RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 NPC1L1Q9UHC9 1359 aa23.68■■□□□ 1.38
CTSB-223ENST00000532370 RGPD1P0DJD0 1748 aa23.68■■□□□ 1.38
CTSB-223ENST00000532370 MAP2P11137 1827 aaKnown RBP23.68■■□□□ 1.38
CTSB-223ENST00000532370 TNS1Q9HBL0 1735 aaKnown RBP23.67■■□□□ 1.38
CTSB-223ENST00000532370 NCAPD2Q15021 1401 aa23.67■■□□□ 1.38
CTSB-223ENST00000532370 IGSF1Q8N6C5 1336 aa23.64■■□□□ 1.38
CTSB-223ENST00000532370 IL13P35225 146 aa23.64■■□□□ 1.37
CTSB-223ENST00000532370 PLSCR1O15162 318 aa23.63■■□□□ 1.37
CTSB-223ENST00000532370 CYP27B1O15528 508 aa23.62■■□□□ 1.37
CTSB-223ENST00000532370 AEBP1Q8IUX7 1158 aa23.62■■□□□ 1.37
CTSB-223ENST00000532370 PARD3Q8TEW0 1356 aa23.62■■□□□ 1.37
CTSB-223ENST00000532370 ZEB1P37275 1124 aaPredicted RBP23.61■■□□□ 1.37
CTSB-223ENST00000532370 PRIM1P49642 420 aaKnown RBP23.61■■□□□ 1.37
CTSB-223ENST00000532370 PROM2Q8N271 834 aa23.61■■□□□ 1.37
CTSB-223ENST00000532370 PCDH11XQ9BZA7 1347 aa23.6■■□□□ 1.37
CTSB-223ENST00000532370 PCDH11YQ9BZA8 1340 aa23.6■■□□□ 1.37
CTSB-223ENST00000532370 PSDA5PKW4 1024 aaPredicted RBP23.6■■□□□ 1.37
CTSB-223ENST00000532370 SYTL4Q96C24 671 aaPredicted RBP23.6■■□□□ 1.37
CTSB-223ENST00000532370 SULT6B1Q6IMI4 303 aa23.58■■□□□ 1.37
CTSB-223ENST00000532370 SPG7Q9UQ90 795 aa23.58■■□□□ 1.37
CTSB-223ENST00000532370 R3HDM1Q15032 1099 aaKnown RBP23.57■■□□□ 1.36
CTSB-223ENST00000532370 SBF2Q86WG5 1849 aa23.56■■□□□ 1.36
CTSB-223ENST00000532370 DDX10Q13206 875 aaKnown RBP23.56■■□□□ 1.36
CTSB-223ENST00000532370 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.56■■□□□ 1.36
CTSB-223ENST00000532370 DIAPH1O60610 1272 aaKnown RBP23.55■■□□□ 1.36
CTSB-223ENST00000532370 TXNRD1Q16881 649 aa23.55■■□□□ 1.36
CTSB-223ENST00000532370 SHANK3Q9BYB0 1731 aa23.53■■□□□ 1.36
CTSB-223ENST00000532370 PPP2R1AP30153 589 aa23.53■■□□□ 1.36
CTSB-223ENST00000532370 PHKG2P15735 406 aa23.52■■□□□ 1.36
CTSB-223ENST00000532370 NKX1-1Q15270 411 aaPredicted RBP23.52■■□□□ 1.36
CTSB-223ENST00000532370 NHSQ6T4R5 1651 aa23.51■■□□□ 1.35
CTSB-223ENST00000532370 HMOX1P09601 288 aa23.51■■□□□ 1.35
CTSB-223ENST00000532370 NBPF14Q5TI25 921 aa23.51■■□□□ 1.35
CTSB-223ENST00000532370 ANO8Q9HCE9 1232 aaPredicted RBP23.51■■□□□ 1.35
CTSB-223ENST00000532370 PLEKHO1Q53GL0 409 aaPredicted RBP23.5■■□□□ 1.35
CTSB-223ENST00000532370 IFNL2Q8IZJ0 200 aa23.5■■□□□ 1.35
CTSB-223ENST00000532370 KDRP35968 1356 aa23.5■■□□□ 1.35
CTSB-223ENST00000532370 MPRIPQ6WCQ1 1025 aa23.49■■□□□ 1.35
CTSB-223ENST00000532370 COL3A1P02461 1466 aaPredicted RBP23.49■■□□□ 1.35
CTSB-223ENST00000532370 LRRC4BQ9NT99 713 aa23.48■■□□□ 1.35
CTSB-223ENST00000532370 U2SURPO15042 1029 aaKnown RBP23.47■■□□□ 1.35
CTSB-223ENST00000532370 KCNQ4P56696 695 aa23.47■■□□□ 1.35
CTSB-223ENST00000532370 AMOTQ4VCS5 1084 aa23.47■■□□□ 1.35
CTSB-223ENST00000532370 ZNF530Q6P9A1 599 aaPredicted RBP23.47■■□□□ 1.35
CTSB-223ENST00000532370 PKD1L3Q7Z443 1732 aa23.46■■□□□ 1.35
CTSB-223ENST00000532370 RREB1Q92766 1687 aa23.46■■□□□ 1.35
CTSB-223ENST00000532370 PLEKHG2Q9H7P9 1386 aa23.45■■□□□ 1.34
CTSB-223ENST00000532370 PIGBQ92521 554 aa23.45■■□□□ 1.34
CTSB-223ENST00000532370 CFAP53Q96M91 514 aa23.44■■□□□ 1.34
CTSB-223ENST00000532370 NUP188Q5SRE5 1749 aa23.44■■□□□ 1.34
CTSB-223ENST00000532370 DOT1LQ8TEK3 1739 aa23.43■■□□□ 1.34
CTSB-223ENST00000532370 KAT6BQ8WYB5 2073 aa23.43■■□□□ 1.34
CTSB-223ENST00000532370 BTAF1O14981 1849 aa23.43■■□□□ 1.34
CTSB-223ENST00000532370 RGPD3A6NKT7 1758 aaPredicted RBP23.41■■□□□ 1.34
CTSB-223ENST00000532370 RGPD4Q7Z3J3 1758 aa23.41■■□□□ 1.34
CTSB-223ENST00000532370 C1orf141Q5JVX7 400 aa23.4■■□□□ 1.34
CTSB-223ENST00000532370 SLC27A3Q5K4L6 730 aa23.4■■□□□ 1.34
CTSB-223ENST00000532370 DCAF5Q96JK2 942 aa23.4■■□□□ 1.34
CTSB-223ENST00000532370 PDGFDQ9GZP0 370 aaPredicted RBP23.4■■□□□ 1.34
CTSB-223ENST00000532370 STK32BQ9NY57 414 aa23.4■■□□□ 1.34
CTSB-223ENST00000532370 TMOD3Q9NYL9 352 aa23.4■■□□□ 1.34
CTSB-223ENST00000532370 HSP90AB1P08238 724 aaKnown RBP23.39■■□□□ 1.33
CTSB-223ENST00000532370 SLC15A2Q16348 729 aa23.39■■□□□ 1.33
CTSB-223ENST00000532370 MTHFSDQ2M296 383 aaKnown RBP23.39■■□□□ 1.33
CTSB-223ENST00000532370 ZNF827Q17R98 1081 aa23.38■■□□□ 1.33
CTSB-223ENST00000532370 CCNL1Q9UK58 526 aaPredicted RBP23.38■■□□□ 1.33
CTSB-223ENST00000532370 ASAP1Q9ULH1 1129 aa23.38■■□□□ 1.33
CTSB-223ENST00000532370 KDM6AO15550 1401 aaPredicted RBP23.38■■□□□ 1.33
CTSB-223ENST00000532370 TOGARAM1Q9Y4F4 1720 aa23.37■■□□□ 1.33
CTSB-223ENST00000532370 PALLDQ8WX93 1383 aa23.37■■□□□ 1.33
CTSB-223ENST00000532370 ERVV-2B6SEH9 535 aa23.36■■□□□ 1.33
CTSB-223ENST00000532370 NUDCQ9Y266 331 aa23.36■■□□□ 1.33
CTSB-223ENST00000532370 U2AF1L5P0DN76 240 aaPredicted RBP23.35■■□□□ 1.33
CTSB-223ENST00000532370 U2AF1Q01081 240 aaKnown RBP eCLIP23.35■■□□□ 1.33
CTSB-223ENST00000532370 RALBP1Q15311 655 aa23.35■■□□□ 1.33
CTSB-223ENST00000532370 AKAP4Q5JQC9 854 aa23.35■■□□□ 1.33
CTSB-223ENST00000532370 AKT1S1Q96B36 256 aa23.35■■□□□ 1.33
CTSB-223ENST00000532370 SMARCC1Q92922 1105 aaPredicted RBP23.34■■□□□ 1.33
CTSB-223ENST00000532370 PHACTR3Q96KR7 559 aa23.34■■□□□ 1.33
CTSB-223ENST00000532370 RSPH6AQ9H0K4 717 aa23.34■■□□□ 1.33
CTSB-223ENST00000532370 LGR6Q9HBX8 967 aa23.34■■□□□ 1.33
CTSB-223ENST00000532370 ATG3Q9NT62 314 aa23.34■■□□□ 1.33
CTSB-223ENST00000532370 PRKAR2BP31323 418 aa23.33■■□□□ 1.33
CTSB-223ENST00000532370 CABP4P57796 275 aa23.33■■□□□ 1.33
CTSB-223ENST00000532370 NFATC2IPQ8NCF5 419 aa23.31■■□□□ 1.32
CTSB-223ENST00000532370 ZNF316A6NFI3 1004 aaPredicted RBP23.3■■□□□ 1.32
CTSB-223ENST00000532370 PAPPAQ13219 1627 aa23.3■■□□□ 1.32
CTSB-223ENST00000532370 LOC102724428A0A0B4J2F2 783 aa23.29■■□□□ 1.32
CTSB-223ENST00000532370 RNMTO43148 476 aaKnown RBP23.29■■□□□ 1.32
CTSB-223ENST00000532370 ZBTB7AO95365 584 aa23.29■■□□□ 1.32
CTSB-223ENST00000532370 SIK1P57059 783 aa23.29■■□□□ 1.32
CTSB-223ENST00000532370 FCHSD2O94868 740 aa23.28■■□□□ 1.32
CTSB-223ENST00000532370 TFCP2L1Q9NZI6 479 aa23.28■■□□□ 1.32
CTSB-223ENST00000532370 GAS2L2Q8NHY3 880 aa23.27■■□□□ 1.32
CTSB-223ENST00000532370 SLC4A9Q96Q91 983 aa23.26■■□□□ 1.31
CTSB-223ENST00000532370 SLC52A2Q9HAB3 445 aa23.26■■□□□ 1.31
CTSB-223ENST00000532370 MYBBP1AQ9BQG0 1328 aaKnown RBP23.26■■□□□ 1.31
CTSB-223ENST00000532370 ITGB4P16144 1822 aa23.26■■□□□ 1.31
CTSB-223ENST00000532370 ITPK1Q13572 414 aa23.25■■□□□ 1.31
CTSB-223ENST00000532370 RBM42Q9BTD8 480 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms