RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 RAI14Q9P0K7 980 aa9.61□□□□□ -0.87
CTNND1-220ENST00000529526 SYCP1Q15431 976 aa9.61□□□□□ -0.87
CTNND1-220ENST00000529526 ANKRD30BQ9BXX2 1392 aa9.61□□□□□ -0.87
CTNND1-220ENST00000529526 PRDM11Q9NQV5 511 aa9.61□□□□□ -0.87
CTNND1-220ENST00000529526 IFT140Q96RY7 1462 aa9.61□□□□□ -0.87
CTNND1-220ENST00000529526 ATAD2Q6PL18 1390 aa9.61□□□□□ -0.87
CTNND1-220ENST00000529526 CCP110O43303 1012 aa9.61□□□□□ -0.87
CTNND1-220ENST00000529526 PIP4K2BP78356 416 aa9.61□□□□□ -0.87
CTNND1-220ENST00000529526 PPFIBP1Q86W92 1011 aa9.61□□□□□ -0.87
CTNND1-220ENST00000529526 TOP2BQ02880 1626 aa9.61□□□□□ -0.87
CTNND1-220ENST00000529526 C20orf194Q5TEA3 1177 aa9.6□□□□□ -0.87
CTNND1-220ENST00000529526 ZSCAN25Q6NSZ9 544 aa9.6□□□□□ -0.87
CTNND1-220ENST00000529526 ERCC4Q92889 916 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-220ENST00000529526 TOPBP1Q92547 1522 aa9.6□□□□□ -0.87
CTNND1-220ENST00000529526 IDH1O75874 414 aaKnown RBP9.6□□□□□ -0.87
CTNND1-220ENST00000529526 SOGA3Q5TF21 947 aa9.6□□□□□ -0.87
CTNND1-220ENST00000529526 DUSP27Q5VZP5 1158 aa9.6□□□□□ -0.87
CTNND1-220ENST00000529526 CAMK4Q16566 473 aa9.6□□□□□ -0.87
CTNND1-220ENST00000529526 ANKLE2Q86XL3 938 aa9.6□□□□□ -0.87
CTNND1-220ENST00000529526 DEF6Q9H4E7 631 aa9.6□□□□□ -0.87
CTNND1-220ENST00000529526 ZNHIT6Q9NWK9 470 aaKnown RBP9.6□□□□□ -0.87
CTNND1-220ENST00000529526 NOM1Q5C9Z4 860 aaKnown RBP9.59□□□□□ -0.87
CTNND1-220ENST00000529526 CEP126Q9P2H0 1117 aa9.59□□□□□ -0.87
CTNND1-220ENST00000529526 POLA1P09884 1462 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-220ENST00000529526 KRI1Q8N9T8 703 aaKnown RBP9.59□□□□□ -0.87
CTNND1-220ENST00000529526 UBAC1Q9BSL1 405 aa9.59□□□□□ -0.87
CTNND1-220ENST00000529526 LRP2BPQ9P2M1 347 aa9.59□□□□□ -0.87
CTNND1-220ENST00000529526 ARHGEF11O15085 1522 aa9.59□□□□□ -0.87
CTNND1-220ENST00000529526 SSBP05455 408 aaKnown RBP eCLIP9.59□□□□□ -0.871e-7■■■■■ 26.8
CTNND1-220ENST00000529526 PIP4K2AP48426 406 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-220ENST00000529526 PRXQ9BXM0 1461 aa9.59□□□□□ -0.87
CTNND1-220ENST00000529526 AXDND1Q5T1B0 1012 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-220ENST00000529526 DACH1Q9UI36 760 aa9.59□□□□□ -0.87
CTNND1-220ENST00000529526 ZSCAN29Q8IWY8 852 aaPredicted RBP9.59□□□□□ -0.88
CTNND1-220ENST00000529526 RPGRIP1LQ68CZ1 1315 aa9.58□□□□□ -0.88
CTNND1-220ENST00000529526 MYO6Q9UM54 1294 aa9.58□□□□□ -0.88
CTNND1-220ENST00000529526 NOL7Q9UMY1 257 aaKnown RBP9.58□□□□□ -0.88
CTNND1-220ENST00000529526 CCDC83Q8IWF9 413 aa9.58□□□□□ -0.88
CTNND1-220ENST00000529526 NUP62CLQ9H1M0 184 aa9.58□□□□□ -0.88
CTNND1-220ENST00000529526 STIM1Q13586 685 aa9.58□□□□□ -0.88
CTNND1-220ENST00000529526 PRPF40BQ6NWY9 871 aaKnown RBP9.58□□□□□ -0.88
CTNND1-220ENST00000529526 RPAP2Q8IXW5 612 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-220ENST00000529526 MYD88Q99836 296 aa9.58□□□□□ -0.88
CTNND1-220ENST00000529526 H0YHG0 523 aa9.58□□□□□ -0.88
CTNND1-220ENST00000529526 PTCD1O75127 700 aaKnown RBP9.58□□□□□ -0.88
CTNND1-220ENST00000529526 NME9Q86XW9 330 aa9.58□□□□□ -0.88
CTNND1-220ENST00000529526 C11orf95C9JLR9 678 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-220ENST00000529526 F6X3S4 739 aa9.57□□□□□ -0.88
CTNND1-220ENST00000529526 ZSCAN31Q96LW9 406 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-220ENST00000529526 SYCE3A1L190 88 aa9.57□□□□□ -0.88
CTNND1-220ENST00000529526 CDKL5O76039 1030 aa9.57□□□□□ -0.88
CTNND1-220ENST00000529526 FERMT3Q86UX7 667 aa9.57□□□□□ -0.88
CTNND1-220ENST00000529526 MAP7D2Q96T17 732 aa9.57□□□□□ -0.88
CTNND1-220ENST00000529526 PDCL3Q9H2J4 239 aa9.57□□□□□ -0.88
CTNND1-220ENST00000529526 SEPT11Q9NVA2 429 aaKnown RBP9.57□□□□□ -0.88
CTNND1-220ENST00000529526 MX1P20591 662 aa9.57□□□□□ -0.88
CTNND1-220ENST00000529526 MCM4P33991 863 aa9.57□□□□□ -0.88
CTNND1-220ENST00000529526 USP5P45974 858 aa9.57□□□□□ -0.88
CTNND1-220ENST00000529526 METTL24Q5JXM2 366 aa9.57□□□□□ -0.88
CTNND1-220ENST00000529526 WWC2Q6AWC2 1192 aa9.57□□□□□ -0.88
CTNND1-220ENST00000529526 AIDAQ96BJ3 306 aa9.57□□□□□ -0.88
CTNND1-220ENST00000529526 BOLA2Q9H3K6 86 aa9.57□□□□□ -0.88
CTNND1-220ENST00000529526 ABCF2Q9UG63 623 aa9.57□□□□□ -0.88
CTNND1-220ENST00000529526 PCF11O94913 1555 aaKnown RBP9.57□□□□□ -0.88
CTNND1-220ENST00000529526 CCDC181Q5TID7 509 aa9.57□□□□□ -0.88
CTNND1-220ENST00000529526 CTNNA3Q9UI47 895 aa9.57□□□□□ -0.88
CTNND1-220ENST00000529526 EPRSP07814 1512 aaKnown RBP9.57□□□□□ -0.88
CTNND1-220ENST00000529526 IGHMBP2P38935 993 aaKnown RBP9.57□□□□□ -0.88
CTNND1-220ENST00000529526 IMMTQ16891 758 aaKnown RBP9.57□□□□□ -0.88
CTNND1-220ENST00000529526 SSH1Q8WYL5 1049 aa9.57□□□□□ -0.88
CTNND1-220ENST00000529526 CFAP45Q9UL16 551 aa9.56□□□□□ -0.88
CTNND1-220ENST00000529526 PPP6R1Q9UPN7 881 aa9.56□□□□□ -0.88
CTNND1-220ENST00000529526 CC2D2AQ9P2K1 1620 aa9.56□□□□□ -0.88
CTNND1-220ENST00000529526 NAIPQ13075 1403 aa9.56□□□□□ -0.88
CTNND1-220ENST00000529526 UPF3BQ9BZI7 483 aaKnown RBP9.56□□□□□ -0.88
CTNND1-220ENST00000529526 UQCRHLA0A096LP55 91 aa9.56□□□□□ -0.88
CTNND1-220ENST00000529526 MPHOSPH10O00566 681 aaKnown RBP9.56□□□□□ -0.88
CTNND1-220ENST00000529526 UQCRHP07919 91 aa9.56□□□□□ -0.88
CTNND1-220ENST00000529526 RDXP35241 583 aaKnown RBP9.56□□□□□ -0.88
CTNND1-220ENST00000529526 RARSP54136 660 aaKnown RBP9.56□□□□□ -0.88
CTNND1-220ENST00000529526 FILIP1Q7Z7B0 1213 aa9.56□□□□□ -0.88
CTNND1-220ENST00000529526 CCDC112Q8NEF3 446 aa9.56□□□□□ -0.88
CTNND1-220ENST00000529526 EMILIN1Q9Y6C2 1016 aa9.56□□□□□ -0.88
CTNND1-220ENST00000529526 CBFA2T2O43439 604 aa9.56□□□□□ -0.88
CTNND1-220ENST00000529526 FAM193AP78312 1265 aa9.56□□□□□ -0.88
CTNND1-220ENST00000529526 LARP6Q9BRS8 491 aaKnown RBP9.56□□□□□ -0.88
CTNND1-220ENST00000529526 CAMSAP2Q08AD1 1489 aa9.56□□□□□ -0.88
CTNND1-220ENST00000529526 CEP57L1Q8IYX8 460 aa9.55□□□□□ -0.88
CTNND1-220ENST00000529526 KRT32Q14532 448 aa9.55□□□□□ -0.88
CTNND1-220ENST00000529526 MTERF4Q7Z6M4 381 aaKnown RBP9.55□□□□□ -0.88
CTNND1-220ENST00000529526 CWC15Q9P013 229 aaKnown RBP9.55□□□□□ -0.88
CTNND1-220ENST00000529526 CCDC61Q9Y6R9 512 aa9.55□□□□□ -0.88
CTNND1-220ENST00000529526 KIF1BPQ96EK5 621 aa9.55□□□□□ -0.88
CTNND1-220ENST00000529526 ZNF76P36508 570 aa9.55□□□□□ -0.88
CTNND1-220ENST00000529526 HMGN5P82970 282 aaKnown RBP9.55□□□□□ -0.88
CTNND1-220ENST00000529526 MPRIPQ6WCQ1 1025 aa9.55□□□□□ -0.88
CTNND1-220ENST00000529526 CCDC8Q9H0W5 538 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-220ENST00000529526 GUCY1B3Q02153 619 aa9.55□□□□□ -0.88
CTNND1-220ENST00000529526 PAF1Q8N7H5 531 aa9.55□□□□□ -0.88
CTNND1-220ENST00000529526 PTPN23Q9H3S7 1636 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms