RNA–Protein interactions for RNA: ENST00000532836.5

TTC39A-217, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 4

Gene TTC39A, Length 519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-217ENST00000532836 PRELPP51888 382 aa17.76■□□□□ 0.43
TTC39A-217ENST00000532836 ANKRD24Q8TF21 1146 aa17.76■□□□□ 0.43
TTC39A-217ENST00000532836 SYTL4Q96C24 671 aaPredicted RBP17.76■□□□□ 0.43
TTC39A-217ENST00000532836 COL13A1Q5TAT6 717 aaPredicted RBP17.75■□□□□ 0.43
TTC39A-217ENST00000532836 MSL1Q68DK7 614 aa17.74■□□□□ 0.43
TTC39A-217ENST00000532836 JMYQ8N9B5 988 aa17.74■□□□□ 0.43
TTC39A-217ENST00000532836 USP31Q70CQ4 1352 aa17.73■□□□□ 0.43
TTC39A-217ENST00000532836 IGSF1Q8N6C5 1336 aa17.72■□□□□ 0.43
TTC39A-217ENST00000532836 KTN1Q86UP2 1357 aaKnown RBP17.71■□□□□ 0.43
TTC39A-217ENST00000532836 USP47Q96K76 1375 aa17.71■□□□□ 0.43
TTC39A-217ENST00000532836 TNS4Q8IZW8 715 aa17.71■□□□□ 0.43
TTC39A-217ENST00000532836 KLRG1Q96E93 195 aa17.71■□□□□ 0.43
TTC39A-217ENST00000532836 NSD2O96028 1365 aa17.7■□□□□ 0.42
TTC39A-217ENST00000532836 CAPN15O75808 1086 aa17.7■□□□□ 0.42
TTC39A-217ENST00000532836 LTN1O94822 1766 aa17.68■□□□□ 0.42
TTC39A-217ENST00000532836 RBM46Q8TBY0 533 aaKnown RBP17.68■□□□□ 0.42
TTC39A-217ENST00000532836 USP54Q70EL1 1684 aa17.67■□□□□ 0.42
TTC39A-217ENST00000532836 WDR90Q96KV7 1748 aa17.67■□□□□ 0.42
TTC39A-217ENST00000532836 DOT1LQ8TEK3 1739 aa17.67■□□□□ 0.42
TTC39A-217ENST00000532836 FSTL1Q12841 308 aa17.66■□□□□ 0.42
TTC39A-217ENST00000532836 ZCRB1Q8TBF4 217 aaKnown RBP17.66■□□□□ 0.42
TTC39A-217ENST00000532836 IP6K1Q92551 441 aa17.66■□□□□ 0.42
TTC39A-217ENST00000532836 CICQ96RK0 1608 aaPredicted RBP17.65■□□□□ 0.42
TTC39A-217ENST00000532836 FAM208AQ9UK61 1670 aaKnown RBP17.65■□□□□ 0.42
TTC39A-217ENST00000532836 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.64■□□□□ 0.41
TTC39A-217ENST00000532836 C16orf71Q8IYS4 520 aaPredicted RBP17.63■□□□□ 0.41
TTC39A-217ENST00000532836 C5P01031 1676 aa17.63■□□□□ 0.41
TTC39A-217ENST00000532836 NSD3Q9BZ95 1437 aa17.63■□□□□ 0.41
TTC39A-217ENST00000532836 MON2Q7Z3U7 1717 aa17.62■□□□□ 0.41
TTC39A-217ENST00000532836 NME9Q86XW9 330 aa17.61■□□□□ 0.41
TTC39A-217ENST00000532836 CGNL1Q0VF96 1302 aa17.61■□□□□ 0.41
TTC39A-217ENST00000532836 TAF1LQ8IZX4 1826 aa17.61■□□□□ 0.41
TTC39A-217ENST00000532836 AK7Q96M32 723 aa17.6■□□□□ 0.41
TTC39A-217ENST00000532836 NMRK2Q9NPI5 230 aa17.6■□□□□ 0.41
TTC39A-217ENST00000532836 WWC3Q9ULE0 1092 aa17.6■□□□□ 0.41
TTC39A-217ENST00000532836 TGFB2P61812 414 aa17.59■□□□□ 0.41
TTC39A-217ENST00000532836 SBNO2Q9Y2G9 1366 aa17.58■□□□□ 0.4
TTC39A-217ENST00000532836 SMARCC1Q92922 1105 aaPredicted RBP17.58■□□□□ 0.4
TTC39A-217ENST00000532836 LTV1Q96GA3 475 aaPredicted RBP17.58■□□□□ 0.4
TTC39A-217ENST00000532836 SSFA2P28290 1259 aa17.57■□□□□ 0.4
TTC39A-217ENST00000532836 HDGFL2Q7Z4V5 671 aaPredicted RBP17.57■□□□□ 0.4
TTC39A-217ENST00000532836 PALLDQ8WX93 1383 aa17.56■□□□□ 0.4
TTC39A-217ENST00000532836 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.56■□□□□ 0.4
TTC39A-217ENST00000532836 HTRA3P83110 453 aa17.56■□□□□ 0.4
TTC39A-217ENST00000532836 ARHGAP27Q6ZUM4 889 aa17.56■□□□□ 0.4
TTC39A-217ENST00000532836 C4BP0C0L5 1744 aa17.55■□□□□ 0.4
TTC39A-217ENST00000532836 PLEKHG2Q9H7P9 1386 aa17.55■□□□□ 0.4
TTC39A-217ENST00000532836 SLC34A2O95436 690 aa17.55■□□□□ 0.4
TTC39A-217ENST00000532836 EDC4Q6P2E9 1401 aaKnown RBP17.55■□□□□ 0.4
TTC39A-217ENST00000532836 UBR3Q6ZT12 1888 aa17.54■□□□□ 0.4
TTC39A-217ENST00000532836 KDM2BQ8NHM5 1336 aa17.54■□□□□ 0.4
TTC39A-217ENST00000532836 BCS1LQ9Y276 419 aa17.54■□□□□ 0.4
TTC39A-217ENST00000532836 C10orf71Q711Q0 1435 aa17.53■□□□□ 0.4
TTC39A-217ENST00000532836 MEGF6O75095 1541 aa17.52■□□□□ 0.4
TTC39A-217ENST00000532836 KIF13BQ9NQT8 1826 aa17.52■□□□□ 0.4
TTC39A-217ENST00000532836 PHF14O94880 888 aa17.52■□□□□ 0.4
TTC39A-217ENST00000532836 HOXC9P31274 260 aa17.52■□□□□ 0.4
TTC39A-217ENST00000532836 RAPGEF4Q8WZA2 1011 aa17.52■□□□□ 0.4
TTC39A-217ENST00000532836 PCNTO95613 3336 aa17.52■□□□□ 0.39
TTC39A-217ENST00000532836 PXDNLA1KZ92 1463 aa17.51■□□□□ 0.39
TTC39A-217ENST00000532836 CD163L1Q9NR16 1453 aa17.51■□□□□ 0.39
TTC39A-217ENST00000532836 AMPHP49418 695 aa17.51■□□□□ 0.39
TTC39A-217ENST00000532836 MPRIPQ6WCQ1 1025 aa17.51■□□□□ 0.39
TTC39A-217ENST00000532836 AMIGO3Q86WK7 504 aa17.51■□□□□ 0.39
TTC39A-217ENST00000532836 SMC1BQ8NDV3 1235 aa17.51■□□□□ 0.39
TTC39A-217ENST00000532836 TERF2IPQ9NYB0 399 aa17.51■□□□□ 0.39
TTC39A-217ENST00000532836 C9orf131Q5VYM1 1079 aa17.5■□□□□ 0.39
TTC39A-217ENST00000532836 TOGARAM1Q9Y4F4 1720 aa17.5■□□□□ 0.39
TTC39A-217ENST00000532836 PCDH11XQ9BZA7 1347 aa17.49■□□□□ 0.39
TTC39A-217ENST00000532836 PCDH11YQ9BZA8 1340 aa17.49■□□□□ 0.39
TTC39A-217ENST00000532836 MMP10P09238 476 aa17.49■□□□□ 0.39
TTC39A-217ENST00000532836 HSPA1AP0DMV8 641 aaKnown RBP17.49■□□□□ 0.39
TTC39A-217ENST00000532836 HSPA1BP0DMV9 641 aaKnown RBP17.49■□□□□ 0.39
TTC39A-217ENST00000532836 TATP17735 454 aaPredicted RBP17.49■□□□□ 0.39
TTC39A-217ENST00000532836 TMC1Q8TDI8 760 aa17.49■□□□□ 0.39
TTC39A-217ENST00000532836 MAP3K19Q56UN5 1328 aa17.48■□□□□ 0.39
TTC39A-217ENST00000532836 A0A0G2JLW4 131 aa17.48■□□□□ 0.39
TTC39A-217ENST00000532836 FCHSD2O94868 740 aa17.48■□□□□ 0.39
TTC39A-217ENST00000532836 NLGN1Q8N2Q7 840 aa17.48■□□□□ 0.39
TTC39A-217ENST00000532836 RGPD2P0DJD1 1756 aa17.48■□□□□ 0.39
TTC39A-217ENST00000532836 NBPF6Q5VWK0 638 aa17.47■□□□□ 0.39
TTC39A-217ENST00000532836 NBPF4Q96M43 638 aa17.47■□□□□ 0.39
TTC39A-217ENST00000532836 N4BP2Q86UW6 1770 aaPredicted RBP17.47■□□□□ 0.39
TTC39A-217ENST00000532836 ROCK2O75116 1388 aaKnown RBP17.46■□□□□ 0.39
TTC39A-217ENST00000532836 COG3Q96JB2 828 aa17.46■□□□□ 0.39
TTC39A-217ENST00000532836 SLC12A5Q9H2X9 1139 aa17.46■□□□□ 0.39
TTC39A-217ENST00000532836 RRAGCQ9HB90 399 aa17.46■□□□□ 0.39
TTC39A-217ENST00000532836 PCDH10Q9P2E7 1040 aa17.46■□□□□ 0.39
TTC39A-217ENST00000532836 KIAA1551Q9HCM1 1747 aa17.46■□□□□ 0.39
TTC39A-217ENST00000532836 RTL1A6NKG5 1358 aa17.45■□□□□ 0.38
TTC39A-217ENST00000532836 LOC102724428A0A0B4J2F2 783 aa17.45■□□□□ 0.38
TTC39A-217ENST00000532836 SIK1P57059 783 aa17.45■□□□□ 0.38
TTC39A-217ENST00000532836 PUS7Q96PZ0 661 aaKnown RBP17.45■□□□□ 0.38
TTC39A-217ENST00000532836 CCDC87Q9NVE4 849 aa17.45■□□□□ 0.38
TTC39A-217ENST00000532836 DPEP1P16444 411 aa17.44■□□□□ 0.38
TTC39A-217ENST00000532836 TMF1P82094 1093 aa17.44■□□□□ 0.38
TTC39A-217ENST00000532836 SMIM5Q71RC9 77 aa17.44■□□□□ 0.38
TTC39A-217ENST00000532836 TNRC6CQ9HCJ0 1690 aaKnown RBP17.44■□□□□ 0.38
TTC39A-217ENST00000532836 ITGB4P16144 1822 aa17.44■□□□□ 0.38
TTC39A-217ENST00000532836 ARFGEF1Q9Y6D6 1849 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms