RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 LRRC4BQ9NT99 713 aa8.81□□□□□ -1
CHRNA6-202ENST00000529467 CLSPNQ9HAW4 1339 aa8.8□□□□□ -1
CHRNA6-202ENST00000529467 BTAF1O14981 1849 aa8.8□□□□□ -1
CHRNA6-202ENST00000529467 ZNF827Q17R98 1081 aa8.8□□□□□ -1
CHRNA6-202ENST00000529467 REM2Q8IYK8 340 aaPredicted RBP8.8□□□□□ -1
CHRNA6-202ENST00000529467 TMC1Q8TDI8 760 aa8.8□□□□□ -1
CHRNA6-202ENST00000529467 ARXQ96QS3 562 aa8.8□□□□□ -1
CHRNA6-202ENST00000529467 PAPPAQ13219 1627 aa8.8□□□□□ -1
CHRNA6-202ENST00000529467 HDGFL2Q7Z4V5 671 aaPredicted RBP8.79□□□□□ -1
CHRNA6-202ENST00000529467 IP6K1Q92551 441 aa8.79□□□□□ -1
CHRNA6-202ENST00000529467 PUS7Q96PZ0 661 aaKnown RBP8.79□□□□□ -1
CHRNA6-202ENST00000529467 CARD11Q9BXL7 1154 aa8.79□□□□□ -1
CHRNA6-202ENST00000529467 MAP3K5Q99683 1374 aa8.78□□□□□ -1
CHRNA6-202ENST00000529467 SLC16A10Q8TF71 515 aa8.78□□□□□ -1
CHRNA6-202ENST00000529467 TERF2IPQ9NYB0 399 aa8.78□□□□□ -1
CHRNA6-202ENST00000529467 EDC4Q6P2E9 1401 aaKnown RBP8.78□□□□□ -1
CHRNA6-202ENST00000529467 SLC27A3Q5K4L6 730 aa8.77□□□□□ -1.01
CHRNA6-202ENST00000529467 DDX54Q8TDD1 881 aaKnown RBP8.77□□□□□ -1.01
CHRNA6-202ENST00000529467 COL24A1Q17RW2 1714 aa8.77□□□□□ -1.01
CHRNA6-202ENST00000529467 A0A1W2PP64 1363 aa8.76□□□□□ -1.01
CHRNA6-202ENST00000529467 FBLN1P23142 703 aa8.76□□□□□ -1.01
CHRNA6-202ENST00000529467 LTV1Q96GA3 475 aaPredicted RBP8.76□□□□□ -1.01
CHRNA6-202ENST00000529467 QSER1Q2KHR3 1735 aa8.76□□□□□ -1.01
CHRNA6-202ENST00000529467 PNPLA7Q6ZV29 1317 aa8.76□□□□□ -1.01
CHRNA6-202ENST00000529467 HOXC9P31274 260 aa8.75□□□□□ -1.01
CHRNA6-202ENST00000529467 PRIM1P49642 420 aaKnown RBP8.75□□□□□ -1.01
CHRNA6-202ENST00000529467 KCNQ4P56696 695 aa8.75□□□□□ -1.01
CHRNA6-202ENST00000529467 TESK2Q96S53 571 aa8.75□□□□□ -1.01
CHRNA6-202ENST00000529467 RGPD2P0DJD1 1756 aa8.75□□□□□ -1.01
CHRNA6-202ENST00000529467 C1QTNF8P60827 252 aa8.74□□□□□ -1.01
CHRNA6-202ENST00000529467 GPR162Q16538 588 aa8.74□□□□□ -1.01
CHRNA6-202ENST00000529467 ZCRB1Q8TBF4 217 aaKnown RBP8.74□□□□□ -1.01
CHRNA6-202ENST00000529467 COG3Q96JB2 828 aa8.74□□□□□ -1.01
CHRNA6-202ENST00000529467 MAP3K19Q56UN5 1328 aa8.74□□□□□ -1.01
CHRNA6-202ENST00000529467 LY75O60449 1722 aa8.74□□□□□ -1.01
CHRNA6-202ENST00000529467 ANKRD36BQ8N2N9 1353 aa8.73□□□□□ -1.01
CHRNA6-202ENST00000529467 TUBGCP6Q96RT7 1819 aa8.73□□□□□ -1.01
CHRNA6-202ENST00000529467 FAM208AQ9UK61 1670 aaKnown RBP8.73□□□□□ -1.01
CHRNA6-202ENST00000529467 ST20-MTHFSA0A0A6YYL1 179 aa8.73□□□□□ -1.01
CHRNA6-202ENST00000529467 POLD1P28340 1107 aa8.73□□□□□ -1.01
CHRNA6-202ENST00000529467 AMPHP49418 695 aa8.73□□□□□ -1.01
CHRNA6-202ENST00000529467 SYTL4Q96C24 671 aaPredicted RBP8.73□□□□□ -1.01
CHRNA6-202ENST00000529467 TFCP2L1Q9NZI6 479 aa8.73□□□□□ -1.01
CHRNA6-202ENST00000529467 SHANK3Q9BYB0 1731 aa8.73□□□□□ -1.01
CHRNA6-202ENST00000529467 NSD2O96028 1365 aa8.73□□□□□ -1.01
CHRNA6-202ENST00000529467 UTRNP46939 3433 aa8.72□□□□□ -1.01
CHRNA6-202ENST00000529467 NBPF6Q5VWK0 638 aa8.72□□□□□ -1.01
CHRNA6-202ENST00000529467 NLGN2Q8NFZ4 835 aa8.72□□□□□ -1.01
CHRNA6-202ENST00000529467 NBPF4Q96M43 638 aa8.72□□□□□ -1.01
CHRNA6-202ENST00000529467 DOT1LQ8TEK3 1739 aa8.71□□□□□ -1.01
CHRNA6-202ENST00000529467 SENP3-EIF4A1A0A087X0R7 540 aa8.71□□□□□ -1.02
CHRNA6-202ENST00000529467 SPDYE2BA6NHP3 402 aa8.71□□□□□ -1.02
CHRNA6-202ENST00000529467 FYB1O15117 783 aa8.71□□□□□ -1.02
CHRNA6-202ENST00000529467 SLC24A1O60721 1099 aa8.71□□□□□ -1.02
CHRNA6-202ENST00000529467 SPDYE6P0CI01 402 aa8.71□□□□□ -1.02
CHRNA6-202ENST00000529467 SPDYE2Q495Y8 402 aa8.71□□□□□ -1.02
CHRNA6-202ENST00000529467 COL23A1Q86Y22 540 aaPredicted RBP8.71□□□□□ -1.02
CHRNA6-202ENST00000529467 KLHL34Q8N239 644 aa8.71□□□□□ -1.02
CHRNA6-202ENST00000529467 CCNL1Q9UK58 526 aaPredicted RBP8.71□□□□□ -1.02
CHRNA6-202ENST00000529467 MEGF6O75095 1541 aa8.7□□□□□ -1.02
CHRNA6-202ENST00000529467 PITPNM1O00562 1244 aa8.7□□□□□ -1.02
CHRNA6-202ENST00000529467 FXR2P51116 673 aaKnown RBP eCLIP8.7□□□□□ -1.02
CHRNA6-202ENST00000529467 RRS1Q15050 365 aaKnown RBP8.7□□□□□ -1.02
CHRNA6-202ENST00000529467 PIP4P2Q8N4L2 257 aa8.7□□□□□ -1.02
CHRNA6-202ENST00000529467 TONSLQ96HA7 1378 aa8.7□□□□□ -1.02
CHRNA6-202ENST00000529467 YBX3P16989 372 aaKnown RBP eCLIP8.69□□□□□ -1.02
CHRNA6-202ENST00000529467 PELP1Q8IZL8 1130 aaKnown RBP8.69□□□□□ -1.02
CHRNA6-202ENST00000529467 USHBP1Q8N6Y0 703 aa8.69□□□□□ -1.02
CHRNA6-202ENST00000529467 GGNBP2Q9H3C7 697 aa8.69□□□□□ -1.02
CHRNA6-202ENST00000529467 CGNL1Q0VF96 1302 aa8.69□□□□□ -1.02
CHRNA6-202ENST00000529467 USP47Q96K76 1375 aa8.69□□□□□ -1.02
CHRNA6-202ENST00000529467 GRIN3BO60391 1043 aa8.68□□□□□ -1.02
CHRNA6-202ENST00000529467 TATP17735 454 aaPredicted RBP8.68□□□□□ -1.02
CHRNA6-202ENST00000529467 HSP90AB2PQ58FF8 381 aa8.68□□□□□ -1.02
CHRNA6-202ENST00000529467 CCER1Q8TC90 406 aaPredicted RBP8.68□□□□□ -1.02
CHRNA6-202ENST00000529467 RAPGEF4Q8WZA2 1011 aa8.68□□□□□ -1.02
CHRNA6-202ENST00000529467 RTL1A6NKG5 1358 aa8.68□□□□□ -1.02
CHRNA6-202ENST00000529467 TAF1LQ8IZX4 1826 aa8.68□□□□□ -1.02
CHRNA6-202ENST00000529467 GIGYF1O75420 1035 aaPredicted RBP8.67□□□□□ -1.02
CHRNA6-202ENST00000529467 ITGB4P16144 1822 aa8.66□□□□□ -1.02
CHRNA6-202ENST00000529467 INSRP06213 1382 aa8.66□□□□□ -1.02
CHRNA6-202ENST00000529467 CYP27B1O15528 508 aa8.66□□□□□ -1.02
CHRNA6-202ENST00000529467 HMGB2P26583 209 aaKnown RBP8.66□□□□□ -1.02
CHRNA6-202ENST00000529467 TMF1P82094 1093 aa8.66□□□□□ -1.02
CHRNA6-202ENST00000529467 MKRN4PQ13434 485 aaPredicted RBP8.66□□□□□ -1.02
CHRNA6-202ENST00000529467 MSL1Q68DK7 614 aa8.66□□□□□ -1.02
CHRNA6-202ENST00000529467 FLAD1Q8NFF5 587 aa8.66□□□□□ -1.02
CHRNA6-202ENST00000529467 CD2APQ9Y5K6 639 aa8.66□□□□□ -1.02
CHRNA6-202ENST00000529467 C5P01031 1676 aa8.65□□□□□ -1.02
CHRNA6-202ENST00000529467 PCDH11XQ9BZA7 1347 aa8.65□□□□□ -1.02
CHRNA6-202ENST00000529467 PCDH11YQ9BZA8 1340 aa8.65□□□□□ -1.02
CHRNA6-202ENST00000529467 MPRIPQ6WCQ1 1025 aa8.65□□□□□ -1.02
CHRNA6-202ENST00000529467 AMIGO3Q86WK7 504 aa8.65□□□□□ -1.02
CHRNA6-202ENST00000529467 TIMELESSQ9UNS1 1208 aa8.65□□□□□ -1.02
CHRNA6-202ENST00000529467 SMG6Q86US8 1419 aaKnown RBP8.64□□□□□ -1.03
CHRNA6-202ENST00000529467 KIF24Q5T7B8 1368 aa8.64□□□□□ -1.03
CHRNA6-202ENST00000529467 PALLDQ8WX93 1383 aa8.64□□□□□ -1.03
CHRNA6-202ENST00000529467 NKX1-1Q15270 411 aaPredicted RBP8.64□□□□□ -1.03
CHRNA6-202ENST00000529467 PIGBQ92521 554 aa8.64□□□□□ -1.03
CHRNA6-202ENST00000529467 SMARCC1Q92922 1105 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms