RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 ATP10DQ9P241 1426 aa21.04■□□□□ 0.96
VPS26B-206ENST00000531741 USP54Q70EL1 1684 aa21.03■□□□□ 0.96
VPS26B-206ENST00000531741 MCM10Q7L590 875 aa21.03■□□□□ 0.96
VPS26B-206ENST00000531741 ANKARQ7Z5J8 1434 aa21.03■□□□□ 0.96
VPS26B-206ENST00000531741 RPAP2Q8IXW5 612 aaPredicted RBP21.03■□□□□ 0.96
VPS26B-206ENST00000531741 ANKRD44Q8N8A2 993 aa21.03■□□□□ 0.96
VPS26B-206ENST00000531741 PIK3C2AO00443 1686 aa21.02■□□□□ 0.96
VPS26B-206ENST00000531741 NUTM2FA1L443 756 aa21.01■□□□□ 0.95
VPS26B-206ENST00000531741 TBC1D9Q6ZT07 1266 aa21.01■□□□□ 0.95
VPS26B-206ENST00000531741 IGSF1Q8N6C5 1336 aa21.01■□□□□ 0.95
VPS26B-206ENST00000531741 RGPD8O14715 1765 aaPredicted RBP21■□□□□ 0.95
VPS26B-206ENST00000531741 CEBPAP49715 358 aaPredicted RBP21■□□□□ 0.95
VPS26B-206ENST00000531741 FER1L4A9Z1Z3 1794 aa21■□□□□ 0.95
VPS26B-206ENST00000531741 DDIT3P35638 169 aa21■□□□□ 0.95
VPS26B-206ENST00000531741 THEMISQ8N1K5 641 aaPredicted RBP21■□□□□ 0.95
VPS26B-206ENST00000531741 KRT24Q2M2I5 525 aa20.99■□□□□ 0.95
VPS26B-206ENST00000531741 LRRC37A3O60309 1634 aa20.99■□□□□ 0.95
VPS26B-206ENST00000531741 HTATSF1O43719 755 aaKnown RBP20.98■□□□□ 0.95
VPS26B-206ENST00000531741 CDC45O75419 566 aa20.98■□□□□ 0.95
VPS26B-206ENST00000531741 PLEKHM2Q8IWE5 1019 aa20.98■□□□□ 0.95
VPS26B-206ENST00000531741 RTL1A6NKG5 1358 aa20.98■□□□□ 0.95
VPS26B-206ENST00000531741 MCM4P33991 863 aa20.98■□□□□ 0.95
VPS26B-206ENST00000531741 NGDNQ8NEJ9 315 aaKnown RBP20.98■□□□□ 0.95
VPS26B-206ENST00000531741 IL27Q8NEV9 243 aa20.98■□□□□ 0.95
VPS26B-206ENST00000531741 KIF2CQ99661 725 aa20.98■□□□□ 0.95
VPS26B-206ENST00000531741 MTHFSDQ2M296 383 aaKnown RBP20.97■□□□□ 0.95
VPS26B-206ENST00000531741 CEP85Q6P2H3 762 aa20.97■□□□□ 0.95
VPS26B-206ENST00000531741 GAS2L2Q8NHY3 880 aa20.97■□□□□ 0.95
VPS26B-206ENST00000531741 MSH6P52701 1360 aa20.97■□□□□ 0.95
VPS26B-206ENST00000531741 RTF1Q92541 710 aaKnown RBP20.97■□□□□ 0.95
VPS26B-206ENST00000531741 CIZ1Q9ULV3 898 aaPredicted RBP20.97■□□□□ 0.95
VPS26B-206ENST00000531741 CEP170BQ9Y4F5 1589 aaPredicted RBP20.96■□□□□ 0.95
VPS26B-206ENST00000531741 MARF1Q9Y4F3 1742 aaKnown RBP20.96■□□□□ 0.95
VPS26B-206ENST00000531741 GSPT1P15170 499 aaKnown RBP20.95■□□□□ 0.94
VPS26B-206ENST00000531741 EYA1Q99502 592 aa20.95■□□□□ 0.94
VPS26B-206ENST00000531741 AMPHP49418 695 aa20.94■□□□□ 0.94
VPS26B-206ENST00000531741 TTC22Q5TAA0 569 aa20.94■□□□□ 0.94
VPS26B-206ENST00000531741 SPRYD3Q8NCJ5 442 aa20.93■□□□□ 0.94
VPS26B-206ENST00000531741 TSPYL4Q9UJ04 414 aa20.93■□□□□ 0.94
VPS26B-206ENST00000531741 SOS1Q07889 1333 aaPredicted RBP20.93■□□□□ 0.94
VPS26B-206ENST00000531741 SLC4A2P04920 1241 aa20.93■□□□□ 0.94
VPS26B-206ENST00000531741 BRPF3Q9ULD4 1205 aa20.93■□□□□ 0.94
VPS26B-206ENST00000531741 NWD1Q149M9 1564 aa20.92■□□□□ 0.94
VPS26B-206ENST00000531741 SOX12O15370 315 aa20.92■□□□□ 0.94
VPS26B-206ENST00000531741 FOXO3O43524 673 aa20.92■□□□□ 0.94
VPS26B-206ENST00000531741 CCT4P50991 539 aaKnown RBP20.92■□□□□ 0.94
VPS26B-206ENST00000531741 MEIS3Q99687 375 aa20.91■□□□□ 0.94
VPS26B-206ENST00000531741 BABAM1Q9NWV8 329 aa20.9■□□□□ 0.94
VPS26B-206ENST00000531741 CACNA1FO60840 1977 aa20.9■□□□□ 0.94
VPS26B-206ENST00000531741 DDX11L8A8MPP1 907 aa20.89■□□□□ 0.93
VPS26B-206ENST00000531741 HMMRO75330 724 aa20.89■□□□□ 0.93
VPS26B-206ENST00000531741 L1TD1Q5T7N2 865 aaKnown RBP20.89■□□□□ 0.93
VPS26B-206ENST00000531741 FAM208AQ9UK61 1670 aaKnown RBP20.89■□□□□ 0.93
VPS26B-206ENST00000531741 HSP90AB1P08238 724 aaKnown RBP20.89■□□□□ 0.93
VPS26B-206ENST00000531741 NLRP6P59044 892 aa20.89■□□□□ 0.93
VPS26B-206ENST00000531741 HOXC9P31274 260 aa20.88■□□□□ 0.93
VPS26B-206ENST00000531741 N4BP2Q86UW6 1770 aaPredicted RBP20.88■□□□□ 0.93
VPS26B-206ENST00000531741 K7ELQ4 463 aaPredicted RBP20.87■□□□□ 0.93
VPS26B-206ENST00000531741 MIS18AQ9NYP9 233 aa20.87■□□□□ 0.93
VPS26B-206ENST00000531741 GNAT3A8MTJ3 354 aa20.87■□□□□ 0.93
VPS26B-206ENST00000531741 KCNA6P17658 529 aa20.85■□□□□ 0.93
VPS26B-206ENST00000531741 G2E3Q7L622 706 aa20.85■□□□□ 0.93
VPS26B-206ENST00000531741 STK31Q9BXU1 1019 aa20.85■□□□□ 0.93
VPS26B-206ENST00000531741 OSBPL3Q9H4L5 887 aa20.85■□□□□ 0.93
VPS26B-206ENST00000531741 RAB3GAP1Q15042 981 aa20.85■□□□□ 0.93
VPS26B-206ENST00000531741 C16orf71Q8IYS4 520 aaPredicted RBP20.85■□□□□ 0.93
VPS26B-206ENST00000531741 MAP3K5Q99683 1374 aa20.85■□□□□ 0.93
VPS26B-206ENST00000531741 RABEP1Q15276 862 aa20.84■□□□□ 0.93
VPS26B-206ENST00000531741 CCDC30Q5VVM6 783 aa20.84■□□□□ 0.93
VPS26B-206ENST00000531741 PXDNLA1KZ92 1463 aa20.83■□□□□ 0.93
VPS26B-206ENST00000531741 FSD2A1L4K1 749 aa20.83■□□□□ 0.93
VPS26B-206ENST00000531741 TRAK2O60296 914 aa20.83■□□□□ 0.93
VPS26B-206ENST00000531741 CD2BP2O95400 341 aaKnown RBP20.83■□□□□ 0.93
VPS26B-206ENST00000531741 CASC1Q6TDU7 716 aa20.83■□□□□ 0.93
VPS26B-206ENST00000531741 USP26Q9BXU7 913 aa20.83■□□□□ 0.93
VPS26B-206ENST00000531741 GNAI2P04899 355 aa20.82■□□□□ 0.92
VPS26B-206ENST00000531741 SDSP20132 328 aa20.82■□□□□ 0.92
VPS26B-206ENST00000531741 PTMSP20962 102 aa20.82■□□□□ 0.92
VPS26B-206ENST00000531741 OTUD7AQ8TE49 926 aaPredicted RBP20.82■□□□□ 0.92
VPS26B-206ENST00000531741 GBP4Q96PP9 640 aa20.81■□□□□ 0.92
VPS26B-206ENST00000531741 CHD2O14647 1828 aaKnown RBP20.81■□□□□ 0.92
VPS26B-206ENST00000531741 F6X3S4 739 aa20.81■□□□□ 0.92
VPS26B-206ENST00000531741 GNAI3P08754 354 aa20.81■□□□□ 0.92
VPS26B-206ENST00000531741 FLIIQ13045 1269 aa20.81■□□□□ 0.92
VPS26B-206ENST00000531741 TNPO1Q92973 898 aaKnown RBP20.81■□□□□ 0.92
VPS26B-206ENST00000531741 SLC4A10Q6U841 1118 aa20.8■□□□□ 0.92
VPS26B-206ENST00000531741 ABTB2Q8N961 1025 aa20.8■□□□□ 0.92
VPS26B-206ENST00000531741 SMARCA5O60264 1052 aaPredicted RBP20.79■□□□□ 0.92
VPS26B-206ENST00000531741 TAF7Q15545 349 aaPredicted RBP20.79■□□□□ 0.92
VPS26B-206ENST00000531741 IL17REQ8NFR9 667 aa20.79■□□□□ 0.92
VPS26B-206ENST00000531741 RBM42Q9BTD8 480 aaKnown RBP20.79■□□□□ 0.92
VPS26B-206ENST00000531741 LTN1O94822 1766 aa20.79■□□□□ 0.92
VPS26B-206ENST00000531741 CLEC17AQ6ZS10 378 aa20.79■□□□□ 0.92
VPS26B-206ENST00000531741 HSP90AA1P07900 732 aaKnown RBP20.78■□□□□ 0.92
VPS26B-206ENST00000531741 ISY1Q9ULR0 285 aaKnown RBP20.78■□□□□ 0.92
VPS26B-206ENST00000531741 PHRF1Q9P1Y6 1649 aaKnown RBP20.78■□□□□ 0.92
VPS26B-206ENST00000531741 NFAT5O94916 1531 aa20.78■□□□□ 0.92
VPS26B-206ENST00000531741 GOLGA6L3A6NEY3 463 aa20.77■□□□□ 0.92
VPS26B-206ENST00000531741 REC8O95072 547 aa20.77■□□□□ 0.92
VPS26B-206ENST00000531741 TUBGCP6Q96RT7 1819 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms