RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 GPBP1L1Q9HC44 474 aaPredicted RBP11.2□□□□□ -0.62
NXF1-212ENST00000531872 DOT1LQ8TEK3 1739 aa11.19□□□□□ -0.62
NXF1-212ENST00000531872 SYTL4Q96C24 671 aaPredicted RBP11.19□□□□□ -0.62
NXF1-212ENST00000531872 CCNL1Q9UK58 526 aaPredicted RBP11.19□□□□□ -0.62
NXF1-212ENST00000531872 CD2APQ9Y5K6 639 aa11.19□□□□□ -0.62
NXF1-212ENST00000531872 FAM208AQ9UK61 1670 aaKnown RBP11.18□□□□□ -0.62
NXF1-212ENST00000531872 ROCK2O75116 1388 aaKnown RBP11.17□□□□□ -0.62
NXF1-212ENST00000531872 MSH5O43196 834 aa11.17□□□□□ -0.62
NXF1-212ENST00000531872 MSL1Q68DK7 614 aa11.17□□□□□ -0.62
NXF1-212ENST00000531872 EDC4Q6P2E9 1401 aaKnown RBP11.17□□□□□ -0.62
NXF1-212ENST00000531872 ZCRB1Q8TBF4 217 aaKnown RBP11.16□□□□□ -0.62
NXF1-212ENST00000531872 USP47Q96K76 1375 aa11.16□□□□□ -0.62
NXF1-212ENST00000531872 HDGFL2Q7Z4V5 671 aaPredicted RBP11.15□□□□□ -0.62
NXF1-212ENST00000531872 FLAD1Q8NFF5 587 aa11.15□□□□□ -0.62
NXF1-212ENST00000531872 LTV1Q96GA3 475 aaPredicted RBP11.15□□□□□ -0.62
NXF1-212ENST00000531872 SLC12A5Q9H2X9 1139 aa11.15□□□□□ -0.62
NXF1-212ENST00000531872 MEGF6O75095 1541 aa11.14□□□□□ -0.63
NXF1-212ENST00000531872 KIF3CO14782 793 aa11.14□□□□□ -0.63
NXF1-212ENST00000531872 ZNF526Q8TF50 670 aaPredicted RBP11.14□□□□□ -0.63
NXF1-212ENST00000531872 C5P01031 1676 aa11.14□□□□□ -0.63
NXF1-212ENST00000531872 HMGB2P26583 209 aaKnown RBP11.13□□□□□ -0.63
NXF1-212ENST00000531872 HOXC9P31274 260 aa11.13□□□□□ -0.63
NXF1-212ENST00000531872 TMC1Q8TDI8 760 aa11.13□□□□□ -0.63
NXF1-212ENST00000531872 A0A1W2PP64 1363 aa11.13□□□□□ -0.63
NXF1-212ENST00000531872 MAP3K19Q56UN5 1328 aa11.12□□□□□ -0.63
NXF1-212ENST00000531872 ADRA2BP18089 450 aa11.12□□□□□ -0.63
NXF1-212ENST00000531872 TERF2IPQ9NYB0 399 aa11.12□□□□□ -0.63
NXF1-212ENST00000531872 TAF1LQ8IZX4 1826 aa11.12□□□□□ -0.63
NXF1-212ENST00000531872 CGNL1Q0VF96 1302 aa11.11□□□□□ -0.63
NXF1-212ENST00000531872 IGSF1Q8N6C5 1336 aa11.11□□□□□ -0.63
NXF1-212ENST00000531872 RGPD2P0DJD1 1756 aa11.11□□□□□ -0.63
NXF1-212ENST00000531872 DNAJC5GQ8N7S2 189 aa11.11□□□□□ -0.63
NXF1-212ENST00000531872 PUS7Q96PZ0 661 aaKnown RBP11.11□□□□□ -0.63
NXF1-212ENST00000531872 CICQ96RK0 1608 aaPredicted RBP11.1□□□□□ -0.63
NXF1-212ENST00000531872 APLP1P51693 650 aa11.1□□□□□ -0.63
NXF1-212ENST00000531872 AMIGO3Q86WK7 504 aa11.1□□□□□ -0.63
NXF1-212ENST00000531872 PALLDQ8WX93 1383 aa11.1□□□□□ -0.63
NXF1-212ENST00000531872 TOGARAM1Q9Y4F4 1720 aa11.09□□□□□ -0.63
NXF1-212ENST00000531872 FBLN1P23142 703 aa11.09□□□□□ -0.63
NXF1-212ENST00000531872 AMPHP49418 695 aa11.09□□□□□ -0.63
NXF1-212ENST00000531872 NBPF6Q5VWK0 638 aa11.09□□□□□ -0.63
NXF1-212ENST00000531872 COG3Q96JB2 828 aa11.09□□□□□ -0.63
NXF1-212ENST00000531872 NBPF4Q96M43 638 aa11.09□□□□□ -0.63
NXF1-212ENST00000531872 SIN3AQ96ST3 1273 aa11.09□□□□□ -0.63
NXF1-212ENST00000531872 C4BP0C0L5 1744 aa11.09□□□□□ -0.63
NXF1-212ENST00000531872 RTL1A6NKG5 1358 aa11.08□□□□□ -0.64
NXF1-212ENST00000531872 UBR3Q6ZT12 1888 aa11.08□□□□□ -0.64
NXF1-212ENST00000531872 TOMM70O94826 608 aa11.07□□□□□ -0.64
NXF1-212ENST00000531872 RAPGEF4Q8WZA2 1011 aa11.07□□□□□ -0.64
NXF1-212ENST00000531872 AK7Q96M32 723 aa11.07□□□□□ -0.64
NXF1-212ENST00000531872 WWC3Q9ULE0 1092 aa11.07□□□□□ -0.64
NXF1-212ENST00000531872 NSD3Q9BZ95 1437 aa11.07□□□□□ -0.64
NXF1-212ENST00000531872 PCDH11XQ9BZA7 1347 aa11.07□□□□□ -0.64
NXF1-212ENST00000531872 PCDH11YQ9BZA8 1340 aa11.07□□□□□ -0.64
NXF1-212ENST00000531872 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.06□□□□□ -0.64
NXF1-212ENST00000531872 TATP17735 454 aaPredicted RBP11.06□□□□□ -0.64
NXF1-212ENST00000531872 SSFA2P28290 1259 aa11.06□□□□□ -0.64
NXF1-212ENST00000531872 MPRIPQ6WCQ1 1025 aa11.06□□□□□ -0.64
NXF1-212ENST00000531872 USHBP1Q8N6Y0 703 aa11.06□□□□□ -0.64
NXF1-212ENST00000531872 SMARCC1Q92922 1105 aaPredicted RBP11.06□□□□□ -0.64
NXF1-212ENST00000531872 CARD11Q9BXL7 1154 aa11.06□□□□□ -0.64
NXF1-212ENST00000531872 CYP27B1O15528 508 aa11.05□□□□□ -0.64
NXF1-212ENST00000531872 PHF14O94880 888 aa11.05□□□□□ -0.64
NXF1-212ENST00000531872 RRS1Q15050 365 aaKnown RBP11.05□□□□□ -0.64
NXF1-212ENST00000531872 SMIM5Q71RC9 77 aa11.05□□□□□ -0.64
NXF1-212ENST00000531872 MAP2P11137 1827 aaKnown RBP11.05□□□□□ -0.64
NXF1-212ENST00000531872 PCNTO95613 3336 aa11.04□□□□□ -0.64
NXF1-212ENST00000531872 SMG6Q86US8 1419 aaKnown RBP11.04□□□□□ -0.64
NXF1-212ENST00000531872 NEUROD1Q13562 356 aa11.04□□□□□ -0.64
NXF1-212ENST00000531872 PXDNLA1KZ92 1463 aa11.04□□□□□ -0.64
NXF1-212ENST00000531872 ITGB4P16144 1822 aa11.04□□□□□ -0.64
NXF1-212ENST00000531872 KIAA1551Q9HCM1 1747 aa11.04□□□□□ -0.64
NXF1-212ENST00000531872 KIF13BQ9NQT8 1826 aa11.03□□□□□ -0.64
NXF1-212ENST00000531872 LINC00116Q8NCU8 138 aa11.03□□□□□ -0.64
NXF1-212ENST00000531872 PIGBQ92521 554 aa11.03□□□□□ -0.64
NXF1-212ENST00000531872 INSRP06213 1382 aa11.03□□□□□ -0.64
NXF1-212ENST00000531872 WDR90Q96KV7 1748 aa11.02□□□□□ -0.65
NXF1-212ENST00000531872 LOC102724428A0A0B4J2F2 783 aa11.02□□□□□ -0.65
NXF1-212ENST00000531872 SIK1P57059 783 aa11.02□□□□□ -0.65
NXF1-212ENST00000531872 TGFB2P61812 414 aa11.02□□□□□ -0.65
NXF1-212ENST00000531872 NKX1-1Q15270 411 aaPredicted RBP11.02□□□□□ -0.65
NXF1-212ENST00000531872 JMYQ8N9B5 988 aa11.02□□□□□ -0.65
NXF1-212ENST00000531872 RBM46Q8TBY0 533 aaKnown RBP11.02□□□□□ -0.65
NXF1-212ENST00000531872 TESK2Q96S53 571 aa11.02□□□□□ -0.65
NXF1-212ENST00000531872 NMRK2Q9NPI5 230 aa11.02□□□□□ -0.65
NXF1-212ENST00000531872 FYB1O15117 783 aa11.01□□□□□ -0.65
NXF1-212ENST00000531872 MMP10P09238 476 aa11.01□□□□□ -0.65
NXF1-212ENST00000531872 HSP90AB2PQ58FF8 381 aa11.01□□□□□ -0.65
NXF1-212ENST00000531872 COL13A1Q5TAT6 717 aaPredicted RBP11.01□□□□□ -0.65
NXF1-212ENST00000531872 KLRG1Q96E93 195 aa11.01□□□□□ -0.65
NXF1-212ENST00000531872 KIF24Q5T7B8 1368 aa11.01□□□□□ -0.65
NXF1-212ENST00000531872 PKD1L3Q7Z443 1732 aa11.01□□□□□ -0.65
NXF1-212ENST00000531872 ITPK1Q13572 414 aa11□□□□□ -0.65
NXF1-212ENST00000531872 BCS1LQ9Y276 419 aa11□□□□□ -0.65
NXF1-212ENST00000531872 FLT4P35916 1363 aa11□□□□□ -0.65
NXF1-212ENST00000531872 NCAPD2Q15021 1401 aa11□□□□□ -0.65
NXF1-212ENST00000531872 C10orf71Q711Q0 1435 aa11□□□□□ -0.65
NXF1-212ENST00000531872 N4BP2Q86UW6 1770 aaPredicted RBP10.99□□□□□ -0.65
NXF1-212ENST00000531872 A0A0G2JLW4 131 aa10.99□□□□□ -0.65
NXF1-212ENST00000531872 GNPATO15228 680 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms