RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 ZCRB1Q8TBF4 217 aaKnown RBP25.5■■□□□ 1.67
GMDS-208ENST00000530927 RAPGEF4Q8WZA2 1011 aa25.5■■□□□ 1.67
GMDS-208ENST00000530927 CAMKK2Q96RR4 588 aa25.5■■□□□ 1.67
GMDS-208ENST00000530927 TATP17735 454 aaPredicted RBP25.48■■□□□ 1.67
GMDS-208ENST00000530927 NHSQ6T4R5 1651 aa25.48■■□□□ 1.67
GMDS-208ENST00000530927 MTHFSP49914 203 aa25.47■■□□□ 1.67
GMDS-208ENST00000530927 BCL11BQ9C0K0 894 aaPredicted RBP25.47■■□□□ 1.67
GMDS-208ENST00000530927 NPC1L1Q9UHC9 1359 aa25.47■■□□□ 1.67
GMDS-208ENST00000530927 RREB1Q92766 1687 aa25.45■■□□□ 1.66
GMDS-208ENST00000530927 DOT1LQ8TEK3 1739 aa25.45■■□□□ 1.66
GMDS-208ENST00000530927 PKD1L3Q7Z443 1732 aa25.44■■□□□ 1.66
GMDS-208ENST00000530927 IGSF1Q8N6C5 1336 aa25.43■■□□□ 1.66
GMDS-208ENST00000530927 AEBP1Q8IUX7 1158 aa25.43■■□□□ 1.66
GMDS-208ENST00000530927 NUP188Q5SRE5 1749 aa25.43■■□□□ 1.66
GMDS-208ENST00000530927 CYP27B1O15528 508 aa25.41■■□□□ 1.66
GMDS-208ENST00000530927 IL13P35225 146 aa25.41■■□□□ 1.66
GMDS-208ENST00000530927 BTAF1O14981 1849 aa25.41■■□□□ 1.66
GMDS-208ENST00000530927 PSDA5PKW4 1024 aaPredicted RBP25.4■■□□□ 1.66
GMDS-208ENST00000530927 SRCAPQ6ZRS2 3230 aa25.4■■□□□ 1.66
GMDS-208ENST00000530927 KAT6BQ8WYB5 2073 aa25.39■■□□□ 1.66
GMDS-208ENST00000530927 PROM2Q8N271 834 aa25.38■■□□□ 1.65
GMDS-208ENST00000530927 PCDH11XQ9BZA7 1347 aa25.38■■□□□ 1.65
GMDS-208ENST00000530927 PCDH11YQ9BZA8 1340 aa25.38■■□□□ 1.65
GMDS-208ENST00000530927 PRIM1P49642 420 aaKnown RBP25.37■■□□□ 1.65
GMDS-208ENST00000530927 SYTL4Q96C24 671 aaPredicted RBP25.37■■□□□ 1.65
GMDS-208ENST00000530927 TOGARAM1Q9Y4F4 1720 aa25.37■■□□□ 1.65
GMDS-208ENST00000530927 COL3A1P02461 1466 aaPredicted RBP25.37■■□□□ 1.65
GMDS-208ENST00000530927 RGPD3A6NKT7 1758 aaPredicted RBP25.37■■□□□ 1.65
GMDS-208ENST00000530927 RGPD4Q7Z3J3 1758 aa25.37■■□□□ 1.65
GMDS-208ENST00000530927 PARD3Q8TEW0 1356 aa25.36■■□□□ 1.65
GMDS-208ENST00000530927 PLSCR1O15162 318 aa25.36■■□□□ 1.65
GMDS-208ENST00000530927 DDX10Q13206 875 aaKnown RBP25.36■■□□□ 1.65
GMDS-208ENST00000530927 SULT6B1Q6IMI4 303 aa25.36■■□□□ 1.65
GMDS-208ENST00000530927 R3HDM1Q15032 1099 aaKnown RBP25.34■■□□□ 1.65
GMDS-208ENST00000530927 HMOX1P09601 288 aa25.32■■□□□ 1.64
GMDS-208ENST00000530927 PPP2R1AP30153 589 aa25.32■■□□□ 1.64
GMDS-208ENST00000530927 SPG7Q9UQ90 795 aa25.32■■□□□ 1.64
GMDS-208ENST00000530927 TXNRD1Q16881 649 aa25.31■■□□□ 1.64
GMDS-208ENST00000530927 DIAPH1O60610 1272 aaKnown RBP25.3■■□□□ 1.64
GMDS-208ENST00000530927 ANO8Q9HCE9 1232 aaPredicted RBP25.3■■□□□ 1.64
GMDS-208ENST00000530927 KDRP35968 1356 aa25.3■■□□□ 1.64
GMDS-208ENST00000530927 PHKG2P15735 406 aa25.29■■□□□ 1.64
GMDS-208ENST00000530927 KCNQ4P56696 695 aa25.28■■□□□ 1.64
GMDS-208ENST00000530927 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.28■■□□□ 1.641e-14■□□□□ 9.5
GMDS-208ENST00000530927 ITGB4P16144 1822 aa25.27■■□□□ 1.64
GMDS-208ENST00000530927 NKX1-1Q15270 411 aaPredicted RBP25.26■■□□□ 1.63
GMDS-208ENST00000530927 MPRIPQ6WCQ1 1025 aa25.26■■□□□ 1.63
GMDS-208ENST00000530927 U2SURPO15042 1029 aaKnown RBP25.25■■□□□ 1.63
GMDS-208ENST00000530927 IFNL2Q8IZJ0 200 aa25.25■■□□□ 1.63
GMDS-208ENST00000530927 LRRC4BQ9NT99 713 aa25.25■■□□□ 1.63
GMDS-208ENST00000530927 ZNF530Q6P9A1 599 aaPredicted RBP25.24■■□□□ 1.63
GMDS-208ENST00000530927 PLEKHO1Q53GL0 409 aaPredicted RBP25.23■■□□□ 1.63
GMDS-208ENST00000530927 PAPPAQ13219 1627 aa25.22■■□□□ 1.63
GMDS-208ENST00000530927 LY75O60449 1722 aa25.22■■□□□ 1.63
GMDS-208ENST00000530927 NBPF14Q5TI25 921 aa25.21■■□□□ 1.63
GMDS-208ENST00000530927 KDM6AO15550 1401 aaPredicted RBP25.21■■□□□ 1.63
GMDS-208ENST00000530927 PIGBQ92521 554 aa25.2■■□□□ 1.63
GMDS-208ENST00000530927 PDGFDQ9GZP0 370 aaPredicted RBP25.2■■□□□ 1.62
GMDS-208ENST00000530927 PLEKHG2Q9H7P9 1386 aa25.19■■□□□ 1.62
GMDS-208ENST00000530927 AMOTQ4VCS5 1084 aa25.19■■□□□ 1.62
GMDS-208ENST00000530927 CFAP53Q96M91 514 aa25.19■■□□□ 1.62
GMDS-208ENST00000530927 ZNF827Q17R98 1081 aa25.17■■□□□ 1.62
GMDS-208ENST00000530927 PALLDQ8WX93 1383 aa25.16■■□□□ 1.62
GMDS-208ENST00000530927 MTHFSDQ2M296 383 aaKnown RBP25.15■■□□□ 1.62
GMDS-208ENST00000530927 TMOD3Q9NYL9 352 aa25.15■■□□□ 1.62
GMDS-208ENST00000530927 C1orf141Q5JVX7 400 aa25.14■■□□□ 1.62
GMDS-208ENST00000530927 SLC15A2Q16348 729 aa25.13■■□□□ 1.61
GMDS-208ENST00000530927 DCAF5Q96JK2 942 aa25.13■■□□□ 1.61
GMDS-208ENST00000530927 CCNL1Q9UK58 526 aaPredicted RBP25.13■■□□□ 1.61
GMDS-208ENST00000530927 ASAP1Q9ULH1 1129 aa25.13■■□□□ 1.61
GMDS-208ENST00000530927 RSPH6AQ9H0K4 717 aa25.12■■□□□ 1.61
GMDS-208ENST00000530927 STK32BQ9NY57 414 aa25.12■■□□□ 1.61
GMDS-208ENST00000530927 CASZ1Q86V15 1759 aa25.12■■□□□ 1.61
GMDS-208ENST00000530927 SLC27A3Q5K4L6 730 aa25.12■■□□□ 1.61
GMDS-208ENST00000530927 U2AF1L5P0DN76 240 aaPredicted RBP25.11■■□□□ 1.61
GMDS-208ENST00000530927 U2AF1Q01081 240 aaKnown RBP eCLIP25.11■■□□□ 1.61
GMDS-208ENST00000530927 PHACTR3Q96KR7 559 aa25.11■■□□□ 1.61
GMDS-208ENST00000530927 LGR6Q9HBX8 967 aa25.11■■□□□ 1.61
GMDS-208ENST00000530927 HSP90AB1P08238 724 aaKnown RBP25.1■■□□□ 1.61
GMDS-208ENST00000530927 PRKAR2BP31323 418 aa25.1■■□□□ 1.61
GMDS-208ENST00000530927 AKAP4Q5JQC9 854 aa25.1■■□□□ 1.61
GMDS-208ENST00000530927 ATG3Q9NT62 314 aa25.1■■□□□ 1.61
GMDS-208ENST00000530927 SCN11AQ9UI33 1791 aa25.1■■□□□ 1.61
GMDS-208ENST00000530927 TUBGCP6Q96RT7 1819 aa25.09■■□□□ 1.61
GMDS-208ENST00000530927 ERVV-2B6SEH9 535 aa25.09■■□□□ 1.61
GMDS-208ENST00000530927 AKT1S1Q96B36 256 aa25.09■■□□□ 1.61
GMDS-208ENST00000530927 VIRMAQ69YN4 1812 aaKnown RBP25.08■■□□□ 1.61
GMDS-208ENST00000530927 C5P01031 1676 aa25.08■■□□□ 1.61
GMDS-208ENST00000530927 LRP5O75197 1615 aa25.08■■□□□ 1.61
GMDS-208ENST00000530927 CABP4P57796 275 aa25.08■■□□□ 1.61
GMDS-208ENST00000530927 RALBP1Q15311 655 aa25.08■■□□□ 1.61
GMDS-208ENST00000530927 NUDCQ9Y266 331 aa25.08■■□□□ 1.61
GMDS-208ENST00000530927 ZNF316A6NFI3 1004 aaPredicted RBP25.07■■□□□ 1.6
GMDS-208ENST00000530927 NFATC2IPQ8NCF5 419 aa25.06■■□□□ 1.6
GMDS-208ENST00000530927 TAF1LQ8IZX4 1826 aa25.06■■□□□ 1.6
GMDS-208ENST00000530927 SMARCC1Q92922 1105 aaPredicted RBP25.05■■□□□ 1.6
GMDS-208ENST00000530927 RNMTO43148 476 aaKnown RBP25.04■■□□□ 1.6
GMDS-208ENST00000530927 ZBTB7AO95365 584 aa25.04■■□□□ 1.6
GMDS-208ENST00000530927 ADAMTS7Q9UKP4 1686 aa25.04■■□□□ 1.6
GMDS-208ENST00000530927 MYBBP1AQ9BQG0 1328 aaKnown RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms