RNA–Protein interactions for RNA: ENST00000530426.1

LTBP3-216, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-216ENST00000530426 A0A0G2JS52 829 aa20.26■□□□□ 0.83
LTBP3-216ENST00000530426 MYT1Q01538 1121 aa20.26■□□□□ 0.83
LTBP3-216ENST00000530426 GJD4Q96KN9 370 aaPredicted RBP20.26■□□□□ 0.83
LTBP3-216ENST00000530426 RRP7AQ9Y3A4 280 aaKnown RBP20.26■□□□□ 0.83
LTBP3-216ENST00000530426 MEGF6O75095 1541 aa20.26■□□□□ 0.83
LTBP3-216ENST00000530426 ATRNO75882 1429 aa20.26■□□□□ 0.83
LTBP3-216ENST00000530426 FAM98CQ17RN3 349 aaKnown RBP20.25■□□□□ 0.83
LTBP3-216ENST00000530426 SPG7Q9UQ90 795 aa20.25■□□□□ 0.83
LTBP3-216ENST00000530426 MTHFSDQ2M296 383 aaKnown RBP20.24■□□□□ 0.83
LTBP3-216ENST00000530426 AMOTQ4VCS5 1084 aa20.24■□□□□ 0.83
LTBP3-216ENST00000530426 GAS2L2Q8NHY3 880 aa20.24■□□□□ 0.83
LTBP3-216ENST00000530426 PARP4Q9UKK3 1724 aaKnown RBP20.24■□□□□ 0.83
LTBP3-216ENST00000530426 TMPOP42166 694 aaKnown RBP20.23■□□□□ 0.83
LTBP3-216ENST00000530426 NFE2L2Q16236 605 aa20.23■□□□□ 0.83
LTBP3-216ENST00000530426 BARGINQ6ZT62 677 aa20.23■□□□□ 0.83
LTBP3-216ENST00000530426 CDCA7Q9BWT1 371 aaPredicted RBP20.23■□□□□ 0.83
LTBP3-216ENST00000530426 RIPK4P57078 832 aa20.22■□□□□ 0.83
LTBP3-216ENST00000530426 ZNF530Q6P9A1 599 aaPredicted RBP20.22■□□□□ 0.83
LTBP3-216ENST00000530426 ZCRB1Q8TBF4 217 aaKnown RBP20.22■□□□□ 0.83
LTBP3-216ENST00000530426 OVOS2A0A0G2JMS6 1433 aa20.21■□□□□ 0.83
LTBP3-216ENST00000530426 C1orf141Q5JVX7 400 aa20.21■□□□□ 0.83
LTBP3-216ENST00000530426 WNK3Q9BYP7 1800 aa20.2■□□□□ 0.82
LTBP3-216ENST00000530426 EXOC5O00471 708 aa20.2■□□□□ 0.82
LTBP3-216ENST00000530426 GLI3P10071 1580 aa20.2■□□□□ 0.82
LTBP3-216ENST00000530426 DISP2A7MBM2 1401 aa20.19■□□□□ 0.82
LTBP3-216ENST00000530426 DDB1Q16531 1140 aa20.19■□□□□ 0.82
LTBP3-216ENST00000530426 DDX54Q8TDD1 881 aaKnown RBP20.19■□□□□ 0.82
LTBP3-216ENST00000530426 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.19■□□□□ 0.82
LTBP3-216ENST00000530426 RBM6P78332 1123 aaKnown RBP20.18■□□□□ 0.82
LTBP3-216ENST00000530426 LMOD3Q0VAK6 560 aa20.17■□□□□ 0.82
LTBP3-216ENST00000530426 AKAP4Q5JQC9 854 aa20.17■□□□□ 0.82
LTBP3-216ENST00000530426 RTF1Q92541 710 aaKnown RBP20.17■□□□□ 0.82
LTBP3-216ENST00000530426 RGS17Q9UGC6 210 aaPredicted RBP20.17■□□□□ 0.82
LTBP3-216ENST00000530426 PCDH11XQ9BZA7 1347 aa20.17■□□□□ 0.82
LTBP3-216ENST00000530426 PCDH11YQ9BZA8 1340 aa20.17■□□□□ 0.82
LTBP3-216ENST00000530426 GNAT3A8MTJ3 354 aa20.16■□□□□ 0.82
LTBP3-216ENST00000530426 RXRBP28702 533 aa20.16■□□□□ 0.82
LTBP3-216ENST00000530426 IFNL2Q8IZJ0 200 aa20.16■□□□□ 0.82
LTBP3-216ENST00000530426 PLEKHG2Q9H7P9 1386 aa20.16■□□□□ 0.82
LTBP3-216ENST00000530426 PKD1L3Q7Z443 1732 aa20.16■□□□□ 0.82
LTBP3-216ENST00000530426 NGEFQ8N5V2 710 aa20.15■□□□□ 0.82
LTBP3-216ENST00000530426 MAP3K5Q99683 1374 aa20.15■□□□□ 0.82
LTBP3-216ENST00000530426 PHKG2P15735 406 aa20.14■□□□□ 0.81
LTBP3-216ENST00000530426 PDE3BQ13370 1112 aa20.14■□□□□ 0.81
LTBP3-216ENST00000530426 SEPT12Q8IYM1 358 aa20.14■□□□□ 0.81
LTBP3-216ENST00000530426 TNS2Q63HR2 1409 aa20.13■□□□□ 0.81
LTBP3-216ENST00000530426 DCTN1Q14203 1278 aa20.13■□□□□ 0.81
LTBP3-216ENST00000530426 POTEAQ6S8J7 498 aa20.13■□□□□ 0.81
LTBP3-216ENST00000530426 DLG5Q8TDM6 1919 aa20.13■□□□□ 0.81
LTBP3-216ENST00000530426 LRRC37A3O60309 1634 aa20.13■□□□□ 0.81
LTBP3-216ENST00000530426 CYP27B1O15528 508 aa20.12■□□□□ 0.81
LTBP3-216ENST00000530426 HSP90AB1P08238 724 aaKnown RBP20.12■□□□□ 0.81
LTBP3-216ENST00000530426 MPRIPQ6WCQ1 1025 aa20.12■□□□□ 0.81
LTBP3-216ENST00000530426 MCM10Q7L590 875 aa20.12■□□□□ 0.81
LTBP3-216ENST00000530426 TRIM35Q9UPQ4 493 aa20.12■□□□□ 0.81
LTBP3-216ENST00000530426 HTATSF1O43719 755 aaKnown RBP20.11■□□□□ 0.81
LTBP3-216ENST00000530426 ONECUT3O60422 494 aaPredicted RBP20.11■□□□□ 0.81
LTBP3-216ENST00000530426 CCDC27Q2M243 656 aa20.11■□□□□ 0.81
LTBP3-216ENST00000530426 WWC1Q8IX03 1113 aa20.11■□□□□ 0.81
LTBP3-216ENST00000530426 THSD7AQ9UPZ6 1657 aa20.1■□□□□ 0.81
LTBP3-216ENST00000530426 NCBP3Q53F19 620 aaKnown RBP20.1■□□□□ 0.81
LTBP3-216ENST00000530426 THUMPD2Q9BTF0 503 aaKnown RBP20.1■□□□□ 0.81
LTBP3-216ENST00000530426 SHANK3Q9BYB0 1731 aa20.1■□□□□ 0.81
LTBP3-216ENST00000530426 ZBED9Q6R2W3 1325 aa20.09■□□□□ 0.81
LTBP3-216ENST00000530426 RNMTO43148 476 aaKnown RBP20.08■□□□□ 0.81
LTBP3-216ENST00000530426 DCAF5Q96JK2 942 aa20.08■□□□□ 0.81
LTBP3-216ENST00000530426 LGR6Q9HBX8 967 aa20.08■□□□□ 0.81
LTBP3-216ENST00000530426 LAS1LQ9Y4W2 734 aaKnown RBP20.08■□□□□ 0.81
LTBP3-216ENST00000530426 CALD1Q05682 793 aaKnown RBP20.07■□□□□ 0.8
LTBP3-216ENST00000530426 MARCH10Q8NA82 808 aaPredicted RBP20.07■□□□□ 0.8
LTBP3-216ENST00000530426 IL17REQ8NFR9 667 aa20.07■□□□□ 0.8
LTBP3-216ENST00000530426 TEFQ10587 303 aa20.06■□□□□ 0.8
LTBP3-216ENST00000530426 GOLGA2Q08379 1002 aa20.05■□□□□ 0.8
LTBP3-216ENST00000530426 NKX1-1Q15270 411 aaPredicted RBP20.05■□□□□ 0.8
LTBP3-216ENST00000530426 WDR63Q8IWG1 891 aa20.05■□□□□ 0.8
LTBP3-216ENST00000530426 KRT27Q7Z3Y8 459 aa20.04■□□□□ 0.8
LTBP3-216ENST00000530426 ZNF521Q96K83 1311 aa20.03■□□□□ 0.8
LTBP3-216ENST00000530426 KDM6AO15550 1401 aaPredicted RBP20.03■□□□□ 0.8
LTBP3-216ENST00000530426 CABP4P57796 275 aa20.03■□□□□ 0.8
LTBP3-216ENST00000530426 FAM182BQ5T319 152 aa20.03■□□□□ 0.8
LTBP3-216ENST00000530426 RGS12O14924 1447 aa20.02■□□□□ 0.79
LTBP3-216ENST00000530426 SCN11AQ9UI33 1791 aa20.01■□□□□ 0.79
LTBP3-216ENST00000530426 SYTL4Q96C24 671 aaPredicted RBP20.01■□□□□ 0.79
LTBP3-216ENST00000530426 CDCA7LQ96GN5 454 aa20.01■□□□□ 0.79
LTBP3-216ENST00000530426 ACSBG1Q96GR2 724 aa20.01■□□□□ 0.79
LTBP3-216ENST00000530426 VIRMAQ69YN4 1812 aaKnown RBP20.01■□□□□ 0.79
LTBP3-216ENST00000530426 BRWD3Q6RI45 1802 aa20■□□□□ 0.79
LTBP3-216ENST00000530426 CEMIPQ8WUJ3 1361 aa20■□□□□ 0.79
LTBP3-216ENST00000530426 ERVV-2B6SEH9 535 aa20■□□□□ 0.79
LTBP3-216ENST00000530426 TAF7Q15545 349 aaPredicted RBP20■□□□□ 0.79
LTBP3-216ENST00000530426 SLC52A2Q9HAB3 445 aa20■□□□□ 0.79
LTBP3-216ENST00000530426 GNAI1P63096 354 aa19.99■□□□□ 0.79
LTBP3-216ENST00000530426 NFATC2IPQ8NCF5 419 aa19.99■□□□□ 0.79
LTBP3-216ENST00000530426 TMOD3Q9NYL9 352 aa19.99■□□□□ 0.79
LTBP3-216ENST00000530426 IL16Q14005 1332 aa19.99■□□□□ 0.79
LTBP3-216ENST00000530426 E9PSI1 815 aa19.98■□□□□ 0.79
LTBP3-216ENST00000530426 MYH16Q9H6N6 1097 aa19.98■□□□□ 0.79
LTBP3-216ENST00000530426 IFT57Q9NWB7 429 aa19.98■□□□□ 0.79
LTBP3-216ENST00000530426 MIS18AQ9NYP9 233 aa19.98■□□□□ 0.79
LTBP3-216ENST00000530426 TSPYL4Q9UJ04 414 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms