RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 TMF1P82094 1093 aa14.24□□□□□ -0.13
CHMP4A-206ENST00000533011 FLAD1Q8NFF5 587 aa14.24□□□□□ -0.13
CHMP4A-206ENST00000533011 TMC1Q8TDI8 760 aa14.24□□□□□ -0.13
CHMP4A-206ENST00000533011 TTC21BQ7Z4L5 1316 aa14.23□□□□□ -0.13
CHMP4A-206ENST00000533011 MSH5O43196 834 aa14.23□□□□□ -0.13
CHMP4A-206ENST00000533011 CAPN15O75808 1086 aa14.23□□□□□ -0.13
CHMP4A-206ENST00000533011 SLC12A5Q9H2X9 1139 aa14.23□□□□□ -0.13
CHMP4A-206ENST00000533011 TTC21AQ8NDW8 1320 aa14.22□□□□□ -0.13
CHMP4A-206ENST00000533011 MON2Q7Z3U7 1717 aa14.22□□□□□ -0.13
CHMP4A-206ENST00000533011 HDGFL2Q7Z4V5 671 aaPredicted RBP14.22□□□□□ -0.13
CHMP4A-206ENST00000533011 KLRG1Q96E93 195 aa14.22□□□□□ -0.13
CHMP4A-206ENST00000533011 TERF2IPQ9NYB0 399 aa14.22□□□□□ -0.13
CHMP4A-206ENST00000533011 BTAF1O14981 1849 aa14.22□□□□□ -0.13
CHMP4A-206ENST00000533011 PIK3C2AO00443 1686 aa14.21□□□□□ -0.13
CHMP4A-206ENST00000533011 CD163L1Q9NR16 1453 aa14.21□□□□□ -0.13
CHMP4A-206ENST00000533011 NLRP2Q9NX02 1062 aa14.21□□□□□ -0.13
CHMP4A-206ENST00000533011 CDCA8Q53HL2 280 aa14.2□□□□□ -0.14
CHMP4A-206ENST00000533011 COL23A1Q86Y22 540 aaPredicted RBP14.2□□□□□ -0.14
CHMP4A-206ENST00000533011 KAT6BQ8WYB5 2073 aa14.19□□□□□ -0.14
CHMP4A-206ENST00000533011 RBM46Q8TBY0 533 aaKnown RBP14.19□□□□□ -0.14
CHMP4A-206ENST00000533011 SLC34A2O95436 690 aa14.18□□□□□ -0.14
CHMP4A-206ENST00000533011 FSTL1Q12841 308 aa14.18□□□□□ -0.14
CHMP4A-206ENST00000533011 A0A1W2PP64 1363 aa14.18□□□□□ -0.14
CHMP4A-206ENST00000533011 ERBB3P21860 1342 aa14.17□□□□□ -0.14
CHMP4A-206ENST00000533011 EDC4Q6P2E9 1401 aaKnown RBP14.17□□□□□ -0.14
CHMP4A-206ENST00000533011 EIF4G2P78344 907 aaKnown RBP eCLIP14.17□□□□□ -0.14
CHMP4A-206ENST00000533011 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.17□□□□□ -0.14
CHMP4A-206ENST00000533011 PCDH10Q9P2E7 1040 aa14.17□□□□□ -0.14
CHMP4A-206ENST00000533011 CCNL1Q9UK58 526 aaPredicted RBP14.17□□□□□ -0.14
CHMP4A-206ENST00000533011 USP31Q70CQ4 1352 aa14.15□□□□□ -0.14
CHMP4A-206ENST00000533011 ANKRD36BQ8N2N9 1353 aa14.15□□□□□ -0.14
CHMP4A-206ENST00000533011 PRIM1P49642 420 aaKnown RBP14.15□□□□□ -0.14
CHMP4A-206ENST00000533011 C16orf71Q8IYS4 520 aaPredicted RBP14.15□□□□□ -0.14
CHMP4A-206ENST00000533011 DDX54Q8TDD1 881 aaKnown RBP14.15□□□□□ -0.14
CHMP4A-206ENST00000533011 SOX12O15370 315 aa14.14□□□□□ -0.15
CHMP4A-206ENST00000533011 NME9Q86XW9 330 aa14.14□□□□□ -0.15
CHMP4A-206ENST00000533011 SYTL4Q96C24 671 aaPredicted RBP14.14□□□□□ -0.15
CHMP4A-206ENST00000533011 RGPD5Q99666 1765 aa14.14□□□□□ -0.15
CHMP4A-206ENST00000533011 IGSF1Q8N6C5 1336 aa14.14□□□□□ -0.15
CHMP4A-206ENST00000533011 USP54Q70EL1 1684 aa14.14□□□□□ -0.15
CHMP4A-206ENST00000533011 HSPA5P11021 654 aaKnown RBP14.13□□□□□ -0.15
CHMP4A-206ENST00000533011 KCNQ4P56696 695 aa14.13□□□□□ -0.15
CHMP4A-206ENST00000533011 MSL1Q68DK7 614 aa14.13□□□□□ -0.15
CHMP4A-206ENST00000533011 WWC3Q9ULE0 1092 aa14.13□□□□□ -0.15
CHMP4A-206ENST00000533011 ANKRD24Q8TF21 1146 aa14.12□□□□□ -0.15
CHMP4A-206ENST00000533011 NFAT5O94916 1531 aa14.1□□□□□ -0.15
CHMP4A-206ENST00000533011 WDR90Q96KV7 1748 aa14.1□□□□□ -0.15
CHMP4A-206ENST00000533011 TUBGCP6Q96RT7 1819 aa14.1□□□□□ -0.15
CHMP4A-206ENST00000533011 LY75O60449 1722 aa14.09□□□□□ -0.15
CHMP4A-206ENST00000533011 COG3Q96JB2 828 aa14.08□□□□□ -0.16
CHMP4A-206ENST00000533011 NSD3Q9BZ95 1437 aa14.07□□□□□ -0.16
CHMP4A-206ENST00000533011 TGFB2P61812 414 aa14.07□□□□□ -0.16
CHMP4A-206ENST00000533011 ZCRB1Q8TBF4 217 aaKnown RBP14.07□□□□□ -0.16
CHMP4A-206ENST00000533011 POLR3GLQ9BT43 218 aa14.07□□□□□ -0.16
CHMP4A-206ENST00000533011 NMRK2Q9NPI5 230 aa14.07□□□□□ -0.16
CHMP4A-206ENST00000533011 KDM2BQ8NHM5 1336 aa14.07□□□□□ -0.16
CHMP4A-206ENST00000533011 CICQ96RK0 1608 aaPredicted RBP14.06□□□□□ -0.16
CHMP4A-206ENST00000533011 FYB1O15117 783 aa14.06□□□□□ -0.16
CHMP4A-206ENST00000533011 NSD2O96028 1365 aa14.06□□□□□ -0.16
CHMP4A-206ENST00000533011 LTN1O94822 1766 aa14.06□□□□□ -0.16
CHMP4A-206ENST00000533011 PCNTO95613 3336 aa14.05□□□□□ -0.16
CHMP4A-206ENST00000533011 SMC1BQ8NDV3 1235 aa14.05□□□□□ -0.16
CHMP4A-206ENST00000533011 PLEKHG2Q9H7P9 1386 aa14.05□□□□□ -0.16
CHMP4A-206ENST00000533011 ARHGAP27Q6ZUM4 889 aa14.04□□□□□ -0.16
CHMP4A-206ENST00000533011 AK7Q96M32 723 aa14.04□□□□□ -0.16
CHMP4A-206ENST00000533011 CARD14Q9BXL6 1004 aa14.04□□□□□ -0.16
CHMP4A-206ENST00000533011 CGNL1Q0VF96 1302 aa14.04□□□□□ -0.16
CHMP4A-206ENST00000533011 KIF20BQ96Q89 1820 aa14.04□□□□□ -0.16
CHMP4A-206ENST00000533011 HSPA1AP0DMV8 641 aaKnown RBP14.03□□□□□ -0.16
CHMP4A-206ENST00000533011 HSPA1BP0DMV9 641 aaKnown RBP14.03□□□□□ -0.16
CHMP4A-206ENST00000533011 HTRA3P83110 453 aa14.03□□□□□ -0.16
CHMP4A-206ENST00000533011 IP6K1Q92551 441 aa14.03□□□□□ -0.16
CHMP4A-206ENST00000533011 SMARCC1Q92922 1105 aaPredicted RBP14.03□□□□□ -0.16
CHMP4A-206ENST00000533011 GGNBP2Q9H3C7 697 aa14.03□□□□□ -0.16
CHMP4A-206ENST00000533011 C10orf71Q711Q0 1435 aa14.03□□□□□ -0.16
CHMP4A-206ENST00000533011 SSFA2P28290 1259 aa14.02□□□□□ -0.17
CHMP4A-206ENST00000533011 BCS1LQ9Y276 419 aa14.01□□□□□ -0.17
CHMP4A-206ENST00000533011 MAP3K19Q56UN5 1328 aa13.99□□□□□ -0.17
CHMP4A-206ENST00000533011 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.99□□□□□ -0.17
CHMP4A-206ENST00000533011 FBLN1P23142 703 aa13.99□□□□□ -0.17
CHMP4A-206ENST00000533011 PANK3Q9H999 370 aa13.99□□□□□ -0.17
CHMP4A-206ENST00000533011 AMPHP49418 695 aa13.98□□□□□ -0.17
CHMP4A-206ENST00000533011 C9orf131Q5VYM1 1079 aa13.98□□□□□ -0.17
CHMP4A-206ENST00000533011 C5P01031 1676 aa13.98□□□□□ -0.17
CHMP4A-206ENST00000533011 PALLDQ8WX93 1383 aa13.97□□□□□ -0.17
CHMP4A-206ENST00000533011 KIF7Q2M1P5 1343 aa13.97□□□□□ -0.17
CHMP4A-206ENST00000533011 FCHSD2O94868 740 aa13.97□□□□□ -0.17
CHMP4A-206ENST00000533011 HOXC9P31274 260 aa13.97□□□□□ -0.17
CHMP4A-206ENST00000533011 NLGN1Q8N2Q7 840 aa13.97□□□□□ -0.17
CHMP4A-206ENST00000533011 RRAGCQ9HB90 399 aa13.97□□□□□ -0.17
CHMP4A-206ENST00000533011 FAM208AQ9UK61 1670 aaKnown RBP13.97□□□□□ -0.17
CHMP4A-206ENST00000533011 DOT1LQ8TEK3 1739 aa13.96□□□□□ -0.17
CHMP4A-206ENST00000533011 RRS1Q15050 365 aaKnown RBP13.96□□□□□ -0.17
CHMP4A-206ENST00000533011 RTL1A6NKG5 1358 aa13.96□□□□□ -0.18
CHMP4A-206ENST00000533011 ZC3H4Q9UPT8 1303 aaKnown RBP13.95□□□□□ -0.18
CHMP4A-206ENST00000533011 PXDNLA1KZ92 1463 aa13.95□□□□□ -0.18
CHMP4A-206ENST00000533011 A0A0G2JLW4 131 aa13.95□□□□□ -0.18
CHMP4A-206ENST00000533011 PHF14O94880 888 aa13.95□□□□□ -0.18
CHMP4A-206ENST00000533011 LTV1Q96GA3 475 aaPredicted RBP13.95□□□□□ -0.18
CHMP4A-206ENST00000533011 PRDM10Q9NQV6 1147 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms