RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 CPSF1Q10570 1443 aaKnown RBP11.93□□□□□ -0.5
NUP98-219ENST00000532475 SLIT3O75094 1523 aa11.92□□□□□ -0.5
NUP98-219ENST00000532475 KCNH5Q8NCM2 988 aa11.92□□□□□ -0.5
NUP98-219ENST00000532475 NLRP2Q9NX02 1062 aa11.92□□□□□ -0.5
NUP98-219ENST00000532475 PNPLA7Q6ZV29 1317 aa11.91□□□□□ -0.5
NUP98-219ENST00000532475 KAT6BQ8WYB5 2073 aa11.9□□□□□ -0.5
NUP98-219ENST00000532475 POLD1P28340 1107 aa11.9□□□□□ -0.5
NUP98-219ENST00000532475 SLC16A10Q8TF71 515 aa11.9□□□□□ -0.5
NUP98-219ENST00000532475 IL2RBP14784 551 aa11.89□□□□□ -0.51
NUP98-219ENST00000532475 ZNF692Q9BU19 519 aaPredicted RBP11.89□□□□□ -0.51
NUP98-219ENST00000532475 TFCP2L1Q9NZI6 479 aa11.89□□□□□ -0.51
NUP98-219ENST00000532475 CCDC7Q96M83 1385 aa11.89□□□□□ -0.51
NUP98-219ENST00000532475 MIER1Q8N108 512 aa11.88□□□□□ -0.51
NUP98-219ENST00000532475 RGPD5Q99666 1765 aa11.87□□□□□ -0.51
NUP98-219ENST00000532475 TNS2Q63HR2 1409 aa11.87□□□□□ -0.51
NUP98-219ENST00000532475 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.87□□□□□ -0.51
NUP98-219ENST00000532475 DDX54Q8TDD1 881 aaKnown RBP11.87□□□□□ -0.51
NUP98-219ENST00000532475 GRIN3BO60391 1043 aa11.86□□□□□ -0.51
NUP98-219ENST00000532475 PRIM1P49642 420 aaKnown RBP11.86□□□□□ -0.51
NUP98-219ENST00000532475 SLC27A3Q5K4L6 730 aa11.86□□□□□ -0.51
NUP98-219ENST00000532475 PIK3C2AO00443 1686 aa11.86□□□□□ -0.51
NUP98-219ENST00000532475 SHANK3Q9BYB0 1731 aa11.86□□□□□ -0.51
NUP98-219ENST00000532475 PAPPAQ13219 1627 aa11.86□□□□□ -0.51
NUP98-219ENST00000532475 ERBB3P21860 1342 aa11.86□□□□□ -0.51
NUP98-219ENST00000532475 EVC2Q86UK5 1308 aa11.86□□□□□ -0.51
NUP98-219ENST00000532475 AKAP12Q02952 1782 aa11.85□□□□□ -0.51
NUP98-219ENST00000532475 BRPF1P55201 1214 aaPredicted RBP11.85□□□□□ -0.51
NUP98-219ENST00000532475 NME9Q86XW9 330 aa11.85□□□□□ -0.51
NUP98-219ENST00000532475 COL23A1Q86Y22 540 aaPredicted RBP11.85□□□□□ -0.51
NUP98-219ENST00000532475 ANKRD24Q8TF21 1146 aa11.85□□□□□ -0.51
NUP98-219ENST00000532475 ZNF526Q8TF50 670 aaPredicted RBP11.85□□□□□ -0.51
NUP98-219ENST00000532475 SYTL4Q96C24 671 aaPredicted RBP11.85□□□□□ -0.51
NUP98-219ENST00000532475 ZBTB47Q9UFB7 747 aaPredicted RBP11.85□□□□□ -0.51
NUP98-219ENST00000532475 TTC21AQ8NDW8 1320 aa11.85□□□□□ -0.51
NUP98-219ENST00000532475 MSL1Q68DK7 614 aa11.84□□□□□ -0.51
NUP98-219ENST00000532475 GPBP1L1Q9HC44 474 aaPredicted RBP11.84□□□□□ -0.51
NUP98-219ENST00000532475 ATP10DQ9P241 1426 aa11.84□□□□□ -0.51
NUP98-219ENST00000532475 HSPA6P17066 643 aa11.83□□□□□ -0.52
NUP98-219ENST00000532475 WNK3Q9BYP7 1800 aa11.83□□□□□ -0.52
NUP98-219ENST00000532475 KTN1Q86UP2 1357 aaKnown RBP11.82□□□□□ -0.52
NUP98-219ENST00000532475 NFAT5O94916 1531 aa11.82□□□□□ -0.52
NUP98-219ENST00000532475 NHSQ6T4R5 1651 aa11.82□□□□□ -0.52
NUP98-219ENST00000532475 POLA2Q14181 598 aa11.82□□□□□ -0.52
NUP98-219ENST00000532475 LTV1Q96GA3 475 aaPredicted RBP11.82□□□□□ -0.52
NUP98-219ENST00000532475 WWC3Q9ULE0 1092 aa11.82□□□□□ -0.52
NUP98-219ENST00000532475 TRPM1Q7Z4N2 1603 aa11.82□□□□□ -0.52
NUP98-219ENST00000532475 BTAF1O14981 1849 aa11.81□□□□□ -0.52
NUP98-219ENST00000532475 GTPBP6O43824 516 aaPredicted RBP11.8□□□□□ -0.52
NUP98-219ENST00000532475 FBLN1P23142 703 aa11.8□□□□□ -0.52
NUP98-219ENST00000532475 L3MBTL2Q969R5 705 aa11.8□□□□□ -0.52
NUP98-219ENST00000532475 CCNL1Q9UK58 526 aaPredicted RBP11.8□□□□□ -0.52
NUP98-219ENST00000532475 ZBTB12Q9Y330 459 aaPredicted RBP11.8□□□□□ -0.52
NUP98-219ENST00000532475 ABCC6O95255 1503 aa11.8□□□□□ -0.52
NUP98-219ENST00000532475 USP31Q70CQ4 1352 aa11.79□□□□□ -0.52
NUP98-219ENST00000532475 KIAA1210Q9ULL0 1709 aa11.79□□□□□ -0.52
NUP98-219ENST00000532475 NKX1-1Q15270 411 aaPredicted RBP11.78□□□□□ -0.52
NUP98-219ENST00000532475 SMIM5Q71RC9 77 aa11.78□□□□□ -0.52
NUP98-219ENST00000532475 NPM2Q86SE8 214 aaKnown RBP11.78□□□□□ -0.52
NUP98-219ENST00000532475 IP6K1Q92551 441 aa11.78□□□□□ -0.52
NUP98-219ENST00000532475 SLC12A5Q9H2X9 1139 aa11.78□□□□□ -0.52
NUP98-219ENST00000532475 CD2APQ9Y5K6 639 aa11.78□□□□□ -0.52
NUP98-219ENST00000532475 NSD2O96028 1365 aa11.78□□□□□ -0.52
NUP98-219ENST00000532475 PCNTO95613 3336 aa11.77□□□□□ -0.52
NUP98-219ENST00000532475 KIF3CO14782 793 aa11.77□□□□□ -0.53
NUP98-219ENST00000532475 NEUROD2Q15784 382 aa11.77□□□□□ -0.53
NUP98-219ENST00000532475 TMC1Q8TDI8 760 aa11.77□□□□□ -0.53
NUP98-219ENST00000532475 QRICH2Q9H0J4 1663 aa11.77□□□□□ -0.53
NUP98-219ENST00000532475 ANKRD36BQ8N2N9 1353 aa11.77□□□□□ -0.53
NUP98-219ENST00000532475 SBNO2Q9Y2G9 1366 aa11.77□□□□□ -0.53
NUP98-219ENST00000532475 AMIGO3Q86WK7 504 aa11.76□□□□□ -0.53
NUP98-219ENST00000532475 DNAJC5GQ8N7S2 189 aa11.76□□□□□ -0.53
NUP98-219ENST00000532475 ZCRB1Q8TBF4 217 aaKnown RBP11.76□□□□□ -0.53
NUP98-219ENST00000532475 COL24A1Q17RW2 1714 aa11.76□□□□□ -0.53
NUP98-219ENST00000532475 ADCY9O60503 1353 aa11.76□□□□□ -0.53
NUP98-219ENST00000532475 SIN3AQ96ST3 1273 aa11.75□□□□□ -0.53
NUP98-219ENST00000532475 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.74□□□□□ -0.53
NUP98-219ENST00000532475 CD163L1Q9NR16 1453 aa11.73□□□□□ -0.53
NUP98-219ENST00000532475 RYDENQ9NUL5 291 aaKnown RBP11.73□□□□□ -0.53
NUP98-219ENST00000532475 TUBGCP6Q96RT7 1819 aa11.72□□□□□ -0.53
NUP98-219ENST00000532475 USP47Q96K76 1375 aa11.72□□□□□ -0.53
NUP98-219ENST00000532475 IGSF1Q8N6C5 1336 aa11.72□□□□□ -0.53
NUP98-219ENST00000532475 HOXC9P31274 260 aa11.72□□□□□ -0.53
NUP98-219ENST00000532475 NBPF6Q5VWK0 638 aa11.72□□□□□ -0.53
NUP98-219ENST00000532475 USHBP1Q8N6Y0 703 aa11.72□□□□□ -0.53
NUP98-219ENST00000532475 NBPF4Q96M43 638 aa11.72□□□□□ -0.53
NUP98-219ENST00000532475 ROCK2O75116 1388 aaKnown RBP11.71□□□□□ -0.53
NUP98-219ENST00000532475 MAP3K19Q56UN5 1328 aa11.71□□□□□ -0.53
NUP98-219ENST00000532475 HDGFL2Q7Z4V5 671 aaPredicted RBP11.71□□□□□ -0.53
NUP98-219ENST00000532475 RNF25Q96BH1 459 aaPredicted RBP11.71□□□□□ -0.53
NUP98-219ENST00000532475 QSER1Q2KHR3 1735 aa11.71□□□□□ -0.54
NUP98-219ENST00000532475 PHF14O94880 888 aa11.7□□□□□ -0.54
NUP98-219ENST00000532475 APLP1P51693 650 aa11.7□□□□□ -0.54
NUP98-219ENST00000532475 HTRA3P83110 453 aa11.7□□□□□ -0.54
NUP98-219ENST00000532475 TRIM26Q12899 539 aaPredicted RBP11.7□□□□□ -0.54
NUP98-219ENST00000532475 COL13A1Q5TAT6 717 aaPredicted RBP11.7□□□□□ -0.54
NUP98-219ENST00000532475 MPRIPQ6WCQ1 1025 aa11.7□□□□□ -0.54
NUP98-219ENST00000532475 FLAD1Q8NFF5 587 aa11.7□□□□□ -0.54
NUP98-219ENST00000532475 AMPHP49418 695 aa11.69□□□□□ -0.54
NUP98-219ENST00000532475 NEUROD1Q13562 356 aa11.69□□□□□ -0.54
NUP98-219ENST00000532475 MEGF6O75095 1541 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms