RNA–Protein interactions for RNA: ENST00000529430.1

CLP1-203, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 5 BASIC

Gene CLP1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-203ENST00000529430 USP54Q70EL1 1684 aa14.94□□□□□ -0.02
CLP1-203ENST00000529430 TMEM57Q8N5G2 664 aa14.93□□□□□ -0.02
CLP1-203ENST00000529430 MRPL50Q8N5N7 158 aaKnown RBP14.93□□□□□ -0.02
CLP1-203ENST00000529430 ARHGEF10O15013 1369 aa14.93□□□□□ -0.02
CLP1-203ENST00000529430 RTL1A6NKG5 1358 aa14.93□□□□□ -0.02
CLP1-203ENST00000529430 GCP02774 474 aa14.93□□□□□ -0.02
CLP1-203ENST00000529430 HSP90AB2PQ58FF8 381 aa14.93□□□□□ -0.02
CLP1-203ENST00000529430 DDX17Q92841 729 aaKnown RBP14.93□□□□□ -0.02
CLP1-203ENST00000529430 MBIPQ9NS73 344 aa14.93□□□□□ -0.02
CLP1-203ENST00000529430 TNS3Q68CZ2 1445 aa14.92□□□□□ -0.02
CLP1-203ENST00000529430 SULT6B1Q6IMI4 303 aa14.92□□□□□ -0.02
CLP1-203ENST00000529430 ZBTB40Q9NUA8 1239 aa14.92□□□□□ -0.02
CLP1-203ENST00000529430 TWISTNBQ3B726 338 aaPredicted RBP14.91□□□□□ -0.02
CLP1-203ENST00000529430 THUMPD2Q9BTF0 503 aaKnown RBP14.91□□□□□ -0.02
CLP1-203ENST00000529430 USP19O94966 1318 aa14.91□□□□□ -0.02
CLP1-203ENST00000529430 SPATA31A3Q5VYP0 1347 aa14.91□□□□□ -0.02
CLP1-203ENST00000529430 ZBTB7CA1YPR0 619 aa14.9□□□□□ -0.02
CLP1-203ENST00000529430 PLEKHG5O94827 1062 aa14.9□□□□□ -0.02
CLP1-203ENST00000529430 HOXC9P31274 260 aa14.9□□□□□ -0.02
CLP1-203ENST00000529430 API5Q9BZZ5 524 aaKnown RBP14.9□□□□□ -0.02
CLP1-203ENST00000529430 TRPM3Q9HCF6 1732 aaPredicted RBP14.9□□□□□ -0.02
CLP1-203ENST00000529430 UPF2Q9HAU5 1272 aaKnown RBP14.9□□□□□ -0.02
CLP1-203ENST00000529430 LTBP4Q8N2S1 1624 aa14.9□□□□□ -0.02
CLP1-203ENST00000529430 PXDNQ92626 1479 aa14.9□□□□□ -0.02
CLP1-203ENST00000529430 SMC5Q8IY18 1101 aa14.89□□□□□ -0.03
CLP1-203ENST00000529430 IP6K1Q92551 441 aa14.89□□□□□ -0.03
CLP1-203ENST00000529430 SOS2Q07890 1332 aaPredicted RBP14.89□□□□□ -0.03
CLP1-203ENST00000529430 SLIT3O75094 1523 aa14.88□□□□□ -0.03
CLP1-203ENST00000529430 NFAT5O94916 1531 aa14.87□□□□□ -0.03
CLP1-203ENST00000529430 TOM1O60784 492 aa14.87□□□□□ -0.03
CLP1-203ENST00000529430 ARHGEF25Q86VW2 580 aa14.87□□□□□ -0.03
CLP1-203ENST00000529430 AEBP1Q8IUX7 1158 aa14.87□□□□□ -0.03
CLP1-203ENST00000529430 TSPYL6Q8N831 410 aa14.87□□□□□ -0.03
CLP1-203ENST00000529430 CHL1O00533 1208 aa14.86□□□□□ -0.03
CLP1-203ENST00000529430 ABCC4O15439 1325 aa14.86□□□□□ -0.03
CLP1-203ENST00000529430 KIAA0232Q92628 1395 aa14.86□□□□□ -0.03
CLP1-203ENST00000529430 ALS2Q96Q42 1657 aa14.86□□□□□ -0.03
CLP1-203ENST00000529430 MARF1Q9Y4F3 1742 aaKnown RBP14.86□□□□□ -0.03
CLP1-203ENST00000529430 FAM83GA6ND36 823 aa14.85□□□□□ -0.03
CLP1-203ENST00000529430 ZBTB7BO15156 539 aaPredicted RBP14.85□□□□□ -0.03
CLP1-203ENST00000529430 NFKBIBQ15653 356 aa14.85□□□□□ -0.03
CLP1-203ENST00000529430 C8orf58Q8NAV2 365 aa14.85□□□□□ -0.03
CLP1-203ENST00000529430 PEAK1Q9H792 1746 aa14.85□□□□□ -0.03
CLP1-203ENST00000529430 GSE1Q14687 1217 aa14.85□□□□□ -0.03
CLP1-203ENST00000529430 GCC1Q96CN9 775 aa14.85□□□□□ -0.03
CLP1-203ENST00000529430 LTV1Q96GA3 475 aaPredicted RBP14.85□□□□□ -0.03
CLP1-203ENST00000529430 HTATSF1O43719 755 aaKnown RBP14.84□□□□□ -0.03
CLP1-203ENST00000529430 ZC3H6P61129 1189 aaKnown RBP14.84□□□□□ -0.03
CLP1-203ENST00000529430 GAS2L2Q8NHY3 880 aa14.84□□□□□ -0.03
CLP1-203ENST00000529430 RTF1Q92541 710 aaKnown RBP14.84□□□□□ -0.03
CLP1-203ENST00000529430 ELL2O00472 640 aaPredicted RBP14.83□□□□□ -0.03
CLP1-203ENST00000529430 NUCB1Q02818 461 aa14.83□□□□□ -0.03
CLP1-203ENST00000529430 DCTN1Q14203 1278 aa14.83□□□□□ -0.03
CLP1-203ENST00000529430 BECN1Q14457 450 aa14.83□□□□□ -0.03
CLP1-203ENST00000529430 LRRC59Q96AG4 307 aaKnown RBP14.83□□□□□ -0.03
CLP1-203ENST00000529430 KDRP35968 1356 aa14.83□□□□□ -0.04
CLP1-203ENST00000529430 EYA1Q99502 592 aa14.83□□□□□ -0.04
CLP1-203ENST00000529430 IGSF1Q8N6C5 1336 aa14.82□□□□□ -0.04
CLP1-203ENST00000529430 CABLES1Q8TDN4 633 aa14.82□□□□□ -0.04
CLP1-203ENST00000529430 RGPD1P0DJD0 1748 aa14.81□□□□□ -0.04
CLP1-203ENST00000529430 LTN1O94822 1766 aa14.81□□□□□ -0.04
CLP1-203ENST00000529430 PTPRCP08575 1304 aa14.81□□□□□ -0.04
CLP1-203ENST00000529430 MED1Q15648 1581 aaPredicted RBP14.8□□□□□ -0.04
CLP1-203ENST00000529430 MCM10Q7L590 875 aa14.8□□□□□ -0.04
CLP1-203ENST00000529430 CRB1P82279 1406 aa14.8□□□□□ -0.04
CLP1-203ENST00000529430 NHSL1Q5SYE7 1610 aa14.8□□□□□ -0.04
CLP1-203ENST00000529430 PHRF1Q9P1Y6 1649 aaKnown RBP14.8□□□□□ -0.04
CLP1-203ENST00000529430 SEC24BO95487 1268 aa14.8□□□□□ -0.04
CLP1-203ENST00000529430 CHD1LQ86WJ1 897 aa14.8□□□□□ -0.04
CLP1-203ENST00000529430 VIRMAQ69YN4 1812 aaKnown RBP14.79□□□□□ -0.04
CLP1-203ENST00000529430 MTHFSDQ2M296 383 aaKnown RBP14.79□□□□□ -0.04
CLP1-203ENST00000529430 INTS3Q68E01 1043 aaKnown RBP14.79□□□□□ -0.04
CLP1-203ENST00000529430 ANKRD24Q8TF21 1146 aa14.79□□□□□ -0.04
CLP1-203ENST00000529430 TBC1D32Q96NH3 1257 aa14.79□□□□□ -0.04
CLP1-203ENST00000529430 CPDO75976 1380 aa14.79□□□□□ -0.04
CLP1-203ENST00000529430 ROBO1Q9Y6N7 1651 aa14.78□□□□□ -0.04
CLP1-203ENST00000529430 UBAP1LF5GYI3 381 aa14.78□□□□□ -0.04
CLP1-203ENST00000529430 IL27Q8NEV9 243 aa14.78□□□□□ -0.04
CLP1-203ENST00000529430 PRDM11Q9NQV5 511 aa14.78□□□□□ -0.04
CLP1-203ENST00000529430 PIP4K2BP78356 416 aa14.78□□□□□ -0.04
CLP1-203ENST00000529430 CSB-PGBD3P0DP91 1061 aa14.77□□□□□ -0.05
CLP1-203ENST00000529430 SLC4A3P48751 1232 aa14.77□□□□□ -0.05
CLP1-203ENST00000529430 BABAM1Q9NWV8 329 aa14.77□□□□□ -0.05
CLP1-203ENST00000529430 DLG5Q8TDM6 1919 aa14.77□□□□□ -0.05
CLP1-203ENST00000529430 SOS1Q07889 1333 aaPredicted RBP14.76□□□□□ -0.05
CLP1-203ENST00000529430 ABCC6O95255 1503 aa14.76□□□□□ -0.05
CLP1-203ENST00000529430 EIF5BO60841 1220 aaKnown RBP14.76□□□□□ -0.05
CLP1-203ENST00000529430 TSPYL4Q9UJ04 414 aa14.76□□□□□ -0.05
CLP1-203ENST00000529430 AHDC1Q5TGY3 1603 aaPredicted RBP14.76□□□□□ -0.05
CLP1-203ENST00000529430 ERBB3P21860 1342 aa14.76□□□□□ -0.05
CLP1-203ENST00000529430 ANKRD45Q5TZF3 282 aa14.75□□□□□ -0.05
CLP1-203ENST00000529430 NBPF6Q5VWK0 638 aa14.75□□□□□ -0.05
CLP1-203ENST00000529430 NBPF4Q96M43 638 aa14.75□□□□□ -0.05
CLP1-203ENST00000529430 AXIN2Q9Y2T1 843 aa14.75□□□□□ -0.05
CLP1-203ENST00000529430 RPAP2Q8IXW5 612 aaPredicted RBP14.75□□□□□ -0.05
CLP1-203ENST00000529430 GNAT3A8MTJ3 354 aa14.74□□□□□ -0.05
CLP1-203ENST00000529430 CHRNA2Q15822 529 aa14.74□□□□□ -0.05
CLP1-203ENST00000529430 BMP2KLQ5H9B9 411 aa14.74□□□□□ -0.05
CLP1-203ENST00000529430 USHBP1Q8N6Y0 703 aa14.74□□□□□ -0.05
CLP1-203ENST00000529430 LNPKQ9C0E8 428 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms