RNA–Protein interactions for RNA: ENST00000529759.1

LDLRAD3-204, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-204ENST00000529759 EDC4Q6P2E9 1401 aaKnown RBP15.12■□□□□ 0.01
LDLRAD3-204ENST00000529759 SYTL4Q96C24 671 aaPredicted RBP15.12■□□□□ 0.01
LDLRAD3-204ENST00000529759 LY75O60449 1722 aa15.12■□□□□ 0.01
LDLRAD3-204ENST00000529759 SMIM5Q71RC9 77 aa15.11■□□□□ 0.01
LDLRAD3-204ENST00000529759 COL23A1Q86Y22 540 aaPredicted RBP15.11■□□□□ 0.01
LDLRAD3-204ENST00000529759 TFCP2L1Q9NZI6 479 aa15.11■□□□□ 0.01
LDLRAD3-204ENST00000529759 MAP3K19Q56UN5 1328 aa15.11■□□□□ 0.01
LDLRAD3-204ENST00000529759 MSL1Q68DK7 614 aa15.1■□□□□ 0.01
LDLRAD3-204ENST00000529759 MEGF6O75095 1541 aa15.1■□□□□ 0.01
LDLRAD3-204ENST00000529759 HOXC9P31274 260 aa15.09■□□□□ 0.01
LDLRAD3-204ENST00000529759 SLC27A3Q5K4L6 730 aa15.09■□□□□ 0.01
LDLRAD3-204ENST00000529759 HDGFL2Q7Z4V5 671 aaPredicted RBP15.09■□□□□ 0.01
LDLRAD3-204ENST00000529759 USHBP1Q8N6Y0 703 aa15.09■□□□□ 0.01
LDLRAD3-204ENST00000529759 SLC16A10Q8TF71 515 aa15.09■□□□□ 0.01
LDLRAD3-204ENST00000529759 AMIGO3Q86WK7 504 aa15.08■□□□□ 0
LDLRAD3-204ENST00000529759 ANKRD36BQ8N2N9 1353 aa15.08■□□□□ 0
LDLRAD3-204ENST00000529759 NBPF6Q5VWK0 638 aa15.07■□□□□ 0
LDLRAD3-204ENST00000529759 ZCRB1Q8TBF4 217 aaKnown RBP15.07■□□□□ 0
LDLRAD3-204ENST00000529759 NBPF4Q96M43 638 aa15.07■□□□□ 0
LDLRAD3-204ENST00000529759 PUS7Q96PZ0 661 aaKnown RBP15.07■□□□□ 0
LDLRAD3-204ENST00000529759 TESK2Q96S53 571 aa15.07■□□□□ 0
LDLRAD3-204ENST00000529759 POLD1P28340 1107 aa15.06■□□□□ 0
LDLRAD3-204ENST00000529759 RRS1Q15050 365 aaKnown RBP15.06■□□□□ 0
LDLRAD3-204ENST00000529759 TERF2IPQ9NYB0 399 aa15.06■□□□□ 0
LDLRAD3-204ENST00000529759 CCNL1Q9UK58 526 aaPredicted RBP15.06■□□□□ 0
LDLRAD3-204ENST00000529759 KIF20BQ96Q89 1820 aa15.04■□□□□ -0
LDLRAD3-204ENST00000529759 MSH5O43196 834 aa15.04■□□□□ -0
LDLRAD3-204ENST00000529759 GIGYF1O75420 1035 aaPredicted RBP15.04■□□□□ -0
LDLRAD3-204ENST00000529759 AMPHP49418 695 aa15.03■□□□□ -0
LDLRAD3-204ENST00000529759 WWC3Q9ULE0 1092 aa15.03■□□□□ -0
LDLRAD3-204ENST00000529759 TAF1LQ8IZX4 1826 aa15.02■□□□□ -0
LDLRAD3-204ENST00000529759 ST20-MTHFSA0A0A6YYL1 179 aa15.02■□□□□ -0
LDLRAD3-204ENST00000529759 FYB1O15117 783 aa15.01□□□□□ -0.01
LDLRAD3-204ENST00000529759 COG3Q96JB2 828 aa15.01□□□□□ -0.01
LDLRAD3-204ENST00000529759 GGNBP2Q9H3C7 697 aa15.01□□□□□ -0.01
LDLRAD3-204ENST00000529759 SLC24A1O60721 1099 aa15□□□□□ -0.01
LDLRAD3-204ENST00000529759 HSP90AB2PQ58FF8 381 aa15□□□□□ -0.01
LDLRAD3-204ENST00000529759 TOGARAM1Q9Y4F4 1720 aa15□□□□□ -0.01
LDLRAD3-204ENST00000529759 C5P01031 1676 aa15□□□□□ -0.01
LDLRAD3-204ENST00000529759 CYP27B1O15528 508 aa14.99□□□□□ -0.01
LDLRAD3-204ENST00000529759 ATP10DQ9P241 1426 aa14.99□□□□□ -0.01
LDLRAD3-204ENST00000529759 ITGB4P16144 1822 aa14.99□□□□□ -0.01
LDLRAD3-204ENST00000529759 USP47Q96K76 1375 aa14.98□□□□□ -0.01
LDLRAD3-204ENST00000529759 TRIM26Q12899 539 aaPredicted RBP14.98□□□□□ -0.01
LDLRAD3-204ENST00000529759 IFFO2Q5TF58 517 aa14.97□□□□□ -0.01
LDLRAD3-204ENST00000529759 MPRIPQ6WCQ1 1025 aa14.97□□□□□ -0.01
LDLRAD3-204ENST00000529759 ZNF526Q8TF50 670 aaPredicted RBP14.97□□□□□ -0.01
LDLRAD3-204ENST00000529759 GRIN3BO60391 1043 aa14.96□□□□□ -0.01
LDLRAD3-204ENST00000529759 RTL1A6NKG5 1358 aa14.96□□□□□ -0.02
LDLRAD3-204ENST00000529759 UBR3Q6ZT12 1888 aa14.95□□□□□ -0.02
LDLRAD3-204ENST00000529759 PALLDQ8WX93 1383 aa14.95□□□□□ -0.02
LDLRAD3-204ENST00000529759 MAP2P11137 1827 aaKnown RBP14.94□□□□□ -0.02
LDLRAD3-204ENST00000529759 PIGBQ92521 554 aa14.94□□□□□ -0.02
LDLRAD3-204ENST00000529759 ADCY9O60503 1353 aa14.94□□□□□ -0.02
LDLRAD3-204ENST00000529759 C4BP0C0L5 1744 aa14.94□□□□□ -0.02
LDLRAD3-204ENST00000529759 ANKRD26Q9UPS8 1709 aa14.94□□□□□ -0.02
LDLRAD3-204ENST00000529759 PHF14O94880 888 aa14.93□□□□□ -0.02
LDLRAD3-204ENST00000529759 TATP17735 454 aaPredicted RBP14.93□□□□□ -0.02
LDLRAD3-204ENST00000529759 TMF1P82094 1093 aa14.93□□□□□ -0.02
LDLRAD3-204ENST00000529759 RAPGEF4Q8WZA2 1011 aa14.93□□□□□ -0.02
LDLRAD3-204ENST00000529759 CARD14Q9BXL6 1004 aa14.93□□□□□ -0.02
LDLRAD3-204ENST00000529759 CD2APQ9Y5K6 639 aa14.93□□□□□ -0.02
LDLRAD3-204ENST00000529759 EMILIN1Q9Y6C2 1016 aa14.93□□□□□ -0.02
LDLRAD3-204ENST00000529759 LINC00116Q8NCU8 138 aa14.92□□□□□ -0.02
LDLRAD3-204ENST00000529759 INSRP06213 1382 aa14.91□□□□□ -0.02
LDLRAD3-204ENST00000529759 IGSF1Q8N6C5 1336 aa14.91□□□□□ -0.02
LDLRAD3-204ENST00000529759 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.9□□□□□ -0.02
LDLRAD3-204ENST00000529759 ITPK1Q13572 414 aa14.9□□□□□ -0.02
LDLRAD3-204ENST00000529759 GPBP1L1Q9HC44 474 aaPredicted RBP14.9□□□□□ -0.02
LDLRAD3-204ENST00000529759 ASAP1Q9ULH1 1129 aa14.9□□□□□ -0.02
LDLRAD3-204ENST00000529759 SMG6Q86US8 1419 aaKnown RBP14.9□□□□□ -0.02
LDLRAD3-204ENST00000529759 CGNL1Q0VF96 1302 aa14.9□□□□□ -0.02
LDLRAD3-204ENST00000529759 PCDH11XQ9BZA7 1347 aa14.9□□□□□ -0.02
LDLRAD3-204ENST00000529759 PCDH11YQ9BZA8 1340 aa14.9□□□□□ -0.02
LDLRAD3-204ENST00000529759 PKD1L3Q7Z443 1732 aa14.89□□□□□ -0.03
LDLRAD3-204ENST00000529759 KIF3CO14782 793 aa14.88□□□□□ -0.03
LDLRAD3-204ENST00000529759 CDCA8Q53HL2 280 aa14.88□□□□□ -0.03
LDLRAD3-204ENST00000529759 KIF24Q5T7B8 1368 aa14.87□□□□□ -0.03
LDLRAD3-204ENST00000529759 HSPA6P17066 643 aa14.87□□□□□ -0.03
LDLRAD3-204ENST00000529759 AK7Q96M32 723 aa14.87□□□□□ -0.03
LDLRAD3-204ENST00000529759 SLC4A9Q96Q91 983 aa14.87□□□□□ -0.03
LDLRAD3-204ENST00000529759 FLT4P35916 1363 aa14.86□□□□□ -0.03
LDLRAD3-204ENST00000529759 KIAA1551Q9HCM1 1747 aa14.86□□□□□ -0.03
LDLRAD3-204ENST00000529759 N4BP2Q86UW6 1770 aaPredicted RBP14.86□□□□□ -0.03
LDLRAD3-204ENST00000529759 LOC102724428A0A0B4J2F2 783 aa14.86□□□□□ -0.03
LDLRAD3-204ENST00000529759 SIK1P57059 783 aa14.86□□□□□ -0.03
LDLRAD3-204ENST00000529759 NKX1-1Q15270 411 aaPredicted RBP14.86□□□□□ -0.03
LDLRAD3-204ENST00000529759 NCAPD2Q15021 1401 aa14.85□□□□□ -0.03
LDLRAD3-204ENST00000529759 FLAD1Q8NFF5 587 aa14.85□□□□□ -0.03
LDLRAD3-204ENST00000529759 EYA1Q99502 592 aa14.85□□□□□ -0.03
LDLRAD3-204ENST00000529759 TIMELESSQ9UNS1 1208 aa14.85□□□□□ -0.03
LDLRAD3-204ENST00000529759 CLSPNQ9HAW4 1339 aa14.85□□□□□ -0.03
LDLRAD3-204ENST00000529759 NSD3Q9BZ95 1437 aa14.84□□□□□ -0.03
LDLRAD3-204ENST00000529759 PPM1GO15355 546 aaPredicted RBP14.84□□□□□ -0.03
LDLRAD3-204ENST00000529759 SMARCC1Q92922 1105 aaPredicted RBP14.84□□□□□ -0.03
LDLRAD3-204ENST00000529759 ATG3Q9NT62 314 aa14.84□□□□□ -0.03
LDLRAD3-204ENST00000529759 A0A0G2JLW4 131 aa14.83□□□□□ -0.04
LDLRAD3-204ENST00000529759 GNPATO15228 680 aa14.83□□□□□ -0.04
LDLRAD3-204ENST00000529759 MMP10P09238 476 aa14.82□□□□□ -0.04
LDLRAD3-204ENST00000529759 SSFA2P28290 1259 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms