RNA–Protein interactions for RNA: ENST00000532392.1

CTSB-224, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-224ENST00000532392 MTHFSP49914 203 aa19.71■□□□□ 0.75
CTSB-224ENST00000532392 EZH2Q15910 746 aaKnown RBP19.71■□□□□ 0.75
CTSB-224ENST00000532392 PTF1AQ7RTS3 328 aa19.7■□□□□ 0.74
CTSB-224ENST00000532392 SBF2Q86WG5 1849 aa19.69■□□□□ 0.74
CTSB-224ENST00000532392 KCNQ2O43526 872 aa19.68■□□□□ 0.74
CTSB-224ENST00000532392 ACSBG1Q96GR2 724 aa19.68■□□□□ 0.74
CTSB-224ENST00000532392 IGSF1Q8N6C5 1336 aa19.68■□□□□ 0.74
CTSB-224ENST00000532392 PARD3Q8TEW0 1356 aa19.68■□□□□ 0.74
CTSB-224ENST00000532392 PLSCR1O15162 318 aa19.67■□□□□ 0.74
CTSB-224ENST00000532392 IL13P35225 146 aa19.66■□□□□ 0.74
CTSB-224ENST00000532392 PCDH11XQ9BZA7 1347 aa19.65■□□□□ 0.74
CTSB-224ENST00000532392 PCDH11YQ9BZA8 1340 aa19.65■□□□□ 0.74
CTSB-224ENST00000532392 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.64■□□□□ 0.73
CTSB-224ENST00000532392 SPG7Q9UQ90 795 aa19.64■□□□□ 0.73
CTSB-224ENST00000532392 SHANK3Q9BYB0 1731 aa19.62■□□□□ 0.73
CTSB-224ENST00000532392 CYP27B1O15528 508 aa19.62■□□□□ 0.73
CTSB-224ENST00000532392 PRIM1P49642 420 aaKnown RBP19.61■□□□□ 0.73
CTSB-224ENST00000532392 NHSQ6T4R5 1651 aa19.61■□□□□ 0.73
CTSB-224ENST00000532392 KAT6BQ8WYB5 2073 aa19.61■□□□□ 0.73
CTSB-224ENST00000532392 PLEKHG2Q9H7P9 1386 aa19.6■□□□□ 0.73
CTSB-224ENST00000532392 DIAPH1O60610 1272 aaKnown RBP19.6■□□□□ 0.73
CTSB-224ENST00000532392 SULT6B1Q6IMI4 303 aa19.6■□□□□ 0.73
CTSB-224ENST00000532392 SYTL4Q96C24 671 aaPredicted RBP19.6■□□□□ 0.73
CTSB-224ENST00000532392 DDX10Q13206 875 aaKnown RBP19.59■□□□□ 0.73
CTSB-224ENST00000532392 AEBP1Q8IUX7 1158 aa19.59■□□□□ 0.73
CTSB-224ENST00000532392 PROM2Q8N271 834 aa19.59■□□□□ 0.73
CTSB-224ENST00000532392 PPP2R1AP30153 589 aa19.58■□□□□ 0.72
CTSB-224ENST00000532392 NKX1-1Q15270 411 aaPredicted RBP19.58■□□□□ 0.72
CTSB-224ENST00000532392 PKD1L3Q7Z443 1732 aa19.58■□□□□ 0.72
CTSB-224ENST00000532392 TXNRD1Q16881 649 aa19.57■□□□□ 0.72
CTSB-224ENST00000532392 PLEKHO1Q53GL0 409 aaPredicted RBP19.57■□□□□ 0.72
CTSB-224ENST00000532392 NBPF14Q5TI25 921 aa19.57■□□□□ 0.72
CTSB-224ENST00000532392 IFNL2Q8IZJ0 200 aa19.57■□□□□ 0.72
CTSB-224ENST00000532392 RGPD3A6NKT7 1758 aaPredicted RBP19.57■□□□□ 0.72
CTSB-224ENST00000532392 RGPD4Q7Z3J3 1758 aa19.57■□□□□ 0.72
CTSB-224ENST00000532392 KDRP35968 1356 aa19.57■□□□□ 0.72
CTSB-224ENST00000532392 RREB1Q92766 1687 aa19.56■□□□□ 0.72
CTSB-224ENST00000532392 PHKG2P15735 406 aa19.56■□□□□ 0.72
CTSB-224ENST00000532392 AMOTQ4VCS5 1084 aa19.56■□□□□ 0.72
CTSB-224ENST00000532392 CFAP53Q96M91 514 aa19.56■□□□□ 0.72
CTSB-224ENST00000532392 PSDA5PKW4 1024 aaPredicted RBP19.55■□□□□ 0.72
CTSB-224ENST00000532392 R3HDM1Q15032 1099 aaKnown RBP19.55■□□□□ 0.72
CTSB-224ENST00000532392 COL3A1P02461 1466 aaPredicted RBP19.54■□□□□ 0.72
CTSB-224ENST00000532392 DOT1LQ8TEK3 1739 aa19.54■□□□□ 0.72
CTSB-224ENST00000532392 BTAF1O14981 1849 aa19.53■□□□□ 0.72
CTSB-224ENST00000532392 HMOX1P09601 288 aa19.53■□□□□ 0.72
CTSB-224ENST00000532392 NUP188Q5SRE5 1749 aa19.53■□□□□ 0.72
CTSB-224ENST00000532392 U2SURPO15042 1029 aaKnown RBP19.52■□□□□ 0.72
CTSB-224ENST00000532392 ZNF530Q6P9A1 599 aaPredicted RBP19.52■□□□□ 0.72
CTSB-224ENST00000532392 HSP90AB1P08238 724 aaKnown RBP19.51■□□□□ 0.71
CTSB-224ENST00000532392 MPRIPQ6WCQ1 1025 aa19.51■□□□□ 0.71
CTSB-224ENST00000532392 C1orf141Q5JVX7 400 aa19.49■□□□□ 0.71
CTSB-224ENST00000532392 SLC27A3Q5K4L6 730 aa19.49■□□□□ 0.71
CTSB-224ENST00000532392 DCAF5Q96JK2 942 aa19.49■□□□□ 0.71
CTSB-224ENST00000532392 NUDCQ9Y266 331 aa19.49■□□□□ 0.71
CTSB-224ENST00000532392 RALBP1Q15311 655 aa19.48■□□□□ 0.71
CTSB-224ENST00000532392 PIGBQ92521 554 aa19.48■□□□□ 0.71
CTSB-224ENST00000532392 ANO8Q9HCE9 1232 aaPredicted RBP19.48■□□□□ 0.71
CTSB-224ENST00000532392 LRRC4BQ9NT99 713 aa19.48■□□□□ 0.71
CTSB-224ENST00000532392 TMOD3Q9NYL9 352 aa19.47■□□□□ 0.71
CTSB-224ENST00000532392 TOGARAM1Q9Y4F4 1720 aa19.46■□□□□ 0.71
CTSB-224ENST00000532392 ERVV-2B6SEH9 535 aa19.46■□□□□ 0.71
CTSB-224ENST00000532392 STK32BQ9NY57 414 aa19.46■□□□□ 0.71
CTSB-224ENST00000532392 AKAP4Q5JQC9 854 aa19.45■□□□□ 0.7
CTSB-224ENST00000532392 SMARCC1Q92922 1105 aaPredicted RBP19.45■□□□□ 0.7
CTSB-224ENST00000532392 SLC15A2Q16348 729 aa19.44■□□□□ 0.7
CTSB-224ENST00000532392 CCNL1Q9UK58 526 aaPredicted RBP19.44■□□□□ 0.7
CTSB-224ENST00000532392 PALLDQ8WX93 1383 aa19.44■□□□□ 0.7
CTSB-224ENST00000532392 ZNF316A6NFI3 1004 aaPredicted RBP19.43■□□□□ 0.7
CTSB-224ENST00000532392 U2AF1L5P0DN76 240 aaPredicted RBP19.43■□□□□ 0.7
CTSB-224ENST00000532392 KCNQ4P56696 695 aa19.43■□□□□ 0.7
CTSB-224ENST00000532392 U2AF1Q01081 240 aaKnown RBP eCLIP19.43■□□□□ 0.7
CTSB-224ENST00000532392 MTHFSDQ2M296 383 aaKnown RBP19.43■□□□□ 0.7
CTSB-224ENST00000532392 ITGB4P16144 1822 aa19.43■□□□□ 0.7
CTSB-224ENST00000532392 KDM6AO15550 1401 aaPredicted RBP19.42■□□□□ 0.7
CTSB-224ENST00000532392 CABP4P57796 275 aa19.42■□□□□ 0.7
CTSB-224ENST00000532392 RSPH6AQ9H0K4 717 aa19.41■□□□□ 0.7
CTSB-224ENST00000532392 ASAP1Q9ULH1 1129 aa19.41■□□□□ 0.7
CTSB-224ENST00000532392 LY75O60449 1722 aa19.4■□□□□ 0.7
CTSB-224ENST00000532392 FCHSD2O94868 740 aa19.4■□□□□ 0.7
CTSB-224ENST00000532392 PRKAR2BP31323 418 aa19.4■□□□□ 0.7
CTSB-224ENST00000532392 ATG3Q9NT62 314 aa19.4■□□□□ 0.7
CTSB-224ENST00000532392 HMGB2P26583 209 aaKnown RBP19.39■□□□□ 0.69
CTSB-224ENST00000532392 ZNF827Q17R98 1081 aa19.39■□□□□ 0.69
CTSB-224ENST00000532392 GAS2L2Q8NHY3 880 aa19.39■□□□□ 0.69
CTSB-224ENST00000532392 AKT1S1Q96B36 256 aa19.39■□□□□ 0.69
CTSB-224ENST00000532392 MYBBP1AQ9BQG0 1328 aaKnown RBP19.39■□□□□ 0.69
CTSB-224ENST00000532392 PAPPAQ13219 1627 aa19.39■□□□□ 0.69
CTSB-224ENST00000532392 RNMTO43148 476 aaKnown RBP19.38■□□□□ 0.69
CTSB-224ENST00000532392 NFATC2IPQ8NCF5 419 aa19.38■□□□□ 0.69
CTSB-224ENST00000532392 LGR6Q9HBX8 967 aa19.38■□□□□ 0.69
CTSB-224ENST00000532392 SRCAPQ6ZRS2 3230 aa19.38■□□□□ 0.69
CTSB-224ENST00000532392 LOC102724428A0A0B4J2F2 783 aa19.37■□□□□ 0.69
CTSB-224ENST00000532392 SIK1P57059 783 aa19.37■□□□□ 0.69
CTSB-224ENST00000532392 PHACTR3Q96KR7 559 aa19.37■□□□□ 0.69
CTSB-224ENST00000532392 PDGFDQ9GZP0 370 aaPredicted RBP19.36■□□□□ 0.69
CTSB-224ENST00000532392 PRKRIP1Q9H875 184 aaPredicted RBP19.36■□□□□ 0.69
CTSB-224ENST00000532392 GNAT3A8MTJ3 354 aa19.35■□□□□ 0.69
CTSB-224ENST00000532392 SLC52A2Q9HAB3 445 aa19.35■□□□□ 0.69
CTSB-224ENST00000532392 TFCP2L1Q9NZI6 479 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms