-212ENST00000533058 ITGB4P16144 1822 aa17.36■□□□□ 0.37
TRAPPC4-212ENST00000533058 PPP2R1AP30153 589 aa17.36■□□□□ 0.37
TRAPPC4-212ENST00000533058 PTGER2P43116 358 aa17.36■□□□□ 0.37
TRAPPC4-212ENST00000533058 AKAP4Q5JQC9 854 aa17.36■□□□□ 0.37
TRAPPC4-212ENST00000533058 TFCP2L1Q9NZI6 479 aa17.36■□□□□ 0.37
TRAPPC4-212ENST00000533058 ZBTB7AO95365 584 aa17.35■□□□□ 0.37
TRAPPC4-212ENST00000533058 HMOX1P09601 288 aa17.35■□□□□ 0.37
TRAPPC4-212ENST00000533058 ATG3Q9NT62 314 aa17.35■□□□□ 0.37
TRAPPC4-212ENST00000533058 ASAP1Q9ULH1 1129 aa17.35■□□□□ 0.37
TRAPPC4-212ENST00000533058 PNPLA7Q6ZV29 1317 aa17.35■□□□□ 0.37
TRAPPC4-212ENST00000533058 KDM6AO15550 1401 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC4-212ENST00000533058 LOC102724428A0A0B4J2F2 783 aa17.34■□□□□ 0.37
TRAPPC4-212ENST00000533058 SIK1P57059 783 aa17.34■□□□□ 0.37
TRAPPC4-212ENST00000533058 RALBP1Q15311 655 aa17.34■□□□□ 0.37
TRAPPC4-212ENST00000533058 SGIP1Q9BQI5 828 aa17.34■□□□□ 0.37
TRAPPC4-212ENST00000533058 CABP4P57796 275 aa17.33■□□□□ 0.36
TRAPPC4-212ENST00000533058 FLAD1Q8NFF5 587 aa17.33■□□□□ 0.36
TRAPPC4-212ENST00000533058 QSER1Q2KHR3 1735 aa17.33■□□□□ 0.36
TRAPPC4-212ENST00000533058 ANP32CO43423 234 aa17.32■□□□□ 0.36
TRAPPC4-212ENST00000533058 PPP1R1BQ9UD71 204 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC4-212ENST00000533058 NUDCQ9Y266 331 aa17.32■□□□□ 0.36
TRAPPC4-212ENST00000533058 ATF5Q9Y2D1 282 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC4-212ENST00000533058 U2SURPO15042 1029 aaKnown RBP17.31■□□□□ 0.36
TRAPPC4-212ENST00000533058 MTHFSDQ2M296 383 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms