RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 RAI14Q9P0K7 980 aa17.58■□□□□ 0.41
PCDHA9-202ENST00000532602 ZNF219Q9P2Y4 722 aaPredicted RBP17.58■□□□□ 0.41
PCDHA9-202ENST00000532602 SYCP2Q9BX26 1530 aa17.58■□□□□ 0.4
PCDHA9-202ENST00000532602 DHX29Q7Z478 1369 aaKnown RBP17.58■□□□□ 0.4
PCDHA9-202ENST00000532602 CEP126Q9P2H0 1117 aa17.58■□□□□ 0.4
PCDHA9-202ENST00000532602 GPATCH8Q9UKJ3 1502 aaKnown RBP17.58■□□□□ 0.4
PCDHA9-202ENST00000532602 F6X3S4 739 aa17.58■□□□□ 0.4
PCDHA9-202ENST00000532602 ZPR1O75312 459 aa17.58■□□□□ 0.4
PCDHA9-202ENST00000532602 NUP133Q8WUM0 1156 aa17.58■□□□□ 0.4
PCDHA9-202ENST00000532602 TNRQ92752 1358 aa17.58■□□□□ 0.4
PCDHA9-202ENST00000532602 ATP10BO94823 1461 aa17.58■□□□□ 0.4
PCDHA9-202ENST00000532602 CHD1LQ86WJ1 897 aa17.58■□□□□ 0.4
PCDHA9-202ENST00000532602 ZSCAN29Q8IWY8 852 aaPredicted RBP17.58■□□□□ 0.4
PCDHA9-202ENST00000532602 ZNF396Q96N95 335 aaPredicted RBP17.58■□□□□ 0.4
PCDHA9-202ENST00000532602 SLFN5Q08AF3 891 aa17.57■□□□□ 0.4
PCDHA9-202ENST00000532602 RABEP1Q15276 862 aa17.57■□□□□ 0.4
PCDHA9-202ENST00000532602 EXOC6BQ9Y2D4 811 aa17.57■□□□□ 0.4
PCDHA9-202ENST00000532602 DISP3Q9P2K9 1392 aa17.57■□□□□ 0.4
PCDHA9-202ENST00000532602 KINO60870 393 aaKnown RBP17.57■□□□□ 0.4
PCDHA9-202ENST00000532602 PIBF1Q8WXW3 757 aa17.57■□□□□ 0.4
PCDHA9-202ENST00000532602 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.57■□□□□ 0.4
PCDHA9-202ENST00000532602 ANKRD1Q15327 319 aa17.57■□□□□ 0.4
PCDHA9-202ENST00000532602 ACEP12821 1306 aa17.57■□□□□ 0.4
PCDHA9-202ENST00000532602 IGHMBP2P38935 993 aaKnown RBP17.56■□□□□ 0.4
PCDHA9-202ENST00000532602 KRT18P05783 430 aaKnown RBP17.56■□□□□ 0.4
PCDHA9-202ENST00000532602 TAF7Q15545 349 aaPredicted RBP17.56■□□□□ 0.4
PCDHA9-202ENST00000532602 ZFYVE27Q5T4F4 411 aa17.56■□□□□ 0.4
PCDHA9-202ENST00000532602 LETM1O95202 739 aaPredicted RBP17.55■□□□□ 0.4
PCDHA9-202ENST00000532602 METTL24Q5JXM2 366 aa17.55■□□□□ 0.4
PCDHA9-202ENST00000532602 LRP2BPQ9P2M1 347 aa17.55■□□□□ 0.4
PCDHA9-202ENST00000532602 ZNF652Q9Y2D9 606 aa17.55■□□□□ 0.4
PCDHA9-202ENST00000532602 IDH1O75874 414 aaKnown RBP17.55■□□□□ 0.4
PCDHA9-202ENST00000532602 MBD3O95983 291 aa17.55■□□□□ 0.4
PCDHA9-202ENST00000532602 SETQ01105 290 aaPredicted RBP17.55■□□□□ 0.4
PCDHA9-202ENST00000532602 SOGA3Q5TF21 947 aa17.54■□□□□ 0.4
PCDHA9-202ENST00000532602 FAM83GA6ND36 823 aa17.54■□□□□ 0.4
PCDHA9-202ENST00000532602 ABCF2Q9UG63 623 aa17.54■□□□□ 0.4
PCDHA9-202ENST00000532602 CYP46A1Q9Y6A2 500 aa17.54■□□□□ 0.4
PCDHA9-202ENST00000532602 CCDC69A6NI79 296 aa17.54■□□□□ 0.4
PCDHA9-202ENST00000532602 FILIP1LQ4L180 1135 aa17.54■□□□□ 0.4
PCDHA9-202ENST00000532602 STK38Q15208 465 aa17.54■□□□□ 0.4
PCDHA9-202ENST00000532602 C14orf93Q9H972 538 aaKnown RBP17.54■□□□□ 0.4
PCDHA9-202ENST00000532602 TMOD2Q9NZR1 351 aa17.54■□□□□ 0.4
PCDHA9-202ENST00000532602 CTNNA3Q9UI47 895 aa17.54■□□□□ 0.4
PCDHA9-202ENST00000532602 GPTP24298 496 aa17.53■□□□□ 0.4
PCDHA9-202ENST00000532602 TDO2P48775 406 aa17.53■□□□□ 0.4
PCDHA9-202ENST00000532602 RUFY1Q96T51 708 aa17.53■□□□□ 0.4
PCDHA9-202ENST00000532602 SCAF11Q99590 1463 aaKnown RBP17.53■□□□□ 0.4
PCDHA9-202ENST00000532602 MAGEC2Q9UBF1 373 aaPredicted RBP17.53■□□□□ 0.4
PCDHA9-202ENST00000532602 ACBD3Q9H3P7 528 aa17.52■□□□□ 0.4
PCDHA9-202ENST00000532602 EXOC5O00471 708 aa17.52■□□□□ 0.4
PCDHA9-202ENST00000532602 MNS1Q8NEH6 495 aa17.52■□□□□ 0.4
PCDHA9-202ENST00000532602 ITSN2Q9NZM3 1697 aa17.52■□□□□ 0.4
PCDHA9-202ENST00000532602 IFT57Q9NWB7 429 aa17.52■□□□□ 0.4
PCDHA9-202ENST00000532602 ANKRD24Q8TF21 1146 aa17.52■□□□□ 0.39
PCDHA9-202ENST00000532602 AMOTQ4VCS5 1084 aa17.51■□□□□ 0.39
PCDHA9-202ENST00000532602 JARID2Q92833 1246 aaPredicted RBP17.51■□□□□ 0.39
PCDHA9-202ENST00000532602 ANKIB1Q9P2G1 1089 aa17.51■□□□□ 0.39
PCDHA9-202ENST00000532602 FANCIQ9NVI1 1328 aa17.51■□□□□ 0.39
PCDHA9-202ENST00000532602 SKAP1Q86WV1 359 aa17.51■□□□□ 0.39
PCDHA9-202ENST00000532602 ZBTB3Q9H5J0 574 aa17.51■□□□□ 0.39
PCDHA9-202ENST00000532602 ARGLU1Q9NWB6 273 aaPredicted RBP17.51■□□□□ 0.39
PCDHA9-202ENST00000532602 SYCP1Q15431 976 aa17.5■□□□□ 0.39
PCDHA9-202ENST00000532602 SSH1Q8WYL5 1049 aa17.5■□□□□ 0.39
PCDHA9-202ENST00000532602 RNF214Q8ND24 703 aa17.5■□□□□ 0.39
PCDHA9-202ENST00000532602 PLCH2O75038 1416 aa17.5■□□□□ 0.39
PCDHA9-202ENST00000532602 C20orf194Q5TEA3 1177 aa17.5■□□□□ 0.39
PCDHA9-202ENST00000532602 CDKL5O76039 1030 aa17.5■□□□□ 0.39
PCDHA9-202ENST00000532602 HSP90AB2PQ58FF8 381 aa17.5■□□□□ 0.39
PCDHA9-202ENST00000532602 PDILTQ8N807 584 aa17.5■□□□□ 0.39
PCDHA9-202ENST00000532602 SMARCE1Q969G3 411 aa17.5■□□□□ 0.39
PCDHA9-202ENST00000532602 ACSBG1Q96GR2 724 aa17.5■□□□□ 0.39
PCDHA9-202ENST00000532602 MPHOSPH10O00566 681 aaKnown RBP17.49■□□□□ 0.39
PCDHA9-202ENST00000532602 AEBP1Q8IUX7 1158 aa17.49■□□□□ 0.39
PCDHA9-202ENST00000532602 AK7Q96M32 723 aa17.49■□□□□ 0.39
PCDHA9-202ENST00000532602 MAP3K1Q13233 1512 aa17.49■□□□□ 0.39
PCDHA9-202ENST00000532602 FIBPO43427 364 aa17.49■□□□□ 0.39
PCDHA9-202ENST00000532602 LRPPRCP42704 1394 aaKnown RBP17.49■□□□□ 0.39
PCDHA9-202ENST00000532602 HSPA2P54652 639 aa17.49■□□□□ 0.39
PCDHA9-202ENST00000532602 PAF1Q8N7H5 531 aa17.49■□□□□ 0.39
PCDHA9-202ENST00000532602 TRMT112Q9UI30 125 aaKnown RBP17.49■□□□□ 0.39
PCDHA9-202ENST00000532602 MYO6Q9UM54 1294 aa17.49■□□□□ 0.39
PCDHA9-202ENST00000532602 NOL7Q9UMY1 257 aaKnown RBP17.49■□□□□ 0.39
PCDHA9-202ENST00000532602 WDR7Q9Y4E6 1490 aa17.49■□□□□ 0.39
PCDHA9-202ENST00000532602 PRPF40AO75400 957 aaKnown RBP17.49■□□□□ 0.39
PCDHA9-202ENST00000532602 NCKAP5LQ9HCH0 1330 aa17.49■□□□□ 0.39
PCDHA9-202ENST00000532602 UBAC1Q9BSL1 405 aa17.48■□□□□ 0.39
PCDHA9-202ENST00000532602 DMRT2Q9Y5R5 561 aa17.48■□□□□ 0.39
PCDHA9-202ENST00000532602 NUP153P49790 1475 aaKnown RBP17.48■□□□□ 0.39
PCDHA9-202ENST00000532602 RPAP2Q8IXW5 612 aaPredicted RBP17.48■□□□□ 0.39
PCDHA9-202ENST00000532602 CABLES1Q8TDN4 633 aa17.48■□□□□ 0.39
PCDHA9-202ENST00000532602 STIM1Q13586 685 aa17.48■□□□□ 0.39
PCDHA9-202ENST00000532602 JAKMIP1Q96N16 626 aaKnown RBP17.48■□□□□ 0.39
PCDHA9-202ENST00000532602 BOLA2Q9H3K6 86 aa17.48■□□□□ 0.39
PCDHA9-202ENST00000532602 LARP1Q6PKG0 1096 aaKnown RBP17.47■□□□□ 0.39
PCDHA9-202ENST00000532602 A2MP01023 1474 aa17.47■□□□□ 0.39
PCDHA9-202ENST00000532602 KRT32Q14532 448 aa17.47■□□□□ 0.39
PCDHA9-202ENST00000532602 TEX35Q5T0J7 233 aa17.47■□□□□ 0.39
PCDHA9-202ENST00000532602 ZNF287Q9HBT7 754 aa17.47■□□□□ 0.39
PCDHA9-202ENST00000532602 CAVIN1Q6NZI2 390 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms