RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 ANO8Q9HCE9 1232 aaPredicted RBP10.89□□□□□ -0.67
CMTM1-214ENST00000530141 PELP1Q8IZL8 1130 aaKnown RBP10.88□□□□□ -0.67
CMTM1-214ENST00000530141 CFAP53Q96M91 514 aa10.88□□□□□ -0.67
CMTM1-214ENST00000530141 POLR3AO14802 1390 aaPredicted RBP10.88□□□□□ -0.67
CMTM1-214ENST00000530141 SPATA31A1Q5TZJ5 1347 aa10.87□□□□□ -0.67
CMTM1-214ENST00000530141 PRR36Q9H6K5 1346 aa10.87□□□□□ -0.67
CMTM1-214ENST00000530141 SMG6Q86US8 1419 aaKnown RBP10.87□□□□□ -0.67
CMTM1-214ENST00000530141 WASLO00401 505 aaPredicted RBP10.87□□□□□ -0.67
CMTM1-214ENST00000530141 SPON1Q9HCB6 807 aa10.87□□□□□ -0.67
CMTM1-214ENST00000530141 PRDM11Q9NQV5 511 aa10.87□□□□□ -0.67
CMTM1-214ENST00000530141 KIAA0232Q92628 1395 aa10.87□□□□□ -0.67
CMTM1-214ENST00000530141 KCNQ2O43526 872 aa10.86□□□□□ -0.67
CMTM1-214ENST00000530141 NUTM2GQ5VZR2 741 aa10.86□□□□□ -0.67
CMTM1-214ENST00000530141 ERICH6BQ5W0A0 696 aa10.86□□□□□ -0.67
CMTM1-214ENST00000530141 MS4A3Q96HJ5 214 aa10.86□□□□□ -0.67
CMTM1-214ENST00000530141 A0A1W2PP64 1363 aa10.86□□□□□ -0.67
CMTM1-214ENST00000530141 SBF2Q86WG5 1849 aa10.86□□□□□ -0.67
CMTM1-214ENST00000530141 ZBTB7AO95365 584 aa10.85□□□□□ -0.67
CMTM1-214ENST00000530141 GSE1Q14687 1217 aa10.85□□□□□ -0.67
CMTM1-214ENST00000530141 IFFO2Q5TF58 517 aa10.85□□□□□ -0.67
CMTM1-214ENST00000530141 FAM196AQ6ZSG2 479 aa10.85□□□□□ -0.67
CMTM1-214ENST00000530141 PTF1AQ7RTS3 328 aa10.85□□□□□ -0.67
CMTM1-214ENST00000530141 NUDCQ9Y266 331 aa10.85□□□□□ -0.67
CMTM1-214ENST00000530141 CHD4Q14839 1912 aa10.85□□□□□ -0.67
CMTM1-214ENST00000530141 PEAK1Q9H792 1746 aa10.84□□□□□ -0.67
CMTM1-214ENST00000530141 MAP3K13O43283 966 aa10.84□□□□□ -0.67
CMTM1-214ENST00000530141 POTEIP0CG38 1075 aa10.84□□□□□ -0.67
CMTM1-214ENST00000530141 ZC3H6P61129 1189 aaKnown RBP10.84□□□□□ -0.67
CMTM1-214ENST00000530141 DCBLD2Q96PD2 775 aa10.84□□□□□ -0.67
CMTM1-214ENST00000530141 LRRC37A3O60309 1634 aa10.84□□□□□ -0.67
CMTM1-214ENST00000530141 NBPF14Q5TI25 921 aa10.83□□□□□ -0.68
CMTM1-214ENST00000530141 PARP4Q9UKK3 1724 aaKnown RBP10.83□□□□□ -0.68
CMTM1-214ENST00000530141 SSH2Q76I76 1423 aa10.83□□□□□ -0.68
CMTM1-214ENST00000530141 ANKARQ7Z5J8 1434 aa10.83□□□□□ -0.68
CMTM1-214ENST00000530141 LMO7Q8WWI1 1683 aa10.82□□□□□ -0.68
CMTM1-214ENST00000530141 NUDT16Q96DE0 195 aaKnown RBP10.82□□□□□ -0.68
CMTM1-214ENST00000530141 CABP1Q9NZU7 370 aa10.82□□□□□ -0.68
CMTM1-214ENST00000530141 EDC4Q6P2E9 1401 aaKnown RBP10.82□□□□□ -0.68
CMTM1-214ENST00000530141 PPIP5K1Q6PFW1 1433 aa10.82□□□□□ -0.68
CMTM1-214ENST00000530141 RGPD3A6NKT7 1758 aaPredicted RBP10.81□□□□□ -0.68
CMTM1-214ENST00000530141 RGPD4Q7Z3J3 1758 aa10.81□□□□□ -0.68
CMTM1-214ENST00000530141 C1QTNF8P60827 252 aa10.81□□□□□ -0.68
CMTM1-214ENST00000530141 LARP1Q6PKG0 1096 aaKnown RBP10.81□□□□□ -0.68
CMTM1-214ENST00000530141 SGIP1Q9BQI5 828 aa10.81□□□□□ -0.68
CMTM1-214ENST00000530141 SUPT16HQ9Y5B9 1047 aaKnown RBP10.81□□□□□ -0.68
CMTM1-214ENST00000530141 WNK3Q9BYP7 1800 aa10.81□□□□□ -0.68
CMTM1-214ENST00000530141 CD163L1Q9NR16 1453 aa10.81□□□□□ -0.68
CMTM1-214ENST00000530141 UTRNP46939 3433 aa10.8□□□□□ -0.68
CMTM1-214ENST00000530141 PNNQ9H307 717 aaKnown RBP10.8□□□□□ -0.68
CMTM1-214ENST00000530141 ADAMTS8Q9UP79 889 aa10.8□□□□□ -0.68
CMTM1-214ENST00000530141 CPSF1Q10570 1443 aaKnown RBP10.8□□□□□ -0.68
CMTM1-214ENST00000530141 ITSN1Q15811 1721 aa10.79□□□□□ -0.68
CMTM1-214ENST00000530141 PTGER2P43116 358 aa10.79□□□□□ -0.68
CMTM1-214ENST00000530141 FHDC1Q9C0D6 1143 aaPredicted RBP10.79□□□□□ -0.68
CMTM1-214ENST00000530141 ANKRD26Q9UPS8 1709 aa10.78□□□□□ -0.68
CMTM1-214ENST00000530141 PLEKHG3A1L390 1219 aa10.78□□□□□ -0.68
CMTM1-214ENST00000530141 FYB1O15117 783 aa10.78□□□□□ -0.68
CMTM1-214ENST00000530141 PYGBP11216 843 aa10.78□□□□□ -0.68
CMTM1-214ENST00000530141 LHX8Q68G74 356 aa10.78□□□□□ -0.68
CMTM1-214ENST00000530141 NGDNQ8NEJ9 315 aaKnown RBP10.78□□□□□ -0.68
CMTM1-214ENST00000530141 PCDHB13Q9Y5F0 798 aa10.78□□□□□ -0.68
CMTM1-214ENST00000530141 AKAP12Q02952 1782 aa10.77□□□□□ -0.68
CMTM1-214ENST00000530141 TOPAZ1Q8N9V7 1692 aa10.77□□□□□ -0.69
CMTM1-214ENST00000530141 ZBTB7CA1YPR0 619 aa10.77□□□□□ -0.69
CMTM1-214ENST00000530141 MTHFSP49914 203 aa10.77□□□□□ -0.69
CMTM1-214ENST00000530141 SHANK3Q9BYB0 1731 aa10.77□□□□□ -0.69
CMTM1-214ENST00000530141 EVA1CP58658 441 aa10.76□□□□□ -0.69
CMTM1-214ENST00000530141 GGNBP2Q9H3C7 697 aa10.76□□□□□ -0.69
CMTM1-214ENST00000530141 CIZ1Q9ULV3 898 aaPredicted RBP10.76□□□□□ -0.69
CMTM1-214ENST00000530141 AATKQ6ZMQ8 1374 aa10.76□□□□□ -0.69
CMTM1-214ENST00000530141 COL5A2P05997 1499 aaPredicted RBP10.75□□□□□ -0.69
CMTM1-214ENST00000530141 KIF20BQ96Q89 1820 aa10.75□□□□□ -0.69
CMTM1-214ENST00000530141 TNNT2P45379 298 aaPredicted RBP10.75□□□□□ -0.69
CMTM1-214ENST00000530141 BARGINQ6ZT62 677 aa10.75□□□□□ -0.69
CMTM1-214ENST00000530141 TCP11L2Q8N4U5 519 aa10.75□□□□□ -0.69
CMTM1-214ENST00000530141 RUNDC1Q96C34 613 aa10.75□□□□□ -0.69
CMTM1-214ENST00000530141 COG3Q96JB2 828 aa10.75□□□□□ -0.69
CMTM1-214ENST00000530141 SYT17Q9BSW7 474 aa10.75□□□□□ -0.69
CMTM1-214ENST00000530141 BCL11BQ9C0K0 894 aaPredicted RBP10.75□□□□□ -0.69
CMTM1-214ENST00000530141 OVOS2A0A0G2JMS6 1433 aa10.75□□□□□ -0.69
CMTM1-214ENST00000530141 OVOS2A0A0J9YW53 1432 aa10.75□□□□□ -0.69
CMTM1-214ENST00000530141 OVOS2Q6IE36 1432 aa10.75□□□□□ -0.69
CMTM1-214ENST00000530141 CHRM1P11229 460 aaPredicted RBP10.74□□□□□ -0.69
CMTM1-214ENST00000530141 GOLGA2Q08379 1002 aa10.74□□□□□ -0.69
CMTM1-214ENST00000530141 TTC21AQ8NDW8 1320 aa10.74□□□□□ -0.69
CMTM1-214ENST00000530141 RGPD5Q99666 1765 aa10.74□□□□□ -0.69
CMTM1-214ENST00000530141 ASTLQ6HA08 431 aaPredicted RBP10.73□□□□□ -0.69
CMTM1-214ENST00000530141 IFNL1Q8IU54 200 aa10.73□□□□□ -0.69
CMTM1-214ENST00000530141 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.73□□□□□ -0.69
CMTM1-214ENST00000530141 TRPC6Q9Y210 931 aa10.73□□□□□ -0.69
CMTM1-214ENST00000530141 RNF123Q5XPI4 1314 aa10.73□□□□□ -0.69
CMTM1-214ENST00000530141 MON2Q7Z3U7 1717 aa10.72□□□□□ -0.69
CMTM1-214ENST00000530141 E9PSI1 815 aa10.72□□□□□ -0.69
CMTM1-214ENST00000530141 DIAPH1O60610 1272 aaKnown RBP10.72□□□□□ -0.69
CMTM1-214ENST00000530141 NEFMP07197 916 aa10.72□□□□□ -0.69
CMTM1-214ENST00000530141 ACEP12821 1306 aa10.72□□□□□ -0.69
CMTM1-214ENST00000530141 APAF1O14727 1248 aa10.71□□□□□ -0.69
CMTM1-214ENST00000530141 ATMINO43313 823 aaPredicted RBP10.71□□□□□ -0.69
CMTM1-214ENST00000530141 GIGYF1O75420 1035 aaPredicted RBP10.71□□□□□ -0.69
CMTM1-214ENST00000530141 U2AF1L5P0DN76 240 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms