RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 FMNL2Q96PY5 1086 aa11.93□□□□□ -0.5
CCDC90B-214ENST00000529689 PLA2R1Q13018 1463 aa11.92□□□□□ -0.5
CCDC90B-214ENST00000529689 CCDC83Q8IWF9 413 aa11.92□□□□□ -0.5
CCDC90B-214ENST00000529689 SHANK2Q9UPX8 1470 aa11.92□□□□□ -0.5
CCDC90B-214ENST00000529689 EIF4G3O43432 1585 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-214ENST00000529689 HTATSF1O43719 755 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-214ENST00000529689 ZSCAN30Q86W11 494 aa11.92□□□□□ -0.5
CCDC90B-214ENST00000529689 TRMT2AQ8IZ69 625 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-214ENST00000529689 NPHP1O15259 732 aa11.92□□□□□ -0.5
CCDC90B-214ENST00000529689 FLIIQ13045 1269 aa11.92□□□□□ -0.5
CCDC90B-214ENST00000529689 JARID2Q92833 1246 aaPredicted RBP11.92□□□□□ -0.5
CCDC90B-214ENST00000529689 TCEANC2Q96MN5 208 aa11.91□□□□□ -0.5
CCDC90B-214ENST00000529689 CASTP20810 708 aaKnown RBP11.91□□□□□ -0.5
CCDC90B-214ENST00000529689 AACSQ86V21 672 aa11.91□□□□□ -0.5
CCDC90B-214ENST00000529689 STK11IPQ8N1F8 1099 aa11.91□□□□□ -0.5
CCDC90B-214ENST00000529689 DDX58O95786 925 aaKnown RBP11.91□□□□□ -0.5
CCDC90B-214ENST00000529689 APPP05067 770 aa11.91□□□□□ -0.5
CCDC90B-214ENST00000529689 CAMK4Q16566 473 aa11.91□□□□□ -0.5
CCDC90B-214ENST00000529689 MPRIPQ6WCQ1 1025 aa11.91□□□□□ -0.5
CCDC90B-214ENST00000529689 G2E3Q7L622 706 aa11.91□□□□□ -0.5
CCDC90B-214ENST00000529689 PLEKHM2Q8IWE5 1019 aa11.91□□□□□ -0.5
CCDC90B-214ENST00000529689 CCDC39Q9UFE4 941 aa11.91□□□□□ -0.5
CCDC90B-214ENST00000529689 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.91□□□□□ -0.5
CCDC90B-214ENST00000529689 HSP90AB4PQ58FF6 505 aa11.9□□□□□ -0.5
CCDC90B-214ENST00000529689 RNF20Q5VTR2 975 aa11.9□□□□□ -0.5
CCDC90B-214ENST00000529689 PRPF40BQ6NWY9 871 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-214ENST00000529689 RAPGEF4Q8WZA2 1011 aa11.9□□□□□ -0.5
CCDC90B-214ENST00000529689 ZNF830Q96NB3 372 aaPredicted RBP11.9□□□□□ -0.5
CCDC90B-214ENST00000529689 TRIM5Q9C035 493 aa11.9□□□□□ -0.5
CCDC90B-214ENST00000529689 MCM2P49736 904 aa11.9□□□□□ -0.5
CCDC90B-214ENST00000529689 ZC3H6P61129 1189 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-214ENST00000529689 LARP1BQ659C4 914 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-214ENST00000529689 DDX11Q96FC9 970 aa11.9□□□□□ -0.5
CCDC90B-214ENST00000529689 CCDC85AQ96PX6 553 aaPredicted RBP11.9□□□□□ -0.5
CCDC90B-214ENST00000529689 CCDC8Q9H0W5 538 aaPredicted RBP11.9□□□□□ -0.5
CCDC90B-214ENST00000529689 USP25Q9UHP3 1055 aa11.9□□□□□ -0.5
CCDC90B-214ENST00000529689 ACEP12821 1306 aa11.9□□□□□ -0.5
CCDC90B-214ENST00000529689 TARBP1Q13395 1621 aaKnown RBP11.9□□□□□ -0.51
CCDC90B-214ENST00000529689 GNAT3A8MTJ3 354 aa11.89□□□□□ -0.51
CCDC90B-214ENST00000529689 EIF4A2Q14240 407 aaKnown RBP11.89□□□□□ -0.51
CCDC90B-214ENST00000529689 SASS6Q6UVJ0 657 aa11.89□□□□□ -0.51
CCDC90B-214ENST00000529689 TMX3Q96JJ7 454 aa11.89□□□□□ -0.51
CCDC90B-214ENST00000529689 BOLA2Q9H3K6 86 aa11.89□□□□□ -0.51
CCDC90B-214ENST00000529689 IL16Q14005 1332 aa11.89□□□□□ -0.51
CCDC90B-214ENST00000529689 WDR33Q9C0J8 1336 aaKnown RBP11.89□□□□□ -0.51
CCDC90B-214ENST00000529689 UQCRHLA0A096LP55 91 aa11.89□□□□□ -0.51
CCDC90B-214ENST00000529689 UQCRHP07919 91 aa11.89□□□□□ -0.51
CCDC90B-214ENST00000529689 CYP46A1Q9Y6A2 500 aa11.89□□□□□ -0.51
CCDC90B-214ENST00000529689 PTPRTO14522 1441 aa11.89□□□□□ -0.51
CCDC90B-214ENST00000529689 PRIM1P49642 420 aaKnown RBP11.89□□□□□ -0.51
CCDC90B-214ENST00000529689 PDE1AP54750 535 aa11.89□□□□□ -0.51
CCDC90B-214ENST00000529689 ANKRD44Q8N8A2 993 aa11.89□□□□□ -0.51
CCDC90B-214ENST00000529689 PBRM1Q86U86 1689 aa11.89□□□□□ -0.51
CCDC90B-214ENST00000529689 WDR7Q9Y4E6 1490 aa11.88□□□□□ -0.51
CCDC90B-214ENST00000529689 ZSCAN23Q3MJ62 389 aa11.88□□□□□ -0.51
CCDC90B-214ENST00000529689 WASHC4Q2M389 1173 aa11.88□□□□□ -0.51
CCDC90B-214ENST00000529689 TFIP11Q9UBB9 837 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-214ENST00000529689 ISY1Q9ULR0 285 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-214ENST00000529689 BTBD11A6QL63 1104 aa11.88□□□□□ -0.51
CCDC90B-214ENST00000529689 PPP1R42Q7Z4L9 355 aa11.88□□□□□ -0.51
CCDC90B-214ENST00000529689 CEP170Q5SW79 1584 aa11.88□□□□□ -0.51
CCDC90B-214ENST00000529689 PI4KAP2A4QPH2 592 aa11.87□□□□□ -0.51
CCDC90B-214ENST00000529689 CD2BP2O95400 341 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-214ENST00000529689 KLHL40Q2TBA0 621 aa11.87□□□□□ -0.51
CCDC90B-214ENST00000529689 PI4KAP1Q8N8J0 262 aa11.87□□□□□ -0.51
CCDC90B-214ENST00000529689 CPLX1O14810 134 aa11.87□□□□□ -0.51
CCDC90B-214ENST00000529689 CCAR2Q8N163 923 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-214ENST00000529689 SYTL4Q96C24 671 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-214ENST00000529689 SDF4Q9BRK5 362 aa11.87□□□□□ -0.51
CCDC90B-214ENST00000529689 AMOTL2Q9Y2J4 779 aa11.87□□□□□ -0.51
CCDC90B-214ENST00000529689 CPA1P15085 419 aa11.87□□□□□ -0.51
CCDC90B-214ENST00000529689 PKP1Q13835 747 aa11.87□□□□□ -0.51
CCDC90B-214ENST00000529689 RAB3GAP1Q15042 981 aa11.87□□□□□ -0.51
CCDC90B-214ENST00000529689 CEP85Q6P2H3 762 aa11.87□□□□□ -0.51
CCDC90B-214ENST00000529689 DCTPP1Q9H773 170 aa11.87□□□□□ -0.51
CCDC90B-214ENST00000529689 PDRG1Q9NUG6 133 aa11.87□□□□□ -0.51
CCDC90B-214ENST00000529689 UGGT1Q9NYU2 1555 aa11.87□□□□□ -0.51
CCDC90B-214ENST00000529689 USP19O94966 1318 aa11.86□□□□□ -0.51
CCDC90B-214ENST00000529689 FAM177BA6PVY3 158 aa11.86□□□□□ -0.51
CCDC90B-214ENST00000529689 ASXL2Q76L83 1435 aa11.86□□□□□ -0.51
CCDC90B-214ENST00000529689 NSD2O96028 1365 aa11.86□□□□□ -0.51
CCDC90B-214ENST00000529689 ATP2B1P20020 1258 aa11.86□□□□□ -0.51
CCDC90B-214ENST00000529689 MTHFSDQ2M296 383 aaKnown RBP11.86□□□□□ -0.51
CCDC90B-214ENST00000529689 CKAP2LQ8IYA6 745 aa11.86□□□□□ -0.51
CCDC90B-214ENST00000529689 NECAB1Q8N987 351 aa11.86□□□□□ -0.51
CCDC90B-214ENST00000529689 ARHGAP45Q92619 1136 aa11.86□□□□□ -0.51
CCDC90B-214ENST00000529689 NPC1L1Q9UHC9 1359 aa11.86□□□□□ -0.51
CCDC90B-214ENST00000529689 HCLS1P14317 486 aaPredicted RBP11.85□□□□□ -0.51
CCDC90B-214ENST00000529689 CLCN1P35523 988 aa11.85□□□□□ -0.51
CCDC90B-214ENST00000529689 GAS2L3Q86XJ1 694 aa11.85□□□□□ -0.51
CCDC90B-214ENST00000529689 SNX21Q969T3 373 aa11.85□□□□□ -0.51
CCDC90B-214ENST00000529689 PIP4K2AP48426 406 aaPredicted RBP11.85□□□□□ -0.51
CCDC90B-214ENST00000529689 BLOC1S2Q6QNY1 142 aa11.85□□□□□ -0.51
CCDC90B-214ENST00000529689 KIF3AQ9Y496 699 aa11.85□□□□□ -0.51
CCDC90B-214ENST00000529689 PLEKHO1Q53GL0 409 aaPredicted RBP11.84□□□□□ -0.51
CCDC90B-214ENST00000529689 KIF1BPQ96EK5 621 aa11.84□□□□□ -0.51
CCDC90B-214ENST00000529689 PRDM10Q9NQV6 1147 aa11.84□□□□□ -0.51
CCDC90B-214ENST00000529689 TPM2P07951 284 aa11.84□□□□□ -0.51
CCDC90B-214ENST00000529689 GIMAP6Q6P9H5 292 aa11.84□□□□□ -0.51
CCDC90B-214ENST00000529689 CCDC73Q6ZRK6 1079 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms