RNA–Protein interactions for RNA: ENST00000531572.1

EIF3F-206, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

TSL 2

Gene EIF3F, Length 485 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-206ENST00000531572 TOMM70O94826 608 aa11.25□□□□□ -0.61
EIF3F-206ENST00000531572 ANKRD24Q8TF21 1146 aa11.24□□□□□ -0.61
EIF3F-206ENST00000531572 CCNL1Q9UK58 526 aaPredicted RBP11.24□□□□□ -0.61
EIF3F-206ENST00000531572 PRIM1P49642 420 aaKnown RBP11.23□□□□□ -0.61
EIF3F-206ENST00000531572 JMYQ8N9B5 988 aa11.23□□□□□ -0.61
EIF3F-206ENST00000531572 KTN1Q86UP2 1357 aaKnown RBP11.23□□□□□ -0.61
EIF3F-206ENST00000531572 USP54Q70EL1 1684 aa11.23□□□□□ -0.61
EIF3F-206ENST00000531572 LY75O60449 1722 aa11.23□□□□□ -0.61
EIF3F-206ENST00000531572 SOX12O15370 315 aa11.22□□□□□ -0.61
EIF3F-206ENST00000531572 NSD2O96028 1365 aa11.22□□□□□ -0.61
EIF3F-206ENST00000531572 DDX54Q8TDD1 881 aaKnown RBP11.22□□□□□ -0.61
EIF3F-206ENST00000531572 IP6K1Q92551 441 aa11.21□□□□□ -0.61
EIF3F-206ENST00000531572 TUBGCP6Q96RT7 1819 aa11.21□□□□□ -0.62
EIF3F-206ENST00000531572 USP47Q96K76 1375 aa11.2□□□□□ -0.62
EIF3F-206ENST00000531572 CGNL1Q0VF96 1302 aa11.2□□□□□ -0.62
EIF3F-206ENST00000531572 PRELPP51888 382 aa11.2□□□□□ -0.62
EIF3F-206ENST00000531572 C1QBPQ07021 282 aaKnown RBP11.2□□□□□ -0.62
EIF3F-206ENST00000531572 ZNF526Q8TF50 670 aaPredicted RBP11.2□□□□□ -0.62
EIF3F-206ENST00000531572 KCNQ4P56696 695 aa11.19□□□□□ -0.62
EIF3F-206ENST00000531572 ZCRB1Q8TBF4 217 aaKnown RBP11.19□□□□□ -0.62
EIF3F-206ENST00000531572 RBM46Q8TBY0 533 aaKnown RBP11.19□□□□□ -0.62
EIF3F-206ENST00000531572 SYTL4Q96C24 671 aaPredicted RBP11.19□□□□□ -0.62
EIF3F-206ENST00000531572 KAT6BQ8WYB5 2073 aa11.19□□□□□ -0.62
EIF3F-206ENST00000531572 IGSF1Q8N6C5 1336 aa11.18□□□□□ -0.62
EIF3F-206ENST00000531572 CICQ96RK0 1608 aaPredicted RBP11.18□□□□□ -0.62
EIF3F-206ENST00000531572 KLRG1Q96E93 195 aa11.18□□□□□ -0.62
EIF3F-206ENST00000531572 NSD3Q9BZ95 1437 aa11.18□□□□□ -0.62
EIF3F-206ENST00000531572 FAM208AQ9UK61 1670 aaKnown RBP11.17□□□□□ -0.62
EIF3F-206ENST00000531572 SBNO2Q9Y2G9 1366 aa11.17□□□□□ -0.62
EIF3F-206ENST00000531572 FSTL1Q12841 308 aa11.17□□□□□ -0.62
EIF3F-206ENST00000531572 COL13A1Q5TAT6 717 aaPredicted RBP11.17□□□□□ -0.62
EIF3F-206ENST00000531572 MSL1Q68DK7 614 aa11.16□□□□□ -0.62
EIF3F-206ENST00000531572 PUS7Q96PZ0 661 aaKnown RBP11.16□□□□□ -0.62
EIF3F-206ENST00000531572 MON2Q7Z3U7 1717 aa11.15□□□□□ -0.62
EIF3F-206ENST00000531572 TGFB2P61812 414 aa11.15□□□□□ -0.62
EIF3F-206ENST00000531572 NME9Q86XW9 330 aa11.15□□□□□ -0.62
EIF3F-206ENST00000531572 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.15□□□□□ -0.62
EIF3F-206ENST00000531572 EDC4Q6P2E9 1401 aaKnown RBP11.15□□□□□ -0.62
EIF3F-206ENST00000531572 LTN1O94822 1766 aa11.14□□□□□ -0.63
EIF3F-206ENST00000531572 SSFA2P28290 1259 aa11.14□□□□□ -0.63
EIF3F-206ENST00000531572 HDGFL2Q7Z4V5 671 aaPredicted RBP11.14□□□□□ -0.63
EIF3F-206ENST00000531572 TNS4Q8IZW8 715 aa11.14□□□□□ -0.63
EIF3F-206ENST00000531572 SMARCC1Q92922 1105 aaPredicted RBP11.14□□□□□ -0.63
EIF3F-206ENST00000531572 CD163L1Q9NR16 1453 aa11.13□□□□□ -0.63
EIF3F-206ENST00000531572 NPM3O75607 178 aaKnown RBP11.13□□□□□ -0.63
EIF3F-206ENST00000531572 DOT1LQ8TEK3 1739 aa11.12□□□□□ -0.63
EIF3F-206ENST00000531572 C10orf71Q711Q0 1435 aa11.12□□□□□ -0.63
EIF3F-206ENST00000531572 C5P01031 1676 aa11.12□□□□□ -0.63
EIF3F-206ENST00000531572 HOXC9P31274 260 aa11.12□□□□□ -0.63
EIF3F-206ENST00000531572 AK7Q96M32 723 aa11.12□□□□□ -0.63
EIF3F-206ENST00000531572 TERF2IPQ9NYB0 399 aa11.12□□□□□ -0.63
EIF3F-206ENST00000531572 PALLDQ8WX93 1383 aa11.12□□□□□ -0.63
EIF3F-206ENST00000531572 PCNTO95613 3336 aa11.12□□□□□ -0.63
EIF3F-206ENST00000531572 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.11□□□□□ -0.63
EIF3F-206ENST00000531572 C16orf71Q8IYS4 520 aaPredicted RBP11.11□□□□□ -0.63
EIF3F-206ENST00000531572 WDR90Q96KV7 1748 aa11.11□□□□□ -0.63
EIF3F-206ENST00000531572 PLEKHG2Q9H7P9 1386 aa11.11□□□□□ -0.63
EIF3F-206ENST00000531572 NMRK2Q9NPI5 230 aa11.1□□□□□ -0.63
EIF3F-206ENST00000531572 PCDH11XQ9BZA7 1347 aa11.09□□□□□ -0.63
EIF3F-206ENST00000531572 PCDH11YQ9BZA8 1340 aa11.09□□□□□ -0.63
EIF3F-206ENST00000531572 MEGF6O75095 1541 aa11.09□□□□□ -0.63
EIF3F-206ENST00000531572 RTL1A6NKG5 1358 aa11.09□□□□□ -0.63
EIF3F-206ENST00000531572 RAPGEF4Q8WZA2 1011 aa11.09□□□□□ -0.63
EIF3F-206ENST00000531572 TAF1LQ8IZX4 1826 aa11.09□□□□□ -0.63
EIF3F-206ENST00000531572 C4BP0C0L5 1744 aa11.09□□□□□ -0.63
EIF3F-206ENST00000531572 MAP3K19Q56UN5 1328 aa11.09□□□□□ -0.63
EIF3F-206ENST00000531572 KDM2BQ8NHM5 1336 aa11.09□□□□□ -0.63
EIF3F-206ENST00000531572 PXDNLA1KZ92 1463 aa11.08□□□□□ -0.64
EIF3F-206ENST00000531572 ROCK2O75116 1388 aaKnown RBP11.08□□□□□ -0.64
EIF3F-206ENST00000531572 AMPHP49418 695 aa11.08□□□□□ -0.64
EIF3F-206ENST00000531572 NKX1-1Q15270 411 aaPredicted RBP11.08□□□□□ -0.64
EIF3F-206ENST00000531572 NBPF6Q5VWK0 638 aa11.08□□□□□ -0.64
EIF3F-206ENST00000531572 NLGN1Q8N2Q7 840 aa11.08□□□□□ -0.64
EIF3F-206ENST00000531572 L3MBTL2Q969R5 705 aa11.08□□□□□ -0.64
EIF3F-206ENST00000531572 LTV1Q96GA3 475 aaPredicted RBP11.08□□□□□ -0.64
EIF3F-206ENST00000531572 NBPF4Q96M43 638 aa11.08□□□□□ -0.64
EIF3F-206ENST00000531572 SLC12A5Q9H2X9 1139 aa11.08□□□□□ -0.64
EIF3F-206ENST00000531572 SLC34A2O95436 690 aa11.07□□□□□ -0.64
EIF3F-206ENST00000531572 TATP17735 454 aaPredicted RBP11.07□□□□□ -0.64
EIF3F-206ENST00000531572 AMIGO3Q86WK7 504 aa11.07□□□□□ -0.64
EIF3F-206ENST00000531572 COG3Q96JB2 828 aa11.07□□□□□ -0.64
EIF3F-206ENST00000531572 KIF13BQ9NQT8 1826 aa11.07□□□□□ -0.64
EIF3F-206ENST00000531572 SLC24A1O60721 1099 aa11.06□□□□□ -0.64
EIF3F-206ENST00000531572 CAPN15O75808 1086 aa11.06□□□□□ -0.64
EIF3F-206ENST00000531572 MPRIPQ6WCQ1 1025 aa11.06□□□□□ -0.64
EIF3F-206ENST00000531572 ARHGAP27Q6ZUM4 889 aa11.06□□□□□ -0.64
EIF3F-206ENST00000531572 SMC1BQ8NDV3 1235 aa11.06□□□□□ -0.64
EIF3F-206ENST00000531572 TMC1Q8TDI8 760 aa11.06□□□□□ -0.64
EIF3F-206ENST00000531572 BCS1LQ9Y276 419 aa11.06□□□□□ -0.64
EIF3F-206ENST00000531572 UBR3Q6ZT12 1888 aa11.06□□□□□ -0.64
EIF3F-206ENST00000531572 ZC3H4Q9UPT8 1303 aaKnown RBP11.06□□□□□ -0.64
EIF3F-206ENST00000531572 A0A1W2PP64 1363 aa11.05□□□□□ -0.64
EIF3F-206ENST00000531572 KIF24Q5T7B8 1368 aa11.05□□□□□ -0.64
EIF3F-206ENST00000531572 LOC102724428A0A0B4J2F2 783 aa11.05□□□□□ -0.64
EIF3F-206ENST00000531572 MMP10P09238 476 aa11.05□□□□□ -0.64
EIF3F-206ENST00000531572 SIK1P57059 783 aa11.05□□□□□ -0.64
EIF3F-206ENST00000531572 WWC3Q9ULE0 1092 aa11.05□□□□□ -0.64
EIF3F-206ENST00000531572 TOGARAM1Q9Y4F4 1720 aa11.05□□□□□ -0.64
EIF3F-206ENST00000531572 SMG6Q86US8 1419 aaKnown RBP11.04□□□□□ -0.64
EIF3F-206ENST00000531572 CYP27B1O15528 508 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms