RNA–Protein interactions for RNA: ENST00000530275.3

MACF1-230, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-230ENST00000530275 PPP6R1Q9UPN7 881 aa15.23■□□□□ 0.03
MACF1-230ENST00000530275 FAM193AP78312 1265 aa15.23■□□□□ 0.03
MACF1-230ENST00000530275 ATF7IPQ6VMQ6 1270 aa15.23■□□□□ 0.03
MACF1-230ENST00000530275 CEP131Q9UPN4 1083 aa15.23■□□□□ 0.03
MACF1-230ENST00000530275 NEBLO76041 1014 aa15.23■□□□□ 0.03
MACF1-230ENST00000530275 EZRP15311 586 aaKnown RBP15.23■□□□□ 0.03
MACF1-230ENST00000530275 CWC27Q6UX04 472 aaKnown RBP15.23■□□□□ 0.03
MACF1-230ENST00000530275 GRPEL1Q9HAV7 217 aa15.23■□□□□ 0.03
MACF1-230ENST00000530275 CABP1Q9NZU7 370 aa15.23■□□□□ 0.03
MACF1-230ENST00000530275 ZSCAN29Q8IWY8 852 aaPredicted RBP15.22■□□□□ 0.03
MACF1-230ENST00000530275 HSP90AB3PQ58FF7 597 aa15.22■□□□□ 0.03
MACF1-230ENST00000530275 SRGAP3O43295 1099 aa15.22■□□□□ 0.03
MACF1-230ENST00000530275 UPF3BQ9BZI7 483 aaKnown RBP15.22■□□□□ 0.03
MACF1-230ENST00000530275 ERBINQ96RT1 1412 aa15.22■□□□□ 0.03
MACF1-230ENST00000530275 TAF4BQ92750 862 aa15.21■□□□□ 0.03
MACF1-230ENST00000530275 NUTM2BA6NNL0 878 aaPredicted RBP15.21■□□□□ 0.03
MACF1-230ENST00000530275 NUTM2EB1AL46 878 aaPredicted RBP15.21■□□□□ 0.03
MACF1-230ENST00000530275 NUTM2AQ8IVF1 878 aaPredicted RBP15.21■□□□□ 0.03
MACF1-230ENST00000530275 KIAA1328Q86T90 577 aa15.21■□□□□ 0.03
MACF1-230ENST00000530275 IGHMBP2P38935 993 aaKnown RBP15.21■□□□□ 0.02
MACF1-230ENST00000530275 IMMTQ16891 758 aaKnown RBP15.21■□□□□ 0.02
MACF1-230ENST00000530275 BRPF3Q9ULD4 1205 aa15.21■□□□□ 0.02
MACF1-230ENST00000530275 SPINK5Q9NQ38 1064 aaPredicted RBP15.2■□□□□ 0.02
MACF1-230ENST00000530275 PLEKHH2Q8IVE3 1493 aa15.2■□□□□ 0.02
MACF1-230ENST00000530275 EIF5P55010 431 aaKnown RBP15.2■□□□□ 0.02
MACF1-230ENST00000530275 THEMISQ8N1K5 641 aaPredicted RBP15.2■□□□□ 0.02
MACF1-230ENST00000530275 ZNF397Q8NF99 534 aaPredicted RBP15.2■□□□□ 0.02
MACF1-230ENST00000530275 CEP126Q9P2H0 1117 aa15.2■□□□□ 0.02
MACF1-230ENST00000530275 LRP2BPQ9P2M1 347 aa15.2■□□□□ 0.02
MACF1-230ENST00000530275 AKNAQ7Z591 1439 aa15.19■□□□□ 0.02
MACF1-230ENST00000530275 EPB41L2O43491 1005 aaKnown RBP15.19■□□□□ 0.02
MACF1-230ENST00000530275 TRIM21P19474 475 aaKnown RBP15.19■□□□□ 0.02
MACF1-230ENST00000530275 UQCRHLA0A096LP55 91 aa15.19■□□□□ 0.02
MACF1-230ENST00000530275 UQCRHP07919 91 aa15.19■□□□□ 0.02
MACF1-230ENST00000530275 CCDC148Q8NFR7 591 aa15.19■□□□□ 0.02
MACF1-230ENST00000530275 EHBP1L1Q8N3D4 1523 aa15.19■□□□□ 0.02
MACF1-230ENST00000530275 AFAP1Q8N556 730 aa15.19■□□□□ 0.02
MACF1-230ENST00000530275 AIDAQ96BJ3 306 aa15.19■□□□□ 0.02
MACF1-230ENST00000530275 AQRO60306 1485 aaKnown RBP eCLIP15.19■□□□□ 0.021e-6■■■■□ 26.3
MACF1-230ENST00000530275 KIAA1107Q9UPP5 1409 aa15.19■□□□□ 0.02
MACF1-230ENST00000530275 ANKRD30BQ9BXX2 1392 aa15.19■□□□□ 0.02
MACF1-230ENST00000530275 SLC12A5Q9H2X9 1139 aa15.19■□□□□ 0.02
MACF1-230ENST00000530275 POTEJP0CG39 1038 aa15.18■□□□□ 0.02
MACF1-230ENST00000530275 USP5P45974 858 aa15.18■□□□□ 0.02
MACF1-230ENST00000530275 C9orf84Q5VXU9 1444 aa15.18■□□□□ 0.02
MACF1-230ENST00000530275 PDIA4P13667 645 aaKnown RBP15.18■□□□□ 0.02
MACF1-230ENST00000530275 LRRFIP2Q9Y608 721 aaKnown RBP15.18■□□□□ 0.02
MACF1-230ENST00000530275 PIBF1Q8WXW3 757 aa15.18■□□□□ 0.02
MACF1-230ENST00000530275 CASTP20810 708 aaKnown RBP15.17■□□□□ 0.02
MACF1-230ENST00000530275 SSR1P43307 286 aaKnown RBP15.17■□□□□ 0.02
MACF1-230ENST00000530275 NBPF1Q3BBV0 1214 aa15.17■□□□□ 0.02
MACF1-230ENST00000530275 ERICH3Q5RHP9 1530 aa15.17■□□□□ 0.02
MACF1-230ENST00000530275 MPNDQ8N594 471 aa15.17■□□□□ 0.02
MACF1-230ENST00000530275 CIZ1Q9ULV3 898 aaPredicted RBP15.17■□□□□ 0.02
MACF1-230ENST00000530275 SEC63Q9UGP8 760 aaKnown RBP15.17■□□□□ 0.02
MACF1-230ENST00000530275 PPP1R12BO60237 982 aaPredicted RBP15.16■□□□□ 0.02
MACF1-230ENST00000530275 TNIP1Q15025 636 aa15.16■□□□□ 0.02
MACF1-230ENST00000530275 CCDC102AQ96A19 550 aa15.16■□□□□ 0.02
MACF1-230ENST00000530275 IDH1O75874 414 aaKnown RBP15.16■□□□□ 0.02
MACF1-230ENST00000530275 DNAI2Q9GZS0 605 aa15.16■□□□□ 0.02
MACF1-230ENST00000530275 IL1RAPL2Q9NP60 686 aa15.16■□□□□ 0.02
MACF1-230ENST00000530275 BICDL1Q6ZP65 573 aa15.16■□□□□ 0.02
MACF1-230ENST00000530275 NUTM1Q86Y26 1132 aa15.16■□□□□ 0.02
MACF1-230ENST00000530275 BACH2Q9BYV9 841 aa15.16■□□□□ 0.02
MACF1-230ENST00000530275 MAP3K11Q16584 847 aa15.15■□□□□ 0.02
MACF1-230ENST00000530275 RPAP2Q8IXW5 612 aaPredicted RBP15.15■□□□□ 0.02
MACF1-230ENST00000530275 ZNF287Q9HBT7 754 aa15.15■□□□□ 0.02
MACF1-230ENST00000530275 ARHGAP29Q52LW3 1261 aa15.15■□□□□ 0.02
MACF1-230ENST00000530275 ATAD2Q6PL18 1390 aa15.15■□□□□ 0.02
MACF1-230ENST00000530275 GNAT3A8MTJ3 354 aa15.15■□□□□ 0.02
MACF1-230ENST00000530275 RRS1Q15050 365 aaKnown RBP15.15■□□□□ 0.02
MACF1-230ENST00000530275 TMOD2Q9NZR1 351 aa15.15■□□□□ 0.02
MACF1-230ENST00000530275 TSG101Q99816 390 aa15.15■□□□□ 0.02
MACF1-230ENST00000530275 AKAP2Q9Y2D5 859 aa15.14■□□□□ 0.01
MACF1-230ENST00000530275 CFTRP13569 1480 aa15.14■□□□□ 0.01
MACF1-230ENST00000530275 INCENPQ9NQS7 918 aa15.14■□□□□ 0.01
MACF1-230ENST00000530275 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
MACF1-230ENST00000530275 CFAP100Q494V2 611 aa15.14■□□□□ 0.01
MACF1-230ENST00000530275 CCDC91Q7Z6B0 441 aa15.14■□□□□ 0.01
MACF1-230ENST00000530275 DDX11Q96FC9 970 aa15.14■□□□□ 0.01
MACF1-230ENST00000530275 METTL24Q5JXM2 366 aa15.13■□□□□ 0.01
MACF1-230ENST00000530275 FILIP1Q7Z7B0 1213 aa15.13■□□□□ 0.01
MACF1-230ENST00000530275 RAB11FIP3O75154 756 aa15.13■□□□□ 0.01
MACF1-230ENST00000530275 FCHSD2O94868 740 aa15.13■□□□□ 0.01
MACF1-230ENST00000530275 CETN2P41208 172 aa15.13■□□□□ 0.01
MACF1-230ENST00000530275 SPA17Q15506 151 aa15.13■□□□□ 0.01
MACF1-230ENST00000530275 PRG4Q92954 1404 aaPredicted RBP15.13■□□□□ 0.01
MACF1-230ENST00000530275 STARD3NLO95772 234 aa15.13■□□□□ 0.01
MACF1-230ENST00000530275 CAMK4Q16566 473 aa15.13■□□□□ 0.01
MACF1-230ENST00000530275 NFE2L2Q16236 605 aa15.12■□□□□ 0.01
MACF1-230ENST00000530275 FKBP15Q5T1M5 1219 aa15.12■□□□□ 0.01
MACF1-230ENST00000530275 PRDM11Q9NQV5 511 aa15.12■□□□□ 0.01
MACF1-230ENST00000530275 RPGRIP1LQ68CZ1 1315 aa15.12■□□□□ 0.01
MACF1-230ENST00000530275 PPP4R3AQ6IN85 833 aa15.12■□□□□ 0.01
MACF1-230ENST00000530275 USP8P40818 1118 aa15.12■□□□□ 0.01
MACF1-230ENST00000530275 SLC26A8Q96RN1 970 aa15.12■□□□□ 0.01
MACF1-230ENST00000530275 HECW1Q76N89 1606 aa15.12■□□□□ 0.01
MACF1-230ENST00000530275 DHX37Q8IY37 1157 aaKnown RBP15.11■□□□□ 0.01
MACF1-230ENST00000530275 CCDC85AQ96PX6 553 aaPredicted RBP15.11■□□□□ 0.01
MACF1-230ENST00000530275 GBP3Q9H0R5 595 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms