RNA–Protein interactions for RNA: ENST00000531138.1

RAB38-203, Transcript of RAB38, member RAS oncogene family, humanhuman

TSL 2

Gene RAB38, Length 928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-203ENST00000531138 RAPGEF4Q8WZA2 1011 aa21.66■■□□□ 1.06
RAB38-203ENST00000531138 SHANK3Q9BYB0 1731 aa21.66■■□□□ 1.06
RAB38-203ENST00000531138 NPC1L1Q9UHC9 1359 aa21.65■■□□□ 1.06
RAB38-203ENST00000531138 TATP17735 454 aaPredicted RBP21.65■■□□□ 1.06
RAB38-203ENST00000531138 CNGB1Q14028 1251 aaPredicted RBP21.63■■□□□ 1.05
RAB38-203ENST00000531138 SRCAPQ6ZRS2 3230 aa21.63■■□□□ 1.05
RAB38-203ENST00000531138 PARD3Q8TEW0 1356 aa21.62■■□□□ 1.05
RAB38-203ENST00000531138 PLSCR1O15162 318 aa21.62■■□□□ 1.05
RAB38-203ENST00000531138 IGSF1Q8N6C5 1336 aa21.61■■□□□ 1.05
RAB38-203ENST00000531138 NHSQ6T4R5 1651 aa21.61■■□□□ 1.05
RAB38-203ENST00000531138 RREB1Q92766 1687 aa21.61■■□□□ 1.05
RAB38-203ENST00000531138 MTHFSP49914 203 aa21.61■■□□□ 1.05
RAB38-203ENST00000531138 PROM2Q8N271 834 aa21.61■■□□□ 1.05
RAB38-203ENST00000531138 CYP27B1O15528 508 aa21.59■■□□□ 1.05
RAB38-203ENST00000531138 IL13P35225 146 aa21.59■■□□□ 1.05
RAB38-203ENST00000531138 PSDA5PKW4 1024 aaPredicted RBP21.58■■□□□ 1.05
RAB38-203ENST00000531138 NUP188Q5SRE5 1749 aa21.58■■□□□ 1.04
RAB38-203ENST00000531138 PCDH11XQ9BZA7 1347 aa21.56■■□□□ 1.04
RAB38-203ENST00000531138 PCDH11YQ9BZA8 1340 aa21.56■■□□□ 1.04
RAB38-203ENST00000531138 PKD1L3Q7Z443 1732 aa21.56■■□□□ 1.04
RAB38-203ENST00000531138 PRIM1P49642 420 aaKnown RBP21.56■■□□□ 1.04
RAB38-203ENST00000531138 AEBP1Q8IUX7 1158 aa21.56■■□□□ 1.04
RAB38-203ENST00000531138 RGPD3A6NKT7 1758 aaPredicted RBP21.56■■□□□ 1.04
RAB38-203ENST00000531138 RGPD4Q7Z3J3 1758 aa21.56■■□□□ 1.04
RAB38-203ENST00000531138 R3HDM1Q15032 1099 aaKnown RBP21.55■■□□□ 1.04
RAB38-203ENST00000531138 BTAF1O14981 1849 aa21.53■■□□□ 1.04
RAB38-203ENST00000531138 DOT1LQ8TEK3 1739 aa21.53■■□□□ 1.04
RAB38-203ENST00000531138 TXNRD1Q16881 649 aa21.53■■□□□ 1.04
RAB38-203ENST00000531138 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.53■■□□□ 1.04
RAB38-203ENST00000531138 SYTL4Q96C24 671 aaPredicted RBP21.52■■□□□ 1.04
RAB38-203ENST00000531138 ANO8Q9HCE9 1232 aaPredicted RBP21.52■■□□□ 1.04
RAB38-203ENST00000531138 SPG7Q9UQ90 795 aa21.52■■□□□ 1.04
RAB38-203ENST00000531138 COL3A1P02461 1466 aaPredicted RBP21.52■■□□□ 1.03
RAB38-203ENST00000531138 SULT6B1Q6IMI4 303 aa21.51■■□□□ 1.03
RAB38-203ENST00000531138 NKX1-1Q15270 411 aaPredicted RBP21.5■■□□□ 1.03
RAB38-203ENST00000531138 KDRP35968 1356 aa21.49■■□□□ 1.03
RAB38-203ENST00000531138 KAT6BQ8WYB5 2073 aa21.49■■□□□ 1.03
RAB38-203ENST00000531138 PHKG2P15735 406 aa21.49■■□□□ 1.03
RAB38-203ENST00000531138 LRRC4BQ9NT99 713 aa21.48■■□□□ 1.03
RAB38-203ENST00000531138 TOGARAM1Q9Y4F4 1720 aa21.48■■□□□ 1.03
RAB38-203ENST00000531138 PLEKHG2Q9H7P9 1386 aa21.48■■□□□ 1.03
RAB38-203ENST00000531138 DIAPH1O60610 1272 aaKnown RBP21.47■■□□□ 1.03
RAB38-203ENST00000531138 PPP2R1AP30153 589 aa21.47■■□□□ 1.03
RAB38-203ENST00000531138 NBPF14Q5TI25 921 aa21.47■■□□□ 1.03
RAB38-203ENST00000531138 ZEB1P37275 1124 aaPredicted RBP21.46■■□□□ 1.03
RAB38-203ENST00000531138 IFNL2Q8IZJ0 200 aa21.46■■□□□ 1.03
RAB38-203ENST00000531138 HMOX1P09601 288 aa21.45■■□□□ 1.02
RAB38-203ENST00000531138 KCNQ4P56696 695 aa21.44■■□□□ 1.02
RAB38-203ENST00000531138 DDX10Q13206 875 aaKnown RBP21.44■■□□□ 1.02
RAB38-203ENST00000531138 PLEKHO1Q53GL0 409 aaPredicted RBP21.44■■□□□ 1.02
RAB38-203ENST00000531138 MPRIPQ6WCQ1 1025 aa21.43■■□□□ 1.02
RAB38-203ENST00000531138 PIGBQ92521 554 aa21.43■■□□□ 1.02
RAB38-203ENST00000531138 PAPPAQ13219 1627 aa21.42■■□□□ 1.02
RAB38-203ENST00000531138 AMOTQ4VCS5 1084 aa21.42■■□□□ 1.02
RAB38-203ENST00000531138 ZNF530Q6P9A1 599 aaPredicted RBP21.42■■□□□ 1.02
RAB38-203ENST00000531138 PDGFDQ9GZP0 370 aaPredicted RBP21.4■■□□□ 1.02
RAB38-203ENST00000531138 ITGB4P16144 1822 aa21.4■■□□□ 1.02
RAB38-203ENST00000531138 KDM6AO15550 1401 aaPredicted RBP21.39■■□□□ 1.02
RAB38-203ENST00000531138 SLC15A2Q16348 729 aa21.39■■□□□ 1.01
RAB38-203ENST00000531138 ZNF827Q17R98 1081 aa21.39■■□□□ 1.01
RAB38-203ENST00000531138 SLC27A3Q5K4L6 730 aa21.39■■□□□ 1.01
RAB38-203ENST00000531138 LY75O60449 1722 aa21.38■■□□□ 1.01
RAB38-203ENST00000531138 U2SURPO15042 1029 aaKnown RBP21.38■■□□□ 1.01
RAB38-203ENST00000531138 STK32BQ9NY57 414 aa21.38■■□□□ 1.01
RAB38-203ENST00000531138 PALLDQ8WX93 1383 aa21.36■■□□□ 1.01
RAB38-203ENST00000531138 AKT1S1Q96B36 256 aa21.36■■□□□ 1.01
RAB38-203ENST00000531138 DCAF5Q96JK2 942 aa21.36■■□□□ 1.01
RAB38-203ENST00000531138 CFAP53Q96M91 514 aa21.36■■□□□ 1.01
RAB38-203ENST00000531138 TMOD3Q9NYL9 352 aa21.36■■□□□ 1.01
RAB38-203ENST00000531138 MTHFSDQ2M296 383 aaKnown RBP21.35■■□□□ 1.01
RAB38-203ENST00000531138 CCNL1Q9UK58 526 aaPredicted RBP21.35■■□□□ 1.01
RAB38-203ENST00000531138 ASAP1Q9ULH1 1129 aa21.35■■□□□ 1.01
RAB38-203ENST00000531138 LRP5O75197 1615 aa21.34■■□□□ 1.01
RAB38-203ENST00000531138 ERVV-2B6SEH9 535 aa21.34■■□□□ 1.01
RAB38-203ENST00000531138 HSP90AB1P08238 724 aaKnown RBP21.34■■□□□ 1.01
RAB38-203ENST00000531138 CASZ1Q86V15 1759 aa21.33■■□□□ 1.01
RAB38-203ENST00000531138 C1orf141Q5JVX7 400 aa21.33■■□□□ 1.01
RAB38-203ENST00000531138 AKAP4Q5JQC9 854 aa21.32■■□□□ 1
RAB38-203ENST00000531138 SMARCC1Q92922 1105 aaPredicted RBP21.32■■□□□ 1
RAB38-203ENST00000531138 RSPH6AQ9H0K4 717 aa21.32■■□□□ 1
RAB38-203ENST00000531138 ATG3Q9NT62 314 aa21.32■■□□□ 1
RAB38-203ENST00000531138 LGR6Q9HBX8 967 aa21.31■■□□□ 1
RAB38-203ENST00000531138 PHACTR3Q96KR7 559 aa21.3■■□□□ 1
RAB38-203ENST00000531138 CABP4P57796 275 aa21.29■■□□□ 1
RAB38-203ENST00000531138 NUDCQ9Y266 331 aa21.29■■□□□ 1
RAB38-203ENST00000531138 ZBTB7AO95365 584 aa21.28■■□□□ 1
RAB38-203ENST00000531138 U2AF1L5P0DN76 240 aaPredicted RBP21.28■■□□□ 1
RAB38-203ENST00000531138 PRKAR2BP31323 418 aa21.28■■□□□ 1
RAB38-203ENST00000531138 U2AF1Q01081 240 aaKnown RBP eCLIP21.28■■□□□ 1
RAB38-203ENST00000531138 RALBP1Q15311 655 aa21.28■■□□□ 1
RAB38-203ENST00000531138 PNPLA7Q6ZV29 1317 aa21.28■■□□□ 1
RAB38-203ENST00000531138 LOC102724428A0A0B4J2F2 783 aa21.27■■□□□ 1
RAB38-203ENST00000531138 RNMTO43148 476 aaKnown RBP21.27■■□□□ 1
RAB38-203ENST00000531138 SIK1P57059 783 aa21.27■■□□□ 1
RAB38-203ENST00000531138 NFATC2IPQ8NCF5 419 aa21.27■■□□□ 1
RAB38-203ENST00000531138 SLC4A9Q96Q91 983 aa21.27■■□□□ 1
RAB38-203ENST00000531138 ITPK1Q13572 414 aa21.26■□□□□ 0.99
RAB38-203ENST00000531138 SPON1Q9HCB6 807 aa21.26■□□□□ 0.99
RAB38-203ENST00000531138 TFCP2L1Q9NZI6 479 aa21.25■□□□□ 0.99
RAB38-203ENST00000531138 SCN11AQ9UI33 1791 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms