RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 SIRT2Q8IXJ6 389 aa21.56■■□□□ 1.04
BRCA2-204ENST00000530893 ANTXR1Q9H6X2 564 aa21.55■■□□□ 1.04
BRCA2-204ENST00000530893 HTATSF1O43719 755 aaKnown RBP21.55■■□□□ 1.04
BRCA2-204ENST00000530893 GAS2L2Q8NHY3 880 aa21.55■■□□□ 1.04
BRCA2-204ENST00000530893 RTF1Q92541 710 aaKnown RBP21.55■■□□□ 1.04
BRCA2-204ENST00000530893 C1orf115Q9H7X2 142 aa21.55■■□□□ 1.04
BRCA2-204ENST00000530893 CEP170BQ9Y4F5 1589 aaPredicted RBP21.55■■□□□ 1.04
BRCA2-204ENST00000530893 RGS12O14924 1447 aa21.54■■□□□ 1.04
BRCA2-204ENST00000530893 FRAT2O75474 233 aaPredicted RBP21.54■■□□□ 1.04
BRCA2-204ENST00000530893 AMPHP49418 695 aa21.54■■□□□ 1.04
BRCA2-204ENST00000530893 RBM25P49756 843 aaKnown RBP21.54■■□□□ 1.04
BRCA2-204ENST00000530893 EIF5BO60841 1220 aaKnown RBP21.53■■□□□ 1.04
BRCA2-204ENST00000530893 MTHFSDQ2M296 383 aaKnown RBP21.51■■□□□ 1.03
BRCA2-204ENST00000530893 RPAP2Q8IXW5 612 aaPredicted RBP21.51■■□□□ 1.03
BRCA2-204ENST00000530893 SOX12O15370 315 aa21.51■■□□□ 1.03
BRCA2-204ENST00000530893 DCTPP1Q9H773 170 aa21.51■■□□□ 1.03
BRCA2-204ENST00000530893 MARF1Q9Y4F3 1742 aaKnown RBP21.51■■□□□ 1.03
BRCA2-204ENST00000530893 KCNA6P17658 529 aa21.5■■□□□ 1.03
BRCA2-204ENST00000530893 EYA1Q99502 592 aa21.5■■□□□ 1.03
BRCA2-204ENST00000530893 NLRP6P59044 892 aa21.5■■□□□ 1.03
BRCA2-204ENST00000530893 LRRC37A3O60309 1634 aa21.49■■□□□ 1.03
BRCA2-204ENST00000530893 ANKRD44Q8N8A2 993 aa21.49■■□□□ 1.03
BRCA2-204ENST00000530893 SLKQ9H2G2 1235 aaPredicted RBP21.49■■□□□ 1.03
BRCA2-204ENST00000530893 ATP10DQ9P241 1426 aa21.48■■□□□ 1.03
BRCA2-204ENST00000530893 KRT24Q2M2I5 525 aa21.48■■□□□ 1.03
BRCA2-204ENST00000530893 TSPYL4Q9UJ04 414 aa21.48■■□□□ 1.03
BRCA2-204ENST00000530893 SOS1Q07889 1333 aaPredicted RBP21.47■■□□□ 1.03
BRCA2-204ENST00000530893 RTL1A6NKG5 1358 aa21.47■■□□□ 1.03
BRCA2-204ENST00000530893 CHD2O14647 1828 aaKnown RBP21.47■■□□□ 1.03
BRCA2-204ENST00000530893 PLPPR3Q6T4P5 718 aa21.46■■□□□ 1.03
BRCA2-204ENST00000530893 HOXC9P31274 260 aa21.46■■□□□ 1.03
BRCA2-204ENST00000530893 SNX21Q969T3 373 aa21.46■■□□□ 1.03
BRCA2-204ENST00000530893 SLC4A2P04920 1241 aa21.45■■□□□ 1.02
BRCA2-204ENST00000530893 HSCBQ8IWL3 235 aa21.45■■□□□ 1.02
BRCA2-204ENST00000530893 BABAM1Q9NWV8 329 aa21.45■■□□□ 1.02
BRCA2-204ENST00000530893 FOXO3O43524 673 aa21.45■■□□□ 1.02
BRCA2-204ENST00000530893 MSH6P52701 1360 aa21.44■■□□□ 1.02
BRCA2-204ENST00000530893 NWD1Q149M9 1564 aa21.44■■□□□ 1.02
BRCA2-204ENST00000530893 ZNF142P52746 1687 aaPredicted RBP21.44■■□□□ 1.02
BRCA2-204ENST00000530893 GNAT3A8MTJ3 354 aa21.43■■□□□ 1.02
BRCA2-204ENST00000530893 CCT4P50991 539 aaKnown RBP21.43■■□□□ 1.02
BRCA2-204ENST00000530893 CEP85Q6P2H3 762 aa21.43■■□□□ 1.02
BRCA2-204ENST00000530893 ABTB2Q8N961 1025 aa21.43■■□□□ 1.02
BRCA2-204ENST00000530893 CACNA1FO60840 1977 aa21.42■■□□□ 1.02
BRCA2-204ENST00000530893 CDC45O75419 566 aa21.42■■□□□ 1.02
BRCA2-204ENST00000530893 TBC1D9Q6ZT07 1266 aa21.41■■□□□ 1.02
BRCA2-204ENST00000530893 ANKLE2Q86XL3 938 aa21.41■■□□□ 1.02
BRCA2-204ENST00000530893 PLEKHM2Q8IWE5 1019 aa21.41■■□□□ 1.02
BRCA2-204ENST00000530893 CHMP5Q9NZZ3 219 aa21.41■■□□□ 1.02
BRCA2-204ENST00000530893 NCOA3Q9Y6Q9 1424 aa21.4■■□□□ 1.02
BRCA2-204ENST00000530893 STK31Q9BXU1 1019 aa21.4■■□□□ 1.02
BRCA2-204ENST00000530893 MAP3K5Q99683 1374 aa21.4■■□□□ 1.02
BRCA2-204ENST00000530893 HMMRO75330 724 aa21.39■■□□□ 1.02
BRCA2-204ENST00000530893 PHF8Q9UPP1 1060 aa21.39■■□□□ 1.02
BRCA2-204ENST00000530893 MIS18AQ9NYP9 233 aa21.39■■□□□ 1.01
BRCA2-204ENST00000530893 CCDC30Q5VVM6 783 aa21.38■■□□□ 1.01
BRCA2-204ENST00000530893 FAM208AQ9UK61 1670 aaKnown RBP21.38■■□□□ 1.01
BRCA2-204ENST00000530893 TTC22Q5TAA0 569 aa21.38■■□□□ 1.01
BRCA2-204ENST00000530893 MEIS3Q99687 375 aa21.38■■□□□ 1.01
BRCA2-204ENST00000530893 LTN1O94822 1766 aa21.37■■□□□ 1.01
BRCA2-204ENST00000530893 GSPT1P15170 499 aaKnown RBP21.36■■□□□ 1.01
BRCA2-204ENST00000530893 PHRF1Q9P1Y6 1649 aaKnown RBP21.36■■□□□ 1.01
BRCA2-204ENST00000530893 ADGRL3Q9HAR2 1447 aa21.35■■□□□ 1.01
BRCA2-204ENST00000530893 N4BP2Q86UW6 1770 aaPredicted RBP21.35■■□□□ 1.01
BRCA2-204ENST00000530893 TAF7Q15545 349 aaPredicted RBP21.34■■□□□ 1.01
BRCA2-204ENST00000530893 NFAT5O94916 1531 aa21.34■■□□□ 1.01
BRCA2-204ENST00000530893 NUTM2GQ5VZR2 741 aa21.34■■□□□ 1.01
BRCA2-204ENST00000530893 G2E3Q7L622 706 aa21.34■■□□□ 1.01
BRCA2-204ENST00000530893 IP6K1Q92551 441 aa21.34■■□□□ 1.01
BRCA2-204ENST00000530893 KIF2CQ99661 725 aa21.34■■□□□ 1.01
BRCA2-204ENST00000530893 KCNH5Q8NCM2 988 aa21.33■■□□□ 1.01
BRCA2-204ENST00000530893 PXDNLA1KZ92 1463 aa21.33■■□□□ 1.01
BRCA2-204ENST00000530893 IL17REQ8NFR9 667 aa21.33■■□□□ 1
BRCA2-204ENST00000530893 CIZ1Q9ULV3 898 aaPredicted RBP21.33■■□□□ 1
BRCA2-204ENST00000530893 GNAI2P04899 355 aa21.32■■□□□ 1
BRCA2-204ENST00000530893 DDIT3P35638 169 aa21.32■■□□□ 1
BRCA2-204ENST00000530893 FLIIQ13045 1269 aa21.32■■□□□ 1
BRCA2-204ENST00000530893 SETD1BQ9UPS6 1966 aaKnown RBP21.32■■□□□ 1
BRCA2-204ENST00000530893 GNAI3P08754 354 aa21.31■■□□□ 1
BRCA2-204ENST00000530893 SLC4A10Q6U841 1118 aa21.31■■□□□ 1
BRCA2-204ENST00000530893 CHMP4AQ9BY43 222 aa21.31■■□□□ 1
BRCA2-204ENST00000530893 MCM4P33991 863 aa21.31■■□□□ 1
BRCA2-204ENST00000530893 CASC1Q6TDU7 716 aa21.31■■□□□ 1
BRCA2-204ENST00000530893 SPRYD3Q8NCJ5 442 aa21.31■■□□□ 1
BRCA2-204ENST00000530893 OSBPL3Q9H4L5 887 aa21.3■■□□□ 1
BRCA2-204ENST00000530893 CEMIPQ8WUJ3 1361 aa21.3■■□□□ 1
BRCA2-204ENST00000530893 F6X3S4 739 aa21.29■■□□□ 1
BRCA2-204ENST00000530893 C14orf37Q86TY3 774 aa21.29■■□□□ 1
BRCA2-204ENST00000530893 HSP90AB1P08238 724 aaKnown RBP21.29■■□□□ 1
BRCA2-204ENST00000530893 FKBP5Q13451 457 aaPredicted RBP21.28■■□□□ 1
BRCA2-204ENST00000530893 C16orf71Q8IYS4 520 aaPredicted RBP21.28■■□□□ 1
BRCA2-204ENST00000530893 MED1Q15648 1581 aaPredicted RBP21.28■■□□□ 1
BRCA2-204ENST00000530893 PSME1Q06323 249 aa21.28■■□□□ 1
BRCA2-204ENST00000530893 LTV1Q96GA3 475 aaPredicted RBP21.28■■□□□ 1
BRCA2-204ENST00000530893 ADAMTSL3P82987 1691 aa21.27■■□□□ 1
BRCA2-204ENST00000530893 K7ELQ4 463 aaPredicted RBP21.27■■□□□ 1
BRCA2-204ENST00000530893 HOXB7P09629 217 aa21.26■□□□□ 0.99
BRCA2-204ENST00000530893 SDSP20132 328 aa21.26■□□□□ 0.99
BRCA2-204ENST00000530893 RABEP1Q15276 862 aa21.25■□□□□ 0.99
BRCA2-204ENST00000530893 ESCO1Q5FWF5 840 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms