RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 AFF2P51816 1311 aa6.9□□□□□ -1.3
CTNND1-226ENST00000530720 CDC42BPGQ6DT37 1551 aa6.9□□□□□ -1.31
CTNND1-226ENST00000530720 NUTM2BA6NNL0 878 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-226ENST00000530720 NUTM2EB1AL46 878 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-226ENST00000530720 C3orf80F5H4A9 247 aa6.89□□□□□ -1.31
CTNND1-226ENST00000530720 OSBPP22059 807 aa6.89□□□□□ -1.31
CTNND1-226ENST00000530720 ZNF326Q5BKZ1 582 aaKnown RBP6.89□□□□□ -1.31
CTNND1-226ENST00000530720 NUTM2AQ8IVF1 878 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-226ENST00000530720 TATDN2Q93075 761 aa6.89□□□□□ -1.31
CTNND1-226ENST00000530720 SOS2Q07890 1332 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-226ENST00000530720 SPATA31E1Q6ZUB1 1445 aa6.89□□□□□ -1.31
CTNND1-226ENST00000530720 KNDC1Q76NI1 1749 aa6.88□□□□□ -1.31
CTNND1-226ENST00000530720 MYOM2P54296 1465 aa6.88□□□□□ -1.31
CTNND1-226ENST00000530720 PXDNQ92626 1479 aa6.88□□□□□ -1.31
CTNND1-226ENST00000530720 TECPR2O15040 1411 aa6.88□□□□□ -1.31
CTNND1-226ENST00000530720 NBPF26B4DH59 902 aa6.88□□□□□ -1.31
CTNND1-226ENST00000530720 MEX3CQ5U5Q3 659 aaKnown RBP6.88□□□□□ -1.31
CTNND1-226ENST00000530720 LRRC59Q96AG4 307 aaKnown RBP6.88□□□□□ -1.31
CTNND1-226ENST00000530720 ORAI2Q96SN7 254 aa6.88□□□□□ -1.31
CTNND1-226ENST00000530720 PNMA3Q9UL41 463 aa6.88□□□□□ -1.31
CTNND1-226ENST00000530720 MARF1Q9Y4F3 1742 aaKnown RBP6.87□□□□□ -1.31
CTNND1-226ENST00000530720 RXRBP28702 533 aa6.87□□□□□ -1.31
CTNND1-226ENST00000530720 CDHR5Q9HBB8 845 aa6.87□□□□□ -1.31
CTNND1-226ENST00000530720 RBM27Q9P2N5 1060 aaKnown RBP6.87□□□□□ -1.31
CTNND1-226ENST00000530720 TJAP1Q5JTD0 557 aa6.86□□□□□ -1.31
CTNND1-226ENST00000530720 C8orf37Q96NL8 207 aa6.86□□□□□ -1.31
CTNND1-226ENST00000530720 FMN2Q9NZ56 1722 aa6.86□□□□□ -1.31
CTNND1-226ENST00000530720 BCL9LQ86UU0 1499 aa6.85□□□□□ -1.31
CTNND1-226ENST00000530720 PIK3C2GO75747 1445 aa6.85□□□□□ -1.31
CTNND1-226ENST00000530720 ATRNO75882 1429 aa6.85□□□□□ -1.31
CTNND1-226ENST00000530720 PLEKHH1Q9ULM0 1364 aa6.85□□□□□ -1.31
CTNND1-226ENST00000530720 RPGRIP1LQ68CZ1 1315 aa6.85□□□□□ -1.31
CTNND1-226ENST00000530720 ADGRF5Q8IZF2 1346 aa6.85□□□□□ -1.31
CTNND1-226ENST00000530720 NUDT18Q6ZVK8 323 aa6.85□□□□□ -1.31
CTNND1-226ENST00000530720 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.84□□□□□ -1.31
CTNND1-226ENST00000530720 EP400Q96L91 3159 aa6.84□□□□□ -1.31
CTNND1-226ENST00000530720 ADAMTS2O95450 1211 aa6.84□□□□□ -1.31
CTNND1-226ENST00000530720 RBM6P78332 1123 aaKnown RBP6.84□□□□□ -1.31
CTNND1-226ENST00000530720 FNBP4Q8N3X1 1017 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-226ENST00000530720 QTRT2Q9H974 415 aaKnown RBP6.84□□□□□ -1.31
CTNND1-226ENST00000530720 NRXN1Q9ULB1 1477 aa6.84□□□□□ -1.31
CTNND1-226ENST00000530720 LRPPRCP42704 1394 aaKnown RBP6.83□□□□□ -1.32
CTNND1-226ENST00000530720 GLI3P10071 1580 aa6.83□□□□□ -1.32
CTNND1-226ENST00000530720 TTC13Q8NBP0 860 aa6.83□□□□□ -1.32
CTNND1-226ENST00000530720 MTRQ99707 1265 aa6.83□□□□□ -1.32
CTNND1-226ENST00000530720 IL21Q9HBE4 155 aa6.83□□□□□ -1.32
CTNND1-226ENST00000530720 NPDC1Q9NQX5 325 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-226ENST00000530720 ABCA3Q99758 1704 aa6.83□□□□□ -1.32
CTNND1-226ENST00000530720 KIF1AQ12756 1690 aa6.83□□□□□ -1.32
CTNND1-226ENST00000530720 USP32Q8NFA0 1604 aa6.83□□□□□ -1.32
CTNND1-226ENST00000530720 ABCC11Q96J66 1382 aa6.82□□□□□ -1.32
CTNND1-226ENST00000530720 RGPD8O14715 1765 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-226ENST00000530720 SLIT2O94813 1529 aa6.82□□□□□ -1.32
CTNND1-226ENST00000530720 Q6ZNB5 142 aa6.82□□□□□ -1.32
CTNND1-226ENST00000530720 NGLY1Q96IV0 654 aa6.82□□□□□ -1.32
CTNND1-226ENST00000530720 CCDC144AA2RUR9 1427 aa6.82□□□□□ -1.32
CTNND1-226ENST00000530720 XPCQ01831 940 aaPredicted RBP6.81□□□□□ -1.32
CTNND1-226ENST00000530720 WAPLQ7Z5K2 1190 aa6.81□□□□□ -1.32
CTNND1-226ENST00000530720 USP21Q9UK80 565 aa6.81□□□□□ -1.32
CTNND1-226ENST00000530720 YTHDC2Q9H6S0 1430 aaKnown RBP6.81□□□□□ -1.32
CTNND1-226ENST00000530720 ADGRB1O14514 1584 aa6.81□□□□□ -1.32
CTNND1-226ENST00000530720 ANKRD30BQ9BXX2 1392 aa6.81□□□□□ -1.32
CTNND1-226ENST00000530720 NPHP3Q7Z494 1330 aa6.8□□□□□ -1.32
CTNND1-226ENST00000530720 FOXO3O43524 673 aa6.8□□□□□ -1.32
CTNND1-226ENST00000530720 ADGRB2O60241 1585 aa6.8□□□□□ -1.32
CTNND1-226ENST00000530720 RNF40O75150 1001 aa6.8□□□□□ -1.32
CTNND1-226ENST00000530720 APLP1P51693 650 aa6.8□□□□□ -1.32
CTNND1-226ENST00000530720 LAPTM4AQ15012 233 aa6.8□□□□□ -1.32
CTNND1-226ENST00000530720 ESCO1Q5FWF5 840 aa6.8□□□□□ -1.32
CTNND1-226ENST00000530720 TMEM132EQ6IEE7 984 aa6.8□□□□□ -1.32
CTNND1-226ENST00000530720 PADI6Q6TGC4 694 aa6.8□□□□□ -1.32
CTNND1-226ENST00000530720 SRCAPQ6ZRS2 3230 aa6.8□□□□□ -1.32
CTNND1-226ENST00000530720 NECTIN2Q92692 538 aa6.8□□□□□ -1.32
CTNND1-226ENST00000530720 MPHOSPH9Q99550 1183 aa6.8□□□□□ -1.32
CTNND1-226ENST00000530720 TRPC5Q9UL62 973 aaPredicted RBP6.8□□□□□ -1.32
CTNND1-226ENST00000530720 BRWD3Q6RI45 1802 aa6.8□□□□□ -1.32
CTNND1-226ENST00000530720 PLCH1Q4KWH8 1693 aa6.8□□□□□ -1.32
CTNND1-226ENST00000530720 ATAD2Q6PL18 1390 aa6.8□□□□□ -1.32
CTNND1-226ENST00000530720 RALGAPBQ86X10 1494 aa6.79□□□□□ -1.32
CTNND1-226ENST00000530720 SPATA31A3Q5VYP0 1347 aa6.79□□□□□ -1.32
CTNND1-226ENST00000530720 NRAPQ86VF7 1730 aa6.79□□□□□ -1.32
CTNND1-226ENST00000530720 TRPM3Q9HCF6 1732 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-226ENST00000530720 CRYBG1Q9Y4K1 1723 aa6.79□□□□□ -1.32
CTNND1-226ENST00000530720 NUTM2FA1L443 756 aa6.79□□□□□ -1.32
CTNND1-226ENST00000530720 RGL3Q3MIN7 710 aa6.79□□□□□ -1.32
CTNND1-226ENST00000530720 SWT1Q5T5J6 900 aaKnown RBP6.79□□□□□ -1.32
CTNND1-226ENST00000530720 PPP1R18Q6NYC8 613 aa6.79□□□□□ -1.32
CTNND1-226ENST00000530720 ZNF516Q92618 1163 aa6.79□□□□□ -1.32
CTNND1-226ENST00000530720 STK26Q9P289 416 aa6.79□□□□□ -1.32
CTNND1-226ENST00000530720 DLC1Q96QB1 1528 aa6.79□□□□□ -1.32
CTNND1-226ENST00000530720 TNS3Q68CZ2 1445 aa6.78□□□□□ -1.32
CTNND1-226ENST00000530720 SLF2Q8IX21 1173 aa6.78□□□□□ -1.32
CTNND1-226ENST00000530720 PRKD2Q9BZL6 878 aa6.78□□□□□ -1.32
CTNND1-226ENST00000530720 C14orf93Q9H972 538 aaKnown RBP6.78□□□□□ -1.32
CTNND1-226ENST00000530720 NWD2Q9ULI1 1742 aa6.78□□□□□ -1.32
CTNND1-226ENST00000530720 ALS2Q96Q42 1657 aa6.77□□□□□ -1.32
CTNND1-226ENST00000530720 GFRA3O60609 400 aa6.77□□□□□ -1.33
CTNND1-226ENST00000530720 ARHGEF1Q92888 912 aaKnown RBP6.77□□□□□ -1.33
CTNND1-226ENST00000530720 SIRT1Q96EB6 747 aa6.77□□□□□ -1.33
CTNND1-226ENST00000530720 GJD4Q96KN9 370 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms