RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ZC3H6P61129 1189 aaKnown RBP8□□□□□ -1.13
HMGB1P42-201ENST00000532126 RBM6P78332 1123 aaKnown RBP8□□□□□ -1.13
HMGB1P42-201ENST00000532126 UNC5CLQ8IV45 518 aa8□□□□□ -1.13
HMGB1P42-201ENST00000532126 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8□□□□□ -1.13
HMGB1P42-201ENST00000532126 KIF12Q96FN5 646 aa8□□□□□ -1.13
HMGB1P42-201ENST00000532126 PRDM11Q9NQV5 511 aa8□□□□□ -1.13
HMGB1P42-201ENST00000532126 USP19O94966 1318 aa8□□□□□ -1.13
HMGB1P42-201ENST00000532126 BCL9LQ86UU0 1499 aa8□□□□□ -1.13
HMGB1P42-201ENST00000532126 SLIT2O94813 1529 aa7.99□□□□□ -1.13
HMGB1P42-201ENST00000532126 GCP02774 474 aa7.99□□□□□ -1.13
HMGB1P42-201ENST00000532126 CHRDL2Q6WN34 429 aa7.99□□□□□ -1.13
HMGB1P42-201ENST00000532126 AEBP1Q8IUX7 1158 aa7.99□□□□□ -1.13
HMGB1P42-201ENST00000532126 RGS22Q8NE09 1264 aa7.99□□□□□ -1.13
HMGB1P42-201ENST00000532126 CRISPLD2Q9H0B8 497 aa7.99□□□□□ -1.13
HMGB1P42-201ENST00000532126 BTG4Q9NY30 223 aa7.99□□□□□ -1.13
HMGB1P42-201ENST00000532126 SERPINA10Q9UK55 444 aa7.99□□□□□ -1.13
HMGB1P42-201ENST00000532126 CD163L1Q9NR16 1453 aa7.99□□□□□ -1.13
HMGB1P42-201ENST00000532126 A0A1W2PP64 1363 aa7.98□□□□□ -1.13
HMGB1P42-201ENST00000532126 KIAA0232Q92628 1395 aa7.98□□□□□ -1.13
HMGB1P42-201ENST00000532126 ATRNO75882 1429 aa7.98□□□□□ -1.13
HMGB1P42-201ENST00000532126 CHRNA2Q15822 529 aa7.98□□□□□ -1.13
HMGB1P42-201ENST00000532126 KCNH5Q8NCM2 988 aa7.98□□□□□ -1.13
HMGB1P42-201ENST00000532126 CCDC97Q96F63 343 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P42-201ENST00000532126 GJD4Q96KN9 370 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P42-201ENST00000532126 POLR3GLQ9BT43 218 aa7.98□□□□□ -1.13
HMGB1P42-201ENST00000532126 FAM117AQ9C073 453 aa7.98□□□□□ -1.13
HMGB1P42-201ENST00000532126 GOPCQ9HD26 462 aa7.98□□□□□ -1.13
HMGB1P42-201ENST00000532126 ANKRD36BQ8N2N9 1353 aa7.97□□□□□ -1.13
HMGB1P42-201ENST00000532126 EDC4Q6P2E9 1401 aaKnown RBP7.97□□□□□ -1.13
HMGB1P42-201ENST00000532126 VPS72Q15906 364 aa7.97□□□□□ -1.13
HMGB1P42-201ENST00000532126 NME9Q86XW9 330 aa7.97□□□□□ -1.13
HMGB1P42-201ENST00000532126 ABCA3Q99758 1704 aa7.97□□□□□ -1.13
HMGB1P42-201ENST00000532126 CPDO75976 1380 aa7.97□□□□□ -1.13
HMGB1P42-201ENST00000532126 CDK12Q9NYV4 1490 aaPredicted RBP7.96□□□□□ -1.13
HMGB1P42-201ENST00000532126 MARF1Q9Y4F3 1742 aaKnown RBP7.96□□□□□ -1.14
HMGB1P42-201ENST00000532126 EVA1CP58658 441 aa7.96□□□□□ -1.14
HMGB1P42-201ENST00000532126 GOLGA2Q08379 1002 aa7.96□□□□□ -1.14
HMGB1P42-201ENST00000532126 CAMK2BQ13554 666 aa7.96□□□□□ -1.14
HMGB1P42-201ENST00000532126 MS4A4AQ96JQ5 239 aa7.96□□□□□ -1.14
HMGB1P42-201ENST00000532126 STRN4Q9NRL3 753 aa7.96□□□□□ -1.14
HMGB1P42-201ENST00000532126 ZRANB1Q9UGI0 708 aa7.96□□□□□ -1.14
HMGB1P42-201ENST00000532126 USP31Q70CQ4 1352 aa7.96□□□□□ -1.14
HMGB1P42-201ENST00000532126 AKAP12Q02952 1782 aa7.95□□□□□ -1.14
HMGB1P42-201ENST00000532126 COL14A1Q05707 1796 aaKnown RBP7.95□□□□□ -1.14
HMGB1P42-201ENST00000532126 SLIT3O75094 1523 aa7.95□□□□□ -1.14
HMGB1P42-201ENST00000532126 NRKQ7Z2Y5 1582 aa7.95□□□□□ -1.14
HMGB1P42-201ENST00000532126 PHRF1Q9P1Y6 1649 aaKnown RBP7.95□□□□□ -1.14
HMGB1P42-201ENST00000532126 PIK3C2AO00443 1686 aa7.95□□□□□ -1.14
HMGB1P42-201ENST00000532126 MON2Q7Z3U7 1717 aa7.95□□□□□ -1.14
HMGB1P42-201ENST00000532126 CRYBG1Q9Y4K1 1723 aa7.95□□□□□ -1.14
HMGB1P42-201ENST00000532126 RGS12O14924 1447 aa7.95□□□□□ -1.14
HMGB1P42-201ENST00000532126 PATL2C9JE40 543 aaKnown RBP7.94□□□□□ -1.14
HMGB1P42-201ENST00000532126 ONECUT3O60422 494 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P42-201ENST00000532126 PDE4CQ08493 712 aa7.94□□□□□ -1.14
HMGB1P42-201ENST00000532126 RBM26Q5T8P6 1007 aaKnown RBP7.94□□□□□ -1.14
HMGB1P42-201ENST00000532126 COG3Q96JB2 828 aa7.94□□□□□ -1.14
HMGB1P42-201ENST00000532126 MTMR7Q9Y216 660 aa7.94□□□□□ -1.14
HMGB1P42-201ENST00000532126 PLCH1Q4KWH8 1693 aa7.94□□□□□ -1.14
HMGB1P42-201ENST00000532126 AATKQ6ZMQ8 1374 aa7.94□□□□□ -1.14
HMGB1P42-201ENST00000532126 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.93□□□□□ -1.14
HMGB1P42-201ENST00000532126 NWD2Q9ULI1 1742 aa7.93□□□□□ -1.14
HMGB1P42-201ENST00000532126 C11orf95C9JLR9 678 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P42-201ENST00000532126 HSP90B1P14625 803 aaKnown RBP7.93□□□□□ -1.14
HMGB1P42-201ENST00000532126 MFAP1P55081 439 aaKnown RBP7.93□□□□□ -1.14
HMGB1P42-201ENST00000532126 ARHGEF25Q86VW2 580 aa7.93□□□□□ -1.14
HMGB1P42-201ENST00000532126 CLUAP1Q96AJ1 413 aa7.93□□□□□ -1.14
HMGB1P42-201ENST00000532126 CARD14Q9BXL6 1004 aa7.93□□□□□ -1.14
HMGB1P42-201ENST00000532126 SPATA31A5Q5VU36 1347 aa7.93□□□□□ -1.14
HMGB1P42-201ENST00000532126 SPATA31A7Q8IWB4 1347 aa7.93□□□□□ -1.14
HMGB1P42-201ENST00000532126 CAMTA1Q9Y6Y1 1673 aa7.92□□□□□ -1.14
HMGB1P42-201ENST00000532126 A0A0G2JS52 829 aa7.92□□□□□ -1.14
HMGB1P42-201ENST00000532126 FYB1O15117 783 aa7.92□□□□□ -1.14
HMGB1P42-201ENST00000532126 RBM25P49756 843 aaKnown RBP7.92□□□□□ -1.14
HMGB1P42-201ENST00000532126 FXR2P51116 673 aaKnown RBP eCLIP7.92□□□□□ -1.14
HMGB1P42-201ENST00000532126 FAM98CQ17RN3 349 aaKnown RBP7.92□□□□□ -1.14
HMGB1P42-201ENST00000532126 LARP1Q6PKG0 1096 aaKnown RBP7.92□□□□□ -1.14
HMGB1P42-201ENST00000532126 SEPT12Q8IYM1 358 aa7.92□□□□□ -1.14
HMGB1P42-201ENST00000532126 GGNBP2Q9H3C7 697 aa7.92□□□□□ -1.14
HMGB1P42-201ENST00000532126 USP35Q9P2H5 1018 aa7.92□□□□□ -1.14
HMGB1P42-201ENST00000532126 OVOS2A0A0J9YW53 1432 aa7.92□□□□□ -1.14
HMGB1P42-201ENST00000532126 OVOS2Q6IE36 1432 aa7.92□□□□□ -1.14
HMGB1P42-201ENST00000532126 NSD3Q9BZ95 1437 aa7.92□□□□□ -1.14
HMGB1P42-201ENST00000532126 IGSF3O75054 1194 aa7.91□□□□□ -1.14
HMGB1P42-201ENST00000532126 CSB-PGBD3P0DP91 1061 aa7.91□□□□□ -1.14
HMGB1P42-201ENST00000532126 MLLT3P42568 568 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P42-201ENST00000532126 PANK3Q9H999 370 aa7.91□□□□□ -1.14
HMGB1P42-201ENST00000532126 AXIN2Q9Y2T1 843 aa7.91□□□□□ -1.14
HMGB1P42-201ENST00000532126 KIF7Q2M1P5 1343 aa7.91□□□□□ -1.14
HMGB1P42-201ENST00000532126 SPATA31A1Q5TZJ5 1347 aa7.91□□□□□ -1.14
HMGB1P42-201ENST00000532126 COL5A2P05997 1499 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P42-201ENST00000532126 NFAT5O94916 1531 aa7.91□□□□□ -1.14
HMGB1P42-201ENST00000532126 GLI3P10071 1580 aa7.91□□□□□ -1.14
HMGB1P42-201ENST00000532126 NRAPQ86VF7 1730 aa7.9□□□□□ -1.14
HMGB1P42-201ENST00000532126 CGNL1Q0VF96 1302 aa7.9□□□□□ -1.14
HMGB1P42-201ENST00000532126 E9PSI1 815 aa7.9□□□□□ -1.14
HMGB1P42-201ENST00000532126 CDK11BP21127 795 aaKnown RBP7.9□□□□□ -1.14
HMGB1P42-201ENST00000532126 TOM1L2Q6ZVM7 507 aa7.9□□□□□ -1.14
HMGB1P42-201ENST00000532126 TCP11L2Q8N4U5 519 aa7.9□□□□□ -1.14
HMGB1P42-201ENST00000532126 PCMTD1Q96MG8 357 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P42-201ENST00000532126 GZF1Q9H116 711 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms